RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 LRRC7Q96NW7 1537 aa13.11□□□□□ -0.31
SNX27-201ENST00000368838 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
SNX27-201ENST00000368838 TOM1O60784 492 aa13.11□□□□□ -0.31
SNX27-201ENST00000368838 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
SNX27-201ENST00000368838 TXNDC2Q86VQ3 553 aa13.11□□□□□ -0.31
SNX27-201ENST00000368838 MED1Q15648 1581 aaPredicted RBP13.1□□□□□ -0.31
SNX27-201ENST00000368838 CLSPNQ9HAW4 1339 aa13.1□□□□□ -0.31
SNX27-201ENST00000368838 KANK1Q14678 1352 aa13.1□□□□□ -0.31
SNX27-201ENST00000368838 SLIT1O75093 1534 aa13.1□□□□□ -0.31
SNX27-201ENST00000368838 GCC2Q8IWJ2 1684 aa13.1□□□□□ -0.31
SNX27-201ENST00000368838 ARHGAP31Q2M1Z3 1444 aa13.1□□□□□ -0.31
SNX27-201ENST00000368838 ARHGAP23Q9P227 1491 aa13.09□□□□□ -0.31
SNX27-201ENST00000368838 EFCAB6Q5THR3 1501 aa13.09□□□□□ -0.31
SNX27-201ENST00000368838 SOCS7O14512 581 aa13.09□□□□□ -0.31
SNX27-201ENST00000368838 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
SNX27-201ENST00000368838 KDM5AP29375 1690 aaKnown RBP13.08□□□□□ -0.32
SNX27-201ENST00000368838 ROCK1Q13464 1354 aa13.08□□□□□ -0.32
SNX27-201ENST00000368838 HFM1A2PYH4 1435 aa13.07□□□□□ -0.32
SNX27-201ENST00000368838 LMTK2Q8IWU2 1503 aa13.07□□□□□ -0.32
SNX27-201ENST00000368838 TET3O43151 1660 aa13.06□□□□□ -0.32
SNX27-201ENST00000368838 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
SNX27-201ENST00000368838 IDI1Q13907 227 aa13.06□□□□□ -0.32
SNX27-201ENST00000368838 ADGRB3O60242 1522 aa13.05□□□□□ -0.32
SNX27-201ENST00000368838 EID1Q9Y6B2 187 aa13.05□□□□□ -0.32
SNX27-201ENST00000368838 E9PCH4 1651 aa13.05□□□□□ -0.32
SNX27-201ENST00000368838 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
SNX27-201ENST00000368838 SETD5Q9C0A6 1442 aa13.04□□□□□ -0.32
SNX27-201ENST00000368838 RBM33Q96EV2 1170 aaKnown RBP13.04□□□□□ -0.32
SNX27-201ENST00000368838 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
SNX27-201ENST00000368838 UNC13BO14795 1591 aa13.02□□□□□ -0.32
SNX27-201ENST00000368838 ITGAEP38570 1179 aa13.02□□□□□ -0.33
SNX27-201ENST00000368838 SLC26A8Q96RN1 970 aa13.02□□□□□ -0.33
SNX27-201ENST00000368838 NOS1P29475 1434 aa13.02□□□□□ -0.33
SNX27-201ENST00000368838 BCANQ96GW7 911 aa13.01□□□□□ -0.33
SNX27-201ENST00000368838 CHD2O14647 1828 aaKnown RBP13.01□□□□□ -0.33
SNX27-201ENST00000368838 TMEM131LA2VDJ0 1609 aa13□□□□□ -0.33
SNX27-201ENST00000368838 NAIPQ13075 1403 aa12.99□□□□□ -0.33
SNX27-201ENST00000368838 ROBO1Q9Y6N7 1651 aa12.99□□□□□ -0.33
SNX27-201ENST00000368838 IQGAP3Q86VI3 1631 aa12.98□□□□□ -0.33
SNX27-201ENST00000368838 TMEM94Q12767 1356 aa12.97□□□□□ -0.33
SNX27-201ENST00000368838 RAB3GAP2Q9H2M9 1393 aa12.97□□□□□ -0.33
SNX27-201ENST00000368838 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SNX27-201ENST00000368838 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
SNX27-201ENST00000368838 NWD1Q149M9 1564 aa12.96□□□□□ -0.33
SNX27-201ENST00000368838 CACNB1Q02641 598 aaPredicted RBP12.96□□□□□ -0.33
SNX27-201ENST00000368838 RPRD2Q5VT52 1461 aaKnown RBP12.96□□□□□ -0.33
SNX27-201ENST00000368838 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
SNX27-201ENST00000368838 DHX57Q6P158 1386 aaKnown RBP12.95□□□□□ -0.34
SNX27-201ENST00000368838 SPHKAPQ2M3C7 1700 aa12.94□□□□□ -0.34
SNX27-201ENST00000368838 KCNA6P17658 529 aa12.94□□□□□ -0.34
SNX27-201ENST00000368838 ZFYVE9O95405 1425 aa12.94□□□□□ -0.34
SNX27-201ENST00000368838 RIMS2Q9UQ26 1411 aa12.94□□□□□ -0.34
SNX27-201ENST00000368838 PHLPP1O60346 1717 aa12.94□□□□□ -0.34
SNX27-201ENST00000368838 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
SNX27-201ENST00000368838 SLC52A1Q9NWF4 448 aa12.93□□□□□ -0.34
SNX27-201ENST00000368838 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
SNX27-201ENST00000368838 CCER1Q8TC90 406 aaPredicted RBP12.91□□□□□ -0.34
SNX27-201ENST00000368838 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
SNX27-201ENST00000368838 NUP155O75694 1391 aa12.9□□□□□ -0.34
SNX27-201ENST00000368838 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
SNX27-201ENST00000368838 TIMELESSQ9UNS1 1208 aa12.89□□□□□ -0.35
SNX27-201ENST00000368838 PLEKHG1Q9ULL1 1385 aa12.89□□□□□ -0.35
SNX27-201ENST00000368838 KIF1BO60333 1816 aa12.89□□□□□ -0.35
SNX27-201ENST00000368838 FAM135BQ49AJ0 1406 aa12.88□□□□□ -0.35
SNX27-201ENST00000368838 MSH6P52701 1360 aa12.88□□□□□ -0.35
SNX27-201ENST00000368838 U3KPZ7 1027 aaPredicted RBP12.88□□□□□ -0.35
SNX27-201ENST00000368838 SETD1AO15047 1707 aaKnown RBP12.87□□□□□ -0.35
SNX27-201ENST00000368838 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
SNX27-201ENST00000368838 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
SNX27-201ENST00000368838 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
SNX27-201ENST00000368838 ADAMTS13Q76LX8 1427 aa12.86□□□□□ -0.35
SNX27-201ENST00000368838 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
SNX27-201ENST00000368838 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
SNX27-201ENST00000368838 HDGFP51858 240 aaKnown RBP12.84□□□□□ -0.35
SNX27-201ENST00000368838 SLAIN2Q9P270 581 aa12.84□□□□□ -0.35
SNX27-201ENST00000368838 COL16A1Q07092 1604 aaPredicted RBP12.84□□□□□ -0.35
SNX27-201ENST00000368838 TRPM2O94759 1503 aa12.83□□□□□ -0.36
SNX27-201ENST00000368838 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNX27-201ENST00000368838 TBX22Q9Y458 520 aa12.83□□□□□ -0.36
SNX27-201ENST00000368838 XRN1Q8IZH2 1706 aaKnown RBP12.82□□□□□ -0.36
SNX27-201ENST00000368838 PTPRUQ92729 1446 aa12.82□□□□□ -0.36
SNX27-201ENST00000368838 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
SNX27-201ENST00000368838 NALCNQ8IZF0 1738 aa12.8□□□□□ -0.36
SNX27-201ENST00000368838 POTEAQ6S8J7 498 aa12.8□□□□□ -0.36
SNX27-201ENST00000368838 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
SNX27-201ENST00000368838 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
SNX27-201ENST00000368838 SETBP1Q9Y6X0 1596 aa12.78□□□□□ -0.36
SNX27-201ENST00000368838 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
SNX27-201ENST00000368838 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
SNX27-201ENST00000368838 ATF3P18847 181 aa12.77□□□□□ -0.37
SNX27-201ENST00000368838 PPLO60437 1756 aa12.77□□□□□ -0.37
SNX27-201ENST00000368838 LRP6O75581 1613 aa12.76□□□□□ -0.37
SNX27-201ENST00000368838 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
SNX27-201ENST00000368838 TRIM52Q96A61 297 aa12.76□□□□□ -0.37
SNX27-201ENST00000368838 PIK3R4Q99570 1358 aa12.76□□□□□ -0.37
SNX27-201ENST00000368838 JCADQ9P266 1359 aa12.76□□□□□ -0.37
SNX27-201ENST00000368838 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
SNX27-201ENST00000368838 METP08581 1390 aa12.75□□□□□ -0.37
SNX27-201ENST00000368838 C19orf44Q9H6X5 657 aa12.75□□□□□ -0.37
SNX27-201ENST00000368838 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms