RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 TET3O43151 1660 aa17.97■□□□□ 0.47
ECM1-202ENST00000369047 POLR3GLQ9BT43 218 aa17.97■□□□□ 0.47
ECM1-202ENST00000369047 E9PCH4 1651 aa17.97■□□□□ 0.47
ECM1-202ENST00000369047 PTPRTO14522 1441 aa17.96■□□□□ 0.47
ECM1-202ENST00000369047 FAM9BQ8IZU0 186 aa17.96■□□□□ 0.47
ECM1-202ENST00000369047 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
ECM1-202ENST00000369047 TRPM2O94759 1503 aa17.95■□□□□ 0.46
ECM1-202ENST00000369047 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
ECM1-202ENST00000369047 RALBP1Q15311 655 aa17.92■□□□□ 0.46
ECM1-202ENST00000369047 NBPF1Q3BBV0 1214 aa17.92■□□□□ 0.46
ECM1-202ENST00000369047 SPHKAPQ2M3C7 1700 aa17.92■□□□□ 0.46
ECM1-202ENST00000369047 SETD1BQ9UPS6 1966 aaKnown RBP17.92■□□□□ 0.46
ECM1-202ENST00000369047 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
ECM1-202ENST00000369047 NEURL4Q96JN8 1562 aa17.91■□□□□ 0.46
ECM1-202ENST00000369047 PLPPR3Q6T4P5 718 aa17.91■□□□□ 0.46
ECM1-202ENST00000369047 CEBPAP49715 358 aaPredicted RBP17.91■□□□□ 0.46
ECM1-202ENST00000369047 SPATA31D1Q6ZQQ2 1576 aa17.9■□□□□ 0.46
ECM1-202ENST00000369047 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
ECM1-202ENST00000369047 ERVK-7P63135 1459 aa17.89■□□□□ 0.45
ECM1-202ENST00000369047 TNRQ92752 1358 aa17.89■□□□□ 0.45
ECM1-202ENST00000369047 BRD4O60885 1362 aaPredicted RBP17.86■□□□□ 0.45
ECM1-202ENST00000369047 TESK2Q96S53 571 aa17.86■□□□□ 0.45
ECM1-202ENST00000369047 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
ECM1-202ENST00000369047 NLRP1Q9C000 1473 aa17.86■□□□□ 0.45
ECM1-202ENST00000369047 MYBBP1AQ9BQG0 1328 aaKnown RBP17.86■□□□□ 0.45
ECM1-202ENST00000369047 TMC1Q8TDI8 760 aa17.86■□□□□ 0.45
ECM1-202ENST00000369047 TMF1P82094 1093 aa17.85■□□□□ 0.45
ECM1-202ENST00000369047 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
ECM1-202ENST00000369047 PNISRQ8TF01 805 aaKnown RBP17.84■□□□□ 0.45
ECM1-202ENST00000369047 ZNF142P52746 1687 aaPredicted RBP17.84■□□□□ 0.45
ECM1-202ENST00000369047 BCANQ96GW7 911 aa17.84■□□□□ 0.45
ECM1-202ENST00000369047 NOS1P29475 1434 aa17.83■□□□□ 0.44
ECM1-202ENST00000369047 FBXO31Q5XUX0 539 aaPredicted RBP17.83■□□□□ 0.44
ECM1-202ENST00000369047 A2ML1A8K2U0 1454 aa17.81■□□□□ 0.44
ECM1-202ENST00000369047 PER1O15534 1290 aaPredicted RBP17.81■□□□□ 0.44
ECM1-202ENST00000369047 KIAA1210Q9ULL0 1709 aa17.81■□□□□ 0.44
ECM1-202ENST00000369047 CEP170BQ9Y4F5 1589 aaPredicted RBP17.81■□□□□ 0.44
ECM1-202ENST00000369047 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
ECM1-202ENST00000369047 IQGAP1P46940 1657 aa17.8■□□□□ 0.44
ECM1-202ENST00000369047 SLC52A1Q9NWF4 448 aa17.79■□□□□ 0.44
ECM1-202ENST00000369047 CFAP65Q6ZU64 1925 aaKnown RBP17.79■□□□□ 0.44
ECM1-202ENST00000369047 SLC24A1O60721 1099 aa17.79■□□□□ 0.44
ECM1-202ENST00000369047 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
ECM1-202ENST00000369047 LRPPRCP42704 1394 aaKnown RBP17.79■□□□□ 0.44
ECM1-202ENST00000369047 DISP3Q9P2K9 1392 aa17.79■□□□□ 0.44
ECM1-202ENST00000369047 LMTK3Q96Q04 1460 aa17.78■□□□□ 0.44
ECM1-202ENST00000369047 SYNMO15061 1565 aa17.78■□□□□ 0.44
ECM1-202ENST00000369047 SCAF11Q99590 1463 aaKnown RBP17.78■□□□□ 0.44
ECM1-202ENST00000369047 NLRP13Q86W25 1043 aa17.78■□□□□ 0.44
ECM1-202ENST00000369047 SMG6Q86US8 1419 aaKnown RBP17.77■□□□□ 0.44
ECM1-202ENST00000369047 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
ECM1-202ENST00000369047 KIF1BO60333 1816 aa17.77■□□□□ 0.43
ECM1-202ENST00000369047 MYOM2P54296 1465 aa17.76■□□□□ 0.43
ECM1-202ENST00000369047 CNGB1Q14028 1251 aaPredicted RBP17.76■□□□□ 0.43
ECM1-202ENST00000369047 TSHZ2Q9NRE2 1034 aa17.76■□□□□ 0.43
ECM1-202ENST00000369047 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
ECM1-202ENST00000369047 UGGT1Q9NYU2 1555 aa17.75■□□□□ 0.43
ECM1-202ENST00000369047 PIK3C2BO00750 1634 aa17.75■□□□□ 0.43
ECM1-202ENST00000369047 PANK3Q9H999 370 aa17.73■□□□□ 0.43
ECM1-202ENST00000369047 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
ECM1-202ENST00000369047 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
ECM1-202ENST00000369047 INSRP06213 1382 aa17.73■□□□□ 0.43
ECM1-202ENST00000369047 ADGRB3O60242 1522 aa17.72■□□□□ 0.43
ECM1-202ENST00000369047 NUDCQ9Y266 331 aa17.71■□□□□ 0.43
ECM1-202ENST00000369047 UBR1Q8IWV7 1749 aa17.71■□□□□ 0.43
ECM1-202ENST00000369047 PPP4R2Q9NY27 417 aa17.71■□□□□ 0.43
ECM1-202ENST00000369047 IFT172Q9UG01 1749 aa17.7■□□□□ 0.42
ECM1-202ENST00000369047 IDI1Q13907 227 aa17.7■□□□□ 0.42
ECM1-202ENST00000369047 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
ECM1-202ENST00000369047 HDGFP51858 240 aaKnown RBP17.66■□□□□ 0.42
ECM1-202ENST00000369047 RNF123Q5XPI4 1314 aa17.66■□□□□ 0.42
ECM1-202ENST00000369047 TMEM131LA2VDJ0 1609 aa17.66■□□□□ 0.42
ECM1-202ENST00000369047 RPGRIP1LQ68CZ1 1315 aa17.65■□□□□ 0.42
ECM1-202ENST00000369047 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
ECM1-202ENST00000369047 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
ECM1-202ENST00000369047 SLIT1O75093 1534 aa17.65■□□□□ 0.42
ECM1-202ENST00000369047 HSPA2P54652 639 aa17.64■□□□□ 0.41
ECM1-202ENST00000369047 IRX6P78412 446 aaPredicted RBP17.64■□□□□ 0.41
ECM1-202ENST00000369047 CC2D1BQ5T0F9 858 aaKnown RBP17.64■□□□□ 0.41
ECM1-202ENST00000369047 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
ECM1-202ENST00000369047 DMRT2Q9Y5R5 561 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 ADGRF5Q8IZF2 1346 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 EID1Q9Y6B2 187 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 NPC1L1Q9UHC9 1359 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
ECM1-202ENST00000369047 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
ECM1-202ENST00000369047 ANKLE2Q86XL3 938 aa17.62■□□□□ 0.41
ECM1-202ENST00000369047 TMEM2Q9UHN6 1383 aa17.62■□□□□ 0.41
ECM1-202ENST00000369047 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.61■□□□□ 0.41
ECM1-202ENST00000369047 SBNO2Q9Y2G9 1366 aa17.61■□□□□ 0.41
ECM1-202ENST00000369047 MYO5BQ9ULV0 1848 aa17.59■□□□□ 0.41
ECM1-202ENST00000369047 PPLO60437 1756 aa17.59■□□□□ 0.41
ECM1-202ENST00000369047 ASXL1Q8IXJ9 1541 aa17.58■□□□□ 0.41
ECM1-202ENST00000369047 STRCQ7RTU9 1775 aa17.58■□□□□ 0.4
ECM1-202ENST00000369047 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
ECM1-202ENST00000369047 RIMS2Q9UQ26 1411 aa17.58■□□□□ 0.4
ECM1-202ENST00000369047 C14orf93Q9H972 538 aaKnown RBP17.57■□□□□ 0.4
ECM1-202ENST00000369047 BLMP54132 1417 aaPredicted RBP17.57■□□□□ 0.4
ECM1-202ENST00000369047 MYOM1P52179 1685 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms