RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 MAP3K4Q9Y6R4 1608 aa24.49■■□□□ 1.51
LMNA-207ENST00000368301 NPATQ14207 1427 aa24.48■■□□□ 1.51
LMNA-207ENST00000368301 NUDCQ9Y266 331 aa24.46■■□□□ 1.51
LMNA-207ENST00000368301 IFT172Q9UG01 1749 aa24.46■■□□□ 1.51
LMNA-207ENST00000368301 MYOM2P54296 1465 aa24.46■■□□□ 1.51
LMNA-207ENST00000368301 KIAA1210Q9ULL0 1709 aa24.45■■□□□ 1.51
LMNA-207ENST00000368301 CHGAP10645 457 aaKnown RBP24.45■■□□□ 1.5
LMNA-207ENST00000368301 WASHC2CQ9Y4E1 1318 aa24.44■■□□□ 1.5
LMNA-207ENST00000368301 NEO1Q92859 1461 aa24.44■■□□□ 1.5
LMNA-207ENST00000368301 CYB5RLQ6IPT4 315 aa24.42■■□□□ 1.5
LMNA-207ENST00000368301 ADGRB3O60242 1522 aa24.42■■□□□ 1.5
LMNA-207ENST00000368301 NOS1P29475 1434 aa24.41■■□□□ 1.5
LMNA-207ENST00000368301 ABCC3O15438 1527 aa24.41■■□□□ 1.5
LMNA-207ENST00000368301 SALL2Q9Y467 1007 aaPredicted RBP24.4■■□□□ 1.5
LMNA-207ENST00000368301 ERICH6BQ5W0A0 696 aa24.39■■□□□ 1.49
LMNA-207ENST00000368301 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.49
LMNA-207ENST00000368301 DIP2CQ9Y2E4 1556 aa24.38■■□□□ 1.49
LMNA-207ENST00000368301 PPP4R2Q9NY27 417 aa24.38■■□□□ 1.49
LMNA-207ENST00000368301 NRXN1Q9ULB1 1477 aa24.38■■□□□ 1.49
LMNA-207ENST00000368301 MYOM1P52179 1685 aa24.38■■□□□ 1.49
LMNA-207ENST00000368301 SYNMO15061 1565 aa24.37■■□□□ 1.49
LMNA-207ENST00000368301 AMER1Q5JTC6 1135 aaPredicted RBP24.36■■□□□ 1.49
LMNA-207ENST00000368301 KNSTRNQ9Y448 316 aa24.36■■□□□ 1.49
LMNA-207ENST00000368301 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
LMNA-207ENST00000368301 SIGLEC1Q9BZZ2 1709 aa24.35■■□□□ 1.49
LMNA-207ENST00000368301 CDCA8Q53HL2 280 aa24.35■■□□□ 1.49
LMNA-207ENST00000368301 YEATS2Q9ULM3 1422 aa24.34■■□□□ 1.49
LMNA-207ENST00000368301 CAMSAP1Q5T5Y3 1602 aa24.34■■□□□ 1.49
LMNA-207ENST00000368301 B4GALNT3Q6L9W6 998 aa24.34■■□□□ 1.49
LMNA-207ENST00000368301 ERVK-7P63135 1459 aa24.33■■□□□ 1.49
LMNA-207ENST00000368301 RNF123Q5XPI4 1314 aa24.32■■□□□ 1.48
LMNA-207ENST00000368301 PPLO60437 1756 aa24.31■■□□□ 1.48
LMNA-207ENST00000368301 KDM5AP29375 1690 aaKnown RBP24.31■■□□□ 1.48
LMNA-207ENST00000368301 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
LMNA-207ENST00000368301 PIK3C2GO75747 1445 aa24.29■■□□□ 1.48
LMNA-207ENST00000368301 NUTM2DQ5VT03 806 aaPredicted RBP24.28■■□□□ 1.48
LMNA-207ENST00000368301 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
LMNA-207ENST00000368301 TMEM132EQ6IEE7 984 aa24.27■■□□□ 1.48
LMNA-207ENST00000368301 BLMP54132 1417 aaPredicted RBP24.27■■□□□ 1.48
LMNA-207ENST00000368301 TRAK1Q9UPV9 953 aa24.27■■□□□ 1.48
LMNA-207ENST00000368301 RBM19Q9Y4C8 960 aaKnown RBP24.26■■□□□ 1.47
LMNA-207ENST00000368301 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
LMNA-207ENST00000368301 CDCA7LQ96GN5 454 aa24.25■■□□□ 1.47
LMNA-207ENST00000368301 RIMBP3CA6NJZ7 1639 aa24.25■■□□□ 1.47
LMNA-207ENST00000368301 RIMBP3BA6NNM3 1639 aa24.25■■□□□ 1.47
LMNA-207ENST00000368301 RIMBP3Q9UFD9 1639 aa24.25■■□□□ 1.47
LMNA-207ENST00000368301 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
LMNA-207ENST00000368301 ADAMTS8Q9UP79 889 aa24.24■■□□□ 1.47
LMNA-207ENST00000368301 SETBP1Q9Y6X0 1596 aa24.24■■□□□ 1.47
LMNA-207ENST00000368301 ADGRB1O14514 1584 aa24.23■■□□□ 1.47
LMNA-207ENST00000368301 PIK3C2BO00750 1634 aa24.23■■□□□ 1.47
LMNA-207ENST00000368301 CENPJQ9HC77 1338 aaPredicted RBP24.23■■□□□ 1.47
LMNA-207ENST00000368301 GLI2P10070 1586 aa24.23■■□□□ 1.47
LMNA-207ENST00000368301 FAM69CQ0P6D2 419 aa24.22■■□□□ 1.47
LMNA-207ENST00000368301 CARD14Q9BXL6 1004 aa24.22■■□□□ 1.47
LMNA-207ENST00000368301 RPGRIP1LQ68CZ1 1315 aa24.2■■□□□ 1.46
LMNA-207ENST00000368301 IDI1Q13907 227 aa24.19■■□□□ 1.46
LMNA-207ENST00000368301 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
LMNA-207ENST00000368301 INSRP06213 1382 aa24.19■■□□□ 1.46
LMNA-207ENST00000368301 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
LMNA-207ENST00000368301 ZMYM4Q5VZL5 1548 aa24.18■■□□□ 1.46
LMNA-207ENST00000368301 NEXMIFQ5QGS0 1516 aa24.18■■□□□ 1.46
LMNA-207ENST00000368301 ARHGAP31Q2M1Z3 1444 aa24.17■■□□□ 1.46
LMNA-207ENST00000368301 NPC1L1Q9UHC9 1359 aa24.17■■□□□ 1.46
LMNA-207ENST00000368301 QRICH2Q9H0J4 1663 aa24.16■■□□□ 1.46
LMNA-207ENST00000368301 PDE3BQ13370 1112 aa24.16■■□□□ 1.46
LMNA-207ENST00000368301 TSPOAP1O95153 1857 aa24.16■■□□□ 1.46
LMNA-207ENST00000368301 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
LMNA-207ENST00000368301 DIP2BQ9P265 1576 aa24.16■■□□□ 1.46
LMNA-207ENST00000368301 SLC24A1O60721 1099 aa24.16■■□□□ 1.46
LMNA-207ENST00000368301 RCAN3Q9UKA8 241 aa24.15■■□□□ 1.46
LMNA-207ENST00000368301 RRP1P56182 461 aaKnown RBP24.13■■□□□ 1.45
LMNA-207ENST00000368301 WDR43Q15061 677 aaKnown RBP eCLIP24.13■■□□□ 1.45
LMNA-207ENST00000368301 MYO5BQ9ULV0 1848 aa24.11■■□□□ 1.45
LMNA-207ENST00000368301 SLC12A5Q9H2X9 1139 aa24.11■■□□□ 1.45
LMNA-207ENST00000368301 VGFO15240 615 aaPredicted RBP24.1■■□□□ 1.45
LMNA-207ENST00000368301 FBXO31Q5XUX0 539 aaPredicted RBP24.1■■□□□ 1.45
LMNA-207ENST00000368301 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
LMNA-207ENST00000368301 PLEKHH1Q9ULM0 1364 aa24.09■■□□□ 1.45
LMNA-207ENST00000368301 CCDC136Q96JN2 1154 aa24.07■■□□□ 1.44
LMNA-207ENST00000368301 SLC52A1Q9NWF4 448 aa24.07■■□□□ 1.44
LMNA-207ENST00000368301 NSD3Q9BZ95 1437 aa24.06■■□□□ 1.44
LMNA-207ENST00000368301 CCDC146Q8IYE0 955 aa24.06■■□□□ 1.44
LMNA-207ENST00000368301 ARHGEF28Q8N1W1 1705 aaKnown RBP24.06■■□□□ 1.44
LMNA-207ENST00000368301 EXOC6Q8TAG9 804 aa24.05■■□□□ 1.44
LMNA-207ENST00000368301 SAFB2Q14151 953 aaKnown RBP eCLIP24.04■■□□□ 1.44
LMNA-207ENST00000368301 TMEM131LA2VDJ0 1609 aa24.04■■□□□ 1.44
LMNA-207ENST00000368301 TULP4Q9NRJ4 1543 aa24.03■■□□□ 1.44
LMNA-207ENST00000368301 STK26Q9P289 416 aa24.03■■□□□ 1.44
LMNA-207ENST00000368301 PLIN1O60240 522 aa24.02■■□□□ 1.44
LMNA-207ENST00000368301 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
LMNA-207ENST00000368301 ZNF521Q96K83 1311 aa24■■□□□ 1.43
LMNA-207ENST00000368301 ZFYVE9O95405 1425 aa24■■□□□ 1.43
LMNA-207ENST00000368301 CABP2Q9NPB3 220 aa23.99■■□□□ 1.43
LMNA-207ENST00000368301 EVC2Q86UK5 1308 aa23.96■■□□□ 1.43
LMNA-207ENST00000368301 APAF1O14727 1248 aa23.96■■□□□ 1.43
LMNA-207ENST00000368301 DUSP27Q5VZP5 1158 aa23.96■■□□□ 1.43
LMNA-207ENST00000368301 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
LMNA-207ENST00000368301 MLECQ14165 292 aa23.95■■□□□ 1.43
LMNA-207ENST00000368301 CLTCQ00610 1675 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms