RNA–Protein interactions for RNA: ENST00000369729.7

SFR1-202, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFR1, Length 1,503 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-202ENST00000369729 NEURL4Q96JN8 1562 aa12.62□□□□□ -0.39
SFR1-202ENST00000369729 PPP1R15AO75807 674 aaPredicted RBP12.62□□□□□ -0.39
SFR1-202ENST00000369729 RGL3Q3MIN7 710 aa12.62□□□□□ -0.39
SFR1-202ENST00000369729 ZNF326Q5BKZ1 582 aaKnown RBP12.62□□□□□ -0.39
SFR1-202ENST00000369729 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
SFR1-202ENST00000369729 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
SFR1-202ENST00000369729 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
SFR1-202ENST00000369729 IDI1Q13907 227 aa12.61□□□□□ -0.39
SFR1-202ENST00000369729 CLTCL1P53675 1640 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 MADDQ8WXG6 1647 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 KIF1BO60333 1816 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 CFAP65Q6ZU64 1925 aaKnown RBP12.6□□□□□ -0.39
SFR1-202ENST00000369729 NLRP1Q9C000 1473 aa12.6□□□□□ -0.39
SFR1-202ENST00000369729 SYNMO15061 1565 aa12.59□□□□□ -0.39
SFR1-202ENST00000369729 RIMS1Q86UR5 1692 aaKnown RBP12.59□□□□□ -0.39
SFR1-202ENST00000369729 CEBPAP49715 358 aaPredicted RBP12.58□□□□□ -0.4
SFR1-202ENST00000369729 SPATA31E1Q6ZUB1 1445 aa12.58□□□□□ -0.4
SFR1-202ENST00000369729 C3P01024 1663 aa12.58□□□□□ -0.4
SFR1-202ENST00000369729 PIK3C2BO00750 1634 aa12.58□□□□□ -0.4
SFR1-202ENST00000369729 FOXD4L1Q9NU39 408 aa12.57□□□□□ -0.4
SFR1-202ENST00000369729 VGFO15240 615 aaPredicted RBP12.57□□□□□ -0.4
SFR1-202ENST00000369729 KDM2AQ9Y2K7 1162 aa12.57□□□□□ -0.4
SFR1-202ENST00000369729 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
SFR1-202ENST00000369729 ADGRB3O60242 1522 aa12.56□□□□□ -0.4
SFR1-202ENST00000369729 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.56□□□□□ -0.4
SFR1-202ENST00000369729 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
SFR1-202ENST00000369729 PTPRMP28827 1452 aa12.55□□□□□ -0.4
SFR1-202ENST00000369729 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
SFR1-202ENST00000369729 UHRF1BP1Q6BDS2 1440 aa12.53□□□□□ -0.4
SFR1-202ENST00000369729 KDM5AP29375 1690 aaKnown RBP12.52□□□□□ -0.4
SFR1-202ENST00000369729 MYOM2P54296 1465 aa12.52□□□□□ -0.41
SFR1-202ENST00000369729 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.41
SFR1-202ENST00000369729 EID1Q9Y6B2 187 aa12.52□□□□□ -0.41
SFR1-202ENST00000369729 A2ML1A8K2U0 1454 aa12.51□□□□□ -0.41
SFR1-202ENST00000369729 SP7Q8TDD2 431 aaPredicted RBP12.51□□□□□ -0.41
SFR1-202ENST00000369729 SETD1BQ9UPS6 1966 aaKnown RBP12.51□□□□□ -0.41
SFR1-202ENST00000369729 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
SFR1-202ENST00000369729 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
SFR1-202ENST00000369729 PRAG1Q86YV5 1406 aa12.49□□□□□ -0.41
SFR1-202ENST00000369729 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
SFR1-202ENST00000369729 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
SFR1-202ENST00000369729 TMEM2Q9UHN6 1383 aa12.48□□□□□ -0.41
SFR1-202ENST00000369729 MYO3AQ8NEV4 1616 aa12.48□□□□□ -0.41
SFR1-202ENST00000369729 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
SFR1-202ENST00000369729 ROCK2O75116 1388 aaKnown RBP12.47□□□□□ -0.41
SFR1-202ENST00000369729 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
SFR1-202ENST00000369729 KDM4FA0A1W2PPD8 638 aa12.47□□□□□ -0.41
SFR1-202ENST00000369729 NEXMIFQ5QGS0 1516 aa12.46□□□□□ -0.41
SFR1-202ENST00000369729 RALGAPBQ86X10 1494 aa12.46□□□□□ -0.41
SFR1-202ENST00000369729 UBR1Q8IWV7 1749 aa12.46□□□□□ -0.42
SFR1-202ENST00000369729 EIF4G2P78344 907 aaKnown RBP eCLIP12.46□□□□□ -0.42
SFR1-202ENST00000369729 BCANQ96GW7 911 aa12.46□□□□□ -0.42
SFR1-202ENST00000369729 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.42
SFR1-202ENST00000369729 PPLO60437 1756 aa12.46□□□□□ -0.42
SFR1-202ENST00000369729 ADGRF5Q8IZF2 1346 aa12.45□□□□□ -0.42
SFR1-202ENST00000369729 TXNDC2Q86VQ3 553 aa12.45□□□□□ -0.42
SFR1-202ENST00000369729 IFT172Q9UG01 1749 aa12.45□□□□□ -0.42
SFR1-202ENST00000369729 NRXN1Q9ULB1 1477 aa12.44□□□□□ -0.42
SFR1-202ENST00000369729 ANKLE2Q86XL3 938 aa12.44□□□□□ -0.42
SFR1-202ENST00000369729 ZNF142P52746 1687 aaPredicted RBP12.44□□□□□ -0.42
SFR1-202ENST00000369729 PIK3C2GO75747 1445 aa12.43□□□□□ -0.42
SFR1-202ENST00000369729 C14orf93Q9H972 538 aaKnown RBP12.43□□□□□ -0.42
SFR1-202ENST00000369729 SLIT1O75093 1534 aa12.43□□□□□ -0.42
SFR1-202ENST00000369729 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
SFR1-202ENST00000369729 NUTM2DQ5VT03 806 aaPredicted RBP12.42□□□□□ -0.42
SFR1-202ENST00000369729 KIAA1210Q9ULL0 1709 aa12.42□□□□□ -0.42
SFR1-202ENST00000369729 EIF3AQ14152 1382 aaKnown RBP12.42□□□□□ -0.42
SFR1-202ENST00000369729 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
SFR1-202ENST00000369729 ARHGAP23Q9P227 1491 aa12.42□□□□□ -0.42
SFR1-202ENST00000369729 ZBTB22O15209 634 aa12.42□□□□□ -0.42
SFR1-202ENST00000369729 GPRASP1Q5JY77 1395 aa12.41□□□□□ -0.42
SFR1-202ENST00000369729 LAMC1P11047 1609 aa12.41□□□□□ -0.42
SFR1-202ENST00000369729 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
SFR1-202ENST00000369729 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
SFR1-202ENST00000369729 PLEKHG1Q9ULL1 1385 aa12.4□□□□□ -0.42
SFR1-202ENST00000369729 ZNF316A6NFI3 1004 aaPredicted RBP12.4□□□□□ -0.42
SFR1-202ENST00000369729 PITPNM1O00562 1244 aa12.4□□□□□ -0.42
SFR1-202ENST00000369729 SCAF11Q99590 1463 aaKnown RBP12.39□□□□□ -0.43
SFR1-202ENST00000369729 USP47Q96K76 1375 aa12.39□□□□□ -0.43
SFR1-202ENST00000369729 SETBP1Q9Y6X0 1596 aa12.39□□□□□ -0.43
SFR1-202ENST00000369729 NBPF1Q3BBV0 1214 aa12.38□□□□□ -0.43
SFR1-202ENST00000369729 LTKP29376 864 aa12.37□□□□□ -0.43
SFR1-202ENST00000369729 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
SFR1-202ENST00000369729 TBX22Q9Y458 520 aa12.36□□□□□ -0.43
SFR1-202ENST00000369729 FXR2P51116 673 aaKnown RBP eCLIP12.35□□□□□ -0.43
SFR1-202ENST00000369729 ALKQ9UM73 1620 aa12.35□□□□□ -0.43
SFR1-202ENST00000369729 DIP2AQ14689 1571 aa12.35□□□□□ -0.43
SFR1-202ENST00000369729 TMEM132EQ6IEE7 984 aa12.33□□□□□ -0.44
SFR1-202ENST00000369729 PIK3R4Q99570 1358 aa12.33□□□□□ -0.44
SFR1-202ENST00000369729 HAX1O00165 279 aa12.32□□□□□ -0.44
SFR1-202ENST00000369729 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
SFR1-202ENST00000369729 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
SFR1-202ENST00000369729 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
SFR1-202ENST00000369729 POGKQ9P215 609 aa12.32□□□□□ -0.44
SFR1-202ENST00000369729 TRAK1Q9UPV9 953 aa12.32□□□□□ -0.44
SFR1-202ENST00000369729 MED14O60244 1454 aa12.31□□□□□ -0.44
SFR1-202ENST00000369729 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
SFR1-202ENST00000369729 LRPPRCP42704 1394 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms