RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 NEXMIFQ5QGS0 1516 aa7.17□□□□□ -1.26
CTSS-201ENST00000368985 COL16A1Q07092 1604 aaPredicted RBP7.16□□□□□ -1.26
CTSS-201ENST00000368985 ZNF644Q9H582 1327 aaPredicted RBP7.15□□□□□ -1.26
CTSS-201ENST00000368985 CLTCL1P53675 1640 aa7.15□□□□□ -1.26
CTSS-201ENST00000368985 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.15□□□□□ -1.26
CTSS-201ENST00000368985 MARF1Q9Y4F3 1742 aaKnown RBP7.15□□□□□ -1.27
CTSS-201ENST00000368985 ANKLE2Q86XL3 938 aa7.15□□□□□ -1.27
CTSS-201ENST00000368985 KIAA1210Q9ULL0 1709 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 ROBO1Q9Y6N7 1651 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.14□□□□□ -1.27
CTSS-201ENST00000368985 KIF1AQ12756 1690 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 WASHC2CQ9Y4E1 1318 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 HFM1A2PYH4 1435 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 PTCH1Q13635 1447 aa7.14□□□□□ -1.27
CTSS-201ENST00000368985 ADGRB2O60241 1585 aa7.13□□□□□ -1.27
CTSS-201ENST00000368985 CDC42BPGQ6DT37 1551 aa7.13□□□□□ -1.27
CTSS-201ENST00000368985 TRIM26Q12899 539 aaPredicted RBP7.13□□□□□ -1.27
CTSS-201ENST00000368985 NALCNQ8IZF0 1738 aa7.13□□□□□ -1.27
CTSS-201ENST00000368985 CDK12Q9NYV4 1490 aaPredicted RBP7.13□□□□□ -1.27
CTSS-201ENST00000368985 PHLPP1O60346 1717 aa7.13□□□□□ -1.27
CTSS-201ENST00000368985 NRXN1Q9ULB1 1477 aa7.12□□□□□ -1.27
CTSS-201ENST00000368985 KIF3BO15066 747 aa7.12□□□□□ -1.27
CTSS-201ENST00000368985 CEBPAP49715 358 aaPredicted RBP7.12□□□□□ -1.27
CTSS-201ENST00000368985 TECPR2O15040 1411 aa7.11□□□□□ -1.27
CTSS-201ENST00000368985 FAM50AQ14320 339 aaKnown RBP7.11□□□□□ -1.27
CTSS-201ENST00000368985 ADAMTS13Q76LX8 1427 aa7.11□□□□□ -1.27
CTSS-201ENST00000368985 HSPA2P54652 639 aa7.11□□□□□ -1.27
CTSS-201ENST00000368985 KANK4Q5T7N3 995 aaPredicted RBP7.11□□□□□ -1.27
CTSS-201ENST00000368985 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTSS-201ENST00000368985 MYOM2P54296 1465 aa7.1□□□□□ -1.27
CTSS-201ENST00000368985 DLC1Q96QB1 1528 aa7.1□□□□□ -1.27
CTSS-201ENST00000368985 HDGFP51858 240 aaKnown RBP7.1□□□□□ -1.27
CTSS-201ENST00000368985 ZNF777Q9ULD5 760 aaPredicted RBP7.1□□□□□ -1.27
CTSS-201ENST00000368985 RIMS2Q9UQ26 1411 aa7.09□□□□□ -1.27
CTSS-201ENST00000368985 MLECQ14165 292 aa7.09□□□□□ -1.27
CTSS-201ENST00000368985 FMN2Q9NZ56 1722 aa7.09□□□□□ -1.27
CTSS-201ENST00000368985 RPGRIP1LQ68CZ1 1315 aa7.08□□□□□ -1.28
CTSS-201ENST00000368985 NCKAP5LQ9HCH0 1330 aa7.08□□□□□ -1.28
CTSS-201ENST00000368985 KCNA6P17658 529 aa7.08□□□□□ -1.28
CTSS-201ENST00000368985 TBX22Q9Y458 520 aa7.08□□□□□ -1.28
CTSS-201ENST00000368985 NAIPQ13075 1403 aa7.08□□□□□ -1.28
CTSS-201ENST00000368985 TOM1O60784 492 aa7.07□□□□□ -1.28
CTSS-201ENST00000368985 CCER1Q8TC90 406 aaPredicted RBP7.07□□□□□ -1.28
CTSS-201ENST00000368985 GGT6Q6P531 493 aa7.07□□□□□ -1.28
CTSS-201ENST00000368985 CFAP65Q6ZU64 1925 aaKnown RBP7.06□□□□□ -1.28
CTSS-201ENST00000368985 ADRA2BP18089 450 aa7.06□□□□□ -1.28
CTSS-201ENST00000368985 ZNF335Q9H4Z2 1342 aaPredicted RBP7.05□□□□□ -1.28
CTSS-201ENST00000368985 SETD5Q9C0A6 1442 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 NWD2Q9ULI1 1742 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 CRYBG1Q9Y4K1 1723 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 EID1Q9Y6B2 187 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 ITSN1Q15811 1721 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 ABCA3Q99758 1704 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 HRCP23327 699 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 USP54Q70EL1 1684 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 MST1RQ04912 1400 aa7.05□□□□□ -1.28
CTSS-201ENST00000368985 MYT1LQ9UL68 1186 aa7.04□□□□□ -1.28
CTSS-201ENST00000368985 ASXL1Q8IXJ9 1541 aa7.04□□□□□ -1.28
CTSS-201ENST00000368985 ADGRL3Q9HAR2 1447 aa7.04□□□□□ -1.28
CTSS-201ENST00000368985 SIRT1Q96EB6 747 aa7.03□□□□□ -1.28
CTSS-201ENST00000368985 TOPAZ1Q8N9V7 1692 aa7.03□□□□□ -1.28
CTSS-201ENST00000368985 FBXO31Q5XUX0 539 aaPredicted RBP7.03□□□□□ -1.28
CTSS-201ENST00000368985 STAC3Q96MF2 364 aa7.03□□□□□ -1.28
CTSS-201ENST00000368985 SPATA31E1Q6ZUB1 1445 aa7.03□□□□□ -1.28
CTSS-201ENST00000368985 SOCS7O14512 581 aa7.02□□□□□ -1.29
CTSS-201ENST00000368985 CHIC2Q9UKJ5 165 aa7.02□□□□□ -1.29
CTSS-201ENST00000368985 SPATA31A6Q5VVP1 1343 aa7.01□□□□□ -1.29
CTSS-201ENST00000368985 MSH6P52701 1360 aa7□□□□□ -1.29
CTSS-201ENST00000368985 TRPM3Q9HCF6 1732 aaPredicted RBP7□□□□□ -1.29
CTSS-201ENST00000368985 LTKP29376 864 aa7□□□□□ -1.29
CTSS-201ENST00000368985 ANKRD30BQ9BXX2 1392 aa7□□□□□ -1.29
CTSS-201ENST00000368985 IDI1Q13907 227 aa7□□□□□ -1.29
CTSS-201ENST00000368985 PIK3C2GO75747 1445 aa7□□□□□ -1.29
CTSS-201ENST00000368985 PTPRUQ92729 1446 aa7□□□□□ -1.29
CTSS-201ENST00000368985 JCADQ9P266 1359 aa6.99□□□□□ -1.29
CTSS-201ENST00000368985 RGPD3A6NKT7 1758 aaPredicted RBP6.99□□□□□ -1.29
CTSS-201ENST00000368985 RGPD4Q7Z3J3 1758 aa6.99□□□□□ -1.29
CTSS-201ENST00000368985 ALS2Q96Q42 1657 aa6.99□□□□□ -1.29
CTSS-201ENST00000368985 ABCC6O95255 1503 aa6.99□□□□□ -1.29
CTSS-201ENST00000368985 TMEM94Q12767 1356 aa6.98□□□□□ -1.29
CTSS-201ENST00000368985 ANKARQ7Z5J8 1434 aa6.98□□□□□ -1.29
CTSS-201ENST00000368985 ARHGEF28Q8N1W1 1705 aaKnown RBP6.98□□□□□ -1.29
CTSS-201ENST00000368985 TXNDC2Q86VQ3 553 aa6.98□□□□□ -1.29
CTSS-201ENST00000368985 NRAPQ86VF7 1730 aa6.98□□□□□ -1.29
CTSS-201ENST00000368985 ADGRB1O14514 1584 aa6.97□□□□□ -1.29
CTSS-201ENST00000368985 RTN4Q9NQC3 1192 aaKnown RBP6.97□□□□□ -1.29
CTSS-201ENST00000368985 UBAP1LF5GYI3 381 aa6.97□□□□□ -1.29
CTSS-201ENST00000368985 RRP7BPQ9NSQ0 103 aa6.96□□□□□ -1.29
CTSS-201ENST00000368985 NUP155O75694 1391 aa6.96□□□□□ -1.3
CTSS-201ENST00000368985 PXDNQ92626 1479 aa6.96□□□□□ -1.3
CTSS-201ENST00000368985 USP32Q8NFA0 1604 aa6.96□□□□□ -1.3
CTSS-201ENST00000368985 ABCC11Q96J66 1382 aa6.95□□□□□ -1.3
CTSS-201ENST00000368985 WNK3Q9BYP7 1800 aa6.95□□□□□ -1.3
CTSS-201ENST00000368985 BRD4O60885 1362 aaPredicted RBP6.95□□□□□ -1.3
CTSS-201ENST00000368985 LRPPRCP42704 1394 aaKnown RBP6.95□□□□□ -1.3
CTSS-201ENST00000368985 EIF3AQ14152 1382 aaKnown RBP6.95□□□□□ -1.3
CTSS-201ENST00000368985 PLCH1Q4KWH8 1693 aa6.95□□□□□ -1.3
CTSS-201ENST00000368985 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
CTSS-201ENST00000368985 CADPS2Q86UW7 1296 aa6.94□□□□□ -1.3
CTSS-201ENST00000368985 TRIM52Q96A61 297 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms