RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 POGKQ9P215 609 aa20.2■□□□□ 0.82
SEMA6C-202ENST00000368912 DUOX2Q9NRD8 1548 aa20.19■□□□□ 0.82
SEMA6C-202ENST00000368912 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
SEMA6C-202ENST00000368912 GCC2Q8IWJ2 1684 aa20.16■□□□□ 0.82
SEMA6C-202ENST00000368912 PNNQ9H307 717 aaKnown RBP20.15■□□□□ 0.82
SEMA6C-202ENST00000368912 ERBINQ96RT1 1412 aa20.15■□□□□ 0.82
SEMA6C-202ENST00000368912 ARXQ96QS3 562 aa20.15■□□□□ 0.82
SEMA6C-202ENST00000368912 ARHGEF5Q12774 1597 aa20.14■□□□□ 0.81
SEMA6C-202ENST00000368912 TMF1P82094 1093 aa20.13■□□□□ 0.81
SEMA6C-202ENST00000368912 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
SEMA6C-202ENST00000368912 CCDC184Q52MB2 194 aa20.12■□□□□ 0.81
SEMA6C-202ENST00000368912 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
SEMA6C-202ENST00000368912 UGGT1Q9NYU2 1555 aa20.11■□□□□ 0.81
SEMA6C-202ENST00000368912 DNAJC5Q9H3Z4 198 aa20.11■□□□□ 0.81
SEMA6C-202ENST00000368912 RGS3P49796 1198 aa20.11■□□□□ 0.81
SEMA6C-202ENST00000368912 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
SEMA6C-202ENST00000368912 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
SEMA6C-202ENST00000368912 RTEL1-TNFRSF6BF6WH68 1400 aa20.09■□□□□ 0.81
SEMA6C-202ENST00000368912 CCER2I3L3R5 266 aa20.09■□□□□ 0.81
SEMA6C-202ENST00000368912 PANK3Q9H999 370 aa20.08■□□□□ 0.81
SEMA6C-202ENST00000368912 ADGBQ8N7X0 1667 aa20.08■□□□□ 0.81
SEMA6C-202ENST00000368912 CCDC7Q96M83 1385 aa20.08■□□□□ 0.8
SEMA6C-202ENST00000368912 ABCA9Q8IUA7 1624 aa20.07■□□□□ 0.8
SEMA6C-202ENST00000368912 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
SEMA6C-202ENST00000368912 PLA2R1Q13018 1463 aa20.07■□□□□ 0.8
SEMA6C-202ENST00000368912 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
SEMA6C-202ENST00000368912 SOX12O15370 315 aa20.06■□□□□ 0.8
SEMA6C-202ENST00000368912 COL17A1Q9UMD9 1497 aaPredicted RBP20.06■□□□□ 0.8
SEMA6C-202ENST00000368912 NFKBIBQ15653 356 aa20.05■□□□□ 0.8
SEMA6C-202ENST00000368912 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
SEMA6C-202ENST00000368912 NOS1P29475 1434 aa20.03■□□□□ 0.8
SEMA6C-202ENST00000368912 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
SEMA6C-202ENST00000368912 BBXQ8WY36 941 aaPredicted RBP20.03■□□□□ 0.8
SEMA6C-202ENST00000368912 CABP2Q9NPB3 220 aa20.02■□□□□ 0.8
SEMA6C-202ENST00000368912 PAXIP1Q6ZW49 1069 aaPredicted RBP20.02■□□□□ 0.8
SEMA6C-202ENST00000368912 TEX14Q8IWB6 1497 aa20.02■□□□□ 0.79
SEMA6C-202ENST00000368912 NEO1Q92859 1461 aa20.02■□□□□ 0.79
SEMA6C-202ENST00000368912 RRAGDQ9NQL2 400 aaPredicted RBP20.01■□□□□ 0.79
SEMA6C-202ENST00000368912 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
SEMA6C-202ENST00000368912 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
SEMA6C-202ENST00000368912 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
SEMA6C-202ENST00000368912 NPATQ14207 1427 aa20■□□□□ 0.79
SEMA6C-202ENST00000368912 TAF7LQ5H9L4 462 aa19.99■□□□□ 0.79
SEMA6C-202ENST00000368912 CROCC2H7BZ55 1655 aa19.99■□□□□ 0.79
SEMA6C-202ENST00000368912 PRKRIP1Q9H875 184 aaPredicted RBP19.98■□□□□ 0.79
SEMA6C-202ENST00000368912 SLC52A1Q9NWF4 448 aa19.97■□□□□ 0.79
SEMA6C-202ENST00000368912 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
SEMA6C-202ENST00000368912 CHMP4BQ9H444 224 aaKnown RBP19.97■□□□□ 0.79
SEMA6C-202ENST00000368912 SLC12A5Q9H2X9 1139 aa19.96■□□□□ 0.79
SEMA6C-202ENST00000368912 SLC4A3P48751 1232 aa19.96■□□□□ 0.79
SEMA6C-202ENST00000368912 ATP10AO60312 1499 aa19.95■□□□□ 0.78
SEMA6C-202ENST00000368912 NAP1L2Q9ULW6 460 aaPredicted RBP19.95■□□□□ 0.78
SEMA6C-202ENST00000368912 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.93■□□□□ 0.78
SEMA6C-202ENST00000368912 MLH3Q9UHC1 1453 aa19.93■□□□□ 0.78
SEMA6C-202ENST00000368912 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
SEMA6C-202ENST00000368912 ZBTB7CA1YPR0 619 aa19.92■□□□□ 0.78
SEMA6C-202ENST00000368912 ZMYM3Q14202 1370 aa19.92■□□□□ 0.78
SEMA6C-202ENST00000368912 MAST1Q9Y2H9 1570 aa19.92■□□□□ 0.78
SEMA6C-202ENST00000368912 EID1Q9Y6B2 187 aa19.92■□□□□ 0.78
SEMA6C-202ENST00000368912 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
SEMA6C-202ENST00000368912 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
SEMA6C-202ENST00000368912 NEUROD2Q15784 382 aa19.91■□□□□ 0.78
SEMA6C-202ENST00000368912 PRDM15P57071 1507 aaPredicted RBP19.9■□□□□ 0.78
SEMA6C-202ENST00000368912 DIP2BQ9P265 1576 aa19.89■□□□□ 0.77
SEMA6C-202ENST00000368912 HECW2Q9P2P5 1572 aa19.89■□□□□ 0.77
SEMA6C-202ENST00000368912 CDCA8Q53HL2 280 aa19.88■□□□□ 0.77
SEMA6C-202ENST00000368912 KIDINS220Q9ULH0 1771 aa19.88■□□□□ 0.77
SEMA6C-202ENST00000368912 LMOD2Q6P5Q4 547 aa19.88■□□□□ 0.77
SEMA6C-202ENST00000368912 CANXP27824 592 aaKnown RBP19.87■□□□□ 0.77
SEMA6C-202ENST00000368912 ARID3AQ99856 593 aa19.87■□□□□ 0.77
SEMA6C-202ENST00000368912 DDRGK1Q96HY6 314 aa19.86■□□□□ 0.77
SEMA6C-202ENST00000368912 AMER1Q5JTC6 1135 aaPredicted RBP19.86■□□□□ 0.77
SEMA6C-202ENST00000368912 ARAP3Q8WWN8 1544 aa19.85■□□□□ 0.77
SEMA6C-202ENST00000368912 HDGFP51858 240 aaKnown RBP19.85■□□□□ 0.77
SEMA6C-202ENST00000368912 TESK2Q96S53 571 aa19.85■□□□□ 0.77
SEMA6C-202ENST00000368912 PLXNC1O60486 1568 aa19.85■□□□□ 0.77
SEMA6C-202ENST00000368912 FRAT2O75474 233 aaPredicted RBP19.83■□□□□ 0.77
SEMA6C-202ENST00000368912 CNTLNQ9NXG0 1405 aa19.83■□□□□ 0.76
SEMA6C-202ENST00000368912 NCKAP5LQ9HCH0 1330 aa19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 C14orf93Q9H972 538 aaKnown RBP19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 PDE4AP27815 886 aa19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 ABCA6Q8N139 1617 aa19.82■□□□□ 0.76
SEMA6C-202ENST00000368912 EIF3AQ14152 1382 aaKnown RBP19.81■□□□□ 0.76
SEMA6C-202ENST00000368912 HSPA2P54652 639 aa19.81■□□□□ 0.76
SEMA6C-202ENST00000368912 WDR43Q15061 677 aaKnown RBP eCLIP19.81■□□□□ 0.76
SEMA6C-202ENST00000368912 CCDC146Q8IYE0 955 aa19.81■□□□□ 0.76
SEMA6C-202ENST00000368912 FBLN1P23142 703 aa19.8■□□□□ 0.76
SEMA6C-202ENST00000368912 GGNBP2Q9H3C7 697 aa19.8■□□□□ 0.76
SEMA6C-202ENST00000368912 ZHX1Q9UKY1 873 aaPredicted RBP19.79■□□□□ 0.76
SEMA6C-202ENST00000368912 INO80Q9ULG1 1556 aaPredicted RBP19.79■□□□□ 0.76
SEMA6C-202ENST00000368912 SPATA31E1Q6ZUB1 1445 aa19.79■□□□□ 0.76
SEMA6C-202ENST00000368912 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
SEMA6C-202ENST00000368912 TNRQ92752 1358 aa19.78■□□□□ 0.76
SEMA6C-202ENST00000368912 LTKP29376 864 aa19.78■□□□□ 0.76
SEMA6C-202ENST00000368912 PMFBP1Q8TBY8 1022 aa19.78■□□□□ 0.76
SEMA6C-202ENST00000368912 NUTM2GQ5VZR2 741 aa19.78■□□□□ 0.76
SEMA6C-202ENST00000368912 PDCL3Q9H2J4 239 aa19.78■□□□□ 0.76
SEMA6C-202ENST00000368912 CABP1Q9NZU7 370 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms