RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
TUBE1-201ENST00000368657 STAG3Q9UJ98 1225 aa17.09■□□□□ 0.33
TUBE1-201ENST00000368657 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
TUBE1-201ENST00000368657 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
TUBE1-201ENST00000368657 TET3O43151 1660 aa17.07■□□□□ 0.32
TUBE1-201ENST00000368657 KCNA4P22459 653 aa17.07■□□□□ 0.32
TUBE1-201ENST00000368657 LRP5O75197 1615 aa17.06■□□□□ 0.32
TUBE1-201ENST00000368657 ATF3P18847 181 aa17.05■□□□□ 0.32
TUBE1-201ENST00000368657 LRRC59Q96AG4 307 aaKnown RBP17.05■□□□□ 0.32
TUBE1-201ENST00000368657 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
TUBE1-201ENST00000368657 NWD1Q149M9 1564 aa17.05■□□□□ 0.32
TUBE1-201ENST00000368657 KDM5AP29375 1690 aaKnown RBP17.04■□□□□ 0.32
TUBE1-201ENST00000368657 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
TUBE1-201ENST00000368657 C14orf37Q86TY3 774 aa17.03■□□□□ 0.32
TUBE1-201ENST00000368657 BCANQ96GW7 911 aa17.03■□□□□ 0.32
TUBE1-201ENST00000368657 TRPC5Q9UL62 973 aaPredicted RBP17.03■□□□□ 0.32
TUBE1-201ENST00000368657 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
TUBE1-201ENST00000368657 CAMSAP2Q08AD1 1489 aa17.02■□□□□ 0.32
TUBE1-201ENST00000368657 TSPY4P0CV99 314 aa17.02■□□□□ 0.32
TUBE1-201ENST00000368657 TSPY10P0CW01 314 aa17.02■□□□□ 0.32
TUBE1-201ENST00000368657 YY1P25490 414 aa17.01■□□□□ 0.31
TUBE1-201ENST00000368657 SETD5Q9C0A6 1442 aa17.01■□□□□ 0.31
TUBE1-201ENST00000368657 BRINP3Q76B58 766 aa17■□□□□ 0.31
TUBE1-201ENST00000368657 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
TUBE1-201ENST00000368657 EP400Q96L91 3159 aa16.99■□□□□ 0.31
TUBE1-201ENST00000368657 USP21Q9UK80 565 aa16.98■□□□□ 0.31
TUBE1-201ENST00000368657 ARHGAP31Q2M1Z3 1444 aa16.97■□□□□ 0.31
TUBE1-201ENST00000368657 EHMT2Q96KQ7 1210 aa16.96■□□□□ 0.31
TUBE1-201ENST00000368657 FYCO1Q9BQS8 1478 aa16.96■□□□□ 0.31
TUBE1-201ENST00000368657 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.3
TUBE1-201ENST00000368657 IDI1Q13907 227 aa16.95■□□□□ 0.3
TUBE1-201ENST00000368657 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
TUBE1-201ENST00000368657 CHD2O14647 1828 aaKnown RBP16.94■□□□□ 0.3
TUBE1-201ENST00000368657 MTUS2Q5JR59 1369 aa16.94■□□□□ 0.3
TUBE1-201ENST00000368657 BLMP54132 1417 aaPredicted RBP16.94■□□□□ 0.3
TUBE1-201ENST00000368657 ADAMTS2O95450 1211 aa16.93■□□□□ 0.3
TUBE1-201ENST00000368657 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
TUBE1-201ENST00000368657 FNBP4Q8N3X1 1017 aaPredicted RBP16.93■□□□□ 0.3
TUBE1-201ENST00000368657 MROH1Q8NDA8 1641 aa16.92■□□□□ 0.3
TUBE1-201ENST00000368657 HRCP23327 699 aa16.92■□□□□ 0.3
TUBE1-201ENST00000368657 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
TUBE1-201ENST00000368657 TBX22Q9Y458 520 aa16.92■□□□□ 0.3
TUBE1-201ENST00000368657 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.92■□□□□ 0.3
TUBE1-201ENST00000368657 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
TUBE1-201ENST00000368657 DEFB132Q7Z7B7 95 aa16.9■□□□□ 0.3
TUBE1-201ENST00000368657 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
TUBE1-201ENST00000368657 ATRNO75882 1429 aa16.88■□□□□ 0.29
TUBE1-201ENST00000368657 CEP152O94986 1710 aa16.88■□□□□ 0.29
TUBE1-201ENST00000368657 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
TUBE1-201ENST00000368657 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
TUBE1-201ENST00000368657 PPP1R15AO75807 674 aaPredicted RBP16.87■□□□□ 0.29
TUBE1-201ENST00000368657 PLEKHG1Q9ULL1 1385 aa16.87■□□□□ 0.29
TUBE1-201ENST00000368657 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
TUBE1-201ENST00000368657 PSDA5PKW4 1024 aaPredicted RBP16.85■□□□□ 0.29
TUBE1-201ENST00000368657 SLC52A1Q9NWF4 448 aa16.84■□□□□ 0.29
TUBE1-201ENST00000368657 DCCP43146 1447 aa16.83■□□□□ 0.28
TUBE1-201ENST00000368657 GJD4Q96KN9 370 aaPredicted RBP16.83■□□□□ 0.28
TUBE1-201ENST00000368657 ARHGEF5Q12774 1597 aa16.82■□□□□ 0.28
TUBE1-201ENST00000368657 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
TUBE1-201ENST00000368657 PIK3R4Q99570 1358 aa16.82■□□□□ 0.28
TUBE1-201ENST00000368657 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
TUBE1-201ENST00000368657 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
TUBE1-201ENST00000368657 BCL9LQ86UU0 1499 aa16.78■□□□□ 0.28
TUBE1-201ENST00000368657 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
TUBE1-201ENST00000368657 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
TUBE1-201ENST00000368657 AMOTL2Q9Y2J4 779 aa16.77■□□□□ 0.28
TUBE1-201ENST00000368657 MST1RQ04912 1400 aa16.77■□□□□ 0.27
TUBE1-201ENST00000368657 ADGRB3O60242 1522 aa16.76■□□□□ 0.27
TUBE1-201ENST00000368657 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
TUBE1-201ENST00000368657 BAG6P46379 1132 aa16.76■□□□□ 0.27
TUBE1-201ENST00000368657 KANK1Q14678 1352 aa16.76■□□□□ 0.27
TUBE1-201ENST00000368657 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
TUBE1-201ENST00000368657 UNC13BO14795 1591 aa16.74■□□□□ 0.27
TUBE1-201ENST00000368657 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
TUBE1-201ENST00000368657 DUOX2Q9NRD8 1548 aa16.74■□□□□ 0.27
TUBE1-201ENST00000368657 RIMS2Q9UQ26 1411 aa16.72■□□□□ 0.27
TUBE1-201ENST00000368657 SOS2Q07890 1332 aaPredicted RBP16.71■□□□□ 0.27
TUBE1-201ENST00000368657 NOS1P29475 1434 aa16.71■□□□□ 0.27
TUBE1-201ENST00000368657 R3HDM1Q15032 1099 aaKnown RBP16.7■□□□□ 0.26
TUBE1-201ENST00000368657 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
TUBE1-201ENST00000368657 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
TUBE1-201ENST00000368657 UNC5CLQ8IV45 518 aa16.67■□□□□ 0.26
TUBE1-201ENST00000368657 SEPT12Q8IYM1 358 aa16.67■□□□□ 0.26
TUBE1-201ENST00000368657 LMTK2Q8IWU2 1503 aa16.66■□□□□ 0.26
TUBE1-201ENST00000368657 KRT27Q7Z3Y8 459 aa16.66■□□□□ 0.26
TUBE1-201ENST00000368657 ERBINQ96RT1 1412 aa16.66■□□□□ 0.26
TUBE1-201ENST00000368657 C1QTNF8P60827 252 aa16.65■□□□□ 0.26
TUBE1-201ENST00000368657 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-201ENST00000368657 ZNF784Q8NCA9 323 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-201ENST00000368657 RALGAPBQ86X10 1494 aa16.64■□□□□ 0.25
TUBE1-201ENST00000368657 TRPM2O94759 1503 aa16.64■□□□□ 0.25
TUBE1-201ENST00000368657 PTPRUQ92729 1446 aa16.63■□□□□ 0.25
TUBE1-201ENST00000368657 LAMC1P11047 1609 aa16.63■□□□□ 0.25
TUBE1-201ENST00000368657 RPRD2Q5VT52 1461 aaKnown RBP16.62■□□□□ 0.25
TUBE1-201ENST00000368657 BRWD3Q6RI45 1802 aa16.62■□□□□ 0.25
TUBE1-201ENST00000368657 EN1Q05925 392 aaPredicted RBP16.62■□□□□ 0.25
TUBE1-201ENST00000368657 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
TUBE1-201ENST00000368657 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-201ENST00000368657 RRP7BPQ9NSQ0 103 aa16.61■□□□□ 0.25
TUBE1-201ENST00000368657 GLI3P10071 1580 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms