RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 MAMSTRQ6ZN01 415 aa10.63□□□□□ -0.71
ECHDC1-202ENST00000368289 KIF27Q86VH2 1401 aa10.63□□□□□ -0.71
ECHDC1-202ENST00000368289 FOXK1P85037 733 aa10.62□□□□□ -0.71
ECHDC1-202ENST00000368289 C2orf72A6NCS6 295 aa10.61□□□□□ -0.71
ECHDC1-202ENST00000368289 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-202ENST00000368289 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
ECHDC1-202ENST00000368289 HECW1Q76N89 1606 aa10.6□□□□□ -0.71
ECHDC1-202ENST00000368289 KIF3CO14782 793 aa10.6□□□□□ -0.71
ECHDC1-202ENST00000368289 NBR1Q14596 966 aa10.6□□□□□ -0.71
ECHDC1-202ENST00000368289 SCUBE2Q9NQ36 999 aa10.59□□□□□ -0.71
ECHDC1-202ENST00000368289 TRAPPC8Q9Y2L5 1435 aa10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 SETD1AO15047 1707 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 TOM1O60784 492 aa10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 DSG2Q14126 1118 aa10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 ARHGEF1Q92888 912 aaKnown RBP10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 UPF1Q92900 1129 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■□□□□ 8
ECHDC1-202ENST00000368289 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
ECHDC1-202ENST00000368289 ATP10AO60312 1499 aa10.57□□□□□ -0.72
ECHDC1-202ENST00000368289 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
ECHDC1-202ENST00000368289 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
ECHDC1-202ENST00000368289 KCNV2Q8TDN2 545 aa10.57□□□□□ -0.72
ECHDC1-202ENST00000368289 C3P01024 1663 aa10.57□□□□□ -0.72
ECHDC1-202ENST00000368289 TMEM92Q6UXU6 159 aa10.56□□□□□ -0.72
ECHDC1-202ENST00000368289 TCOF1Q13428 1488 aaKnown RBP10.55□□□□□ -0.72
ECHDC1-202ENST00000368289 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
ECHDC1-202ENST00000368289 POTEB2H3BUK9 544 aa10.53□□□□□ -0.72
ECHDC1-202ENST00000368289 ARIH1Q9Y4X5 557 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-202ENST00000368289 RAPGEF2Q9Y4G8 1499 aa10.51□□□□□ -0.73
ECHDC1-202ENST00000368289 SCAPERQ9BY12 1400 aa10.5□□□□□ -0.73
ECHDC1-202ENST00000368289 POTEJP0CG39 1038 aa10.49□□□□□ -0.73
ECHDC1-202ENST00000368289 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
ECHDC1-202ENST00000368289 PLA2R1Q13018 1463 aa10.49□□□□□ -0.73
ECHDC1-202ENST00000368289 SHANK2Q9UPX8 1470 aa10.48□□□□□ -0.73
ECHDC1-202ENST00000368289 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.48□□□□□ -0.73
ECHDC1-202ENST00000368289 TBC1D12O60347 775 aa10.47□□□□□ -0.73
ECHDC1-202ENST00000368289 MAP3K9P80192 1104 aa10.46□□□□□ -0.73
ECHDC1-202ENST00000368289 CPS1P31327 1500 aa10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 PTPRKQ15262 1439 aa10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 TULP1O00294 542 aaPredicted RBP10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 SLC34A2O95436 690 aa10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 LHX8Q68G74 356 aa10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 EMILIN3Q9NT22 766 aa10.45□□□□□ -0.74
ECHDC1-202ENST00000368289 GOLGA3Q08378 1498 aa10.44□□□□□ -0.74
ECHDC1-202ENST00000368289 AFAP1Q8N556 730 aa10.44□□□□□ -0.74
ECHDC1-202ENST00000368289 VWDEQ8N2E2 1590 aa10.43□□□□□ -0.74
ECHDC1-202ENST00000368289 NPATQ14207 1427 aa10.43□□□□□ -0.74
ECHDC1-202ENST00000368289 NUP153P49790 1475 aaKnown RBP10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 DPYSL4O14531 572 aa10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 SNPHO15079 494 aa10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 OXER1Q8TDS5 423 aa10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 NEURL4Q96JN8 1562 aa10.42□□□□□ -0.74
ECHDC1-202ENST00000368289 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
ECHDC1-202ENST00000368289 RIMBP2O15034 1052 aa10.41□□□□□ -0.74
ECHDC1-202ENST00000368289 SMYD5Q6GMV2 418 aa10.41□□□□□ -0.74
ECHDC1-202ENST00000368289 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-202ENST00000368289 EP400Q96L91 3159 aa10.4□□□□□ -0.74
ECHDC1-202ENST00000368289 ZMYM3Q14202 1370 aa10.4□□□□□ -0.74
ECHDC1-202ENST00000368289 AGLP35573 1532 aa10.4□□□□□ -0.74
ECHDC1-202ENST00000368289 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-202ENST00000368289 CFAP74Q9C0B2 1584 aa10.39□□□□□ -0.75
ECHDC1-202ENST00000368289 PLCH2O75038 1416 aa10.39□□□□□ -0.75
ECHDC1-202ENST00000368289 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
ECHDC1-202ENST00000368289 LRRC7Q96NW7 1537 aa10.38□□□□□ -0.75
ECHDC1-202ENST00000368289 ZNF142P52746 1687 aaPredicted RBP10.38□□□□□ -0.75
ECHDC1-202ENST00000368289 PDIA6Q15084 440 aa10.38□□□□□ -0.75
ECHDC1-202ENST00000368289 CEP170BQ9Y4F5 1589 aaPredicted RBP10.38□□□□□ -0.75
ECHDC1-202ENST00000368289 KDM5CP41229 1560 aa10.37□□□□□ -0.75
ECHDC1-202ENST00000368289 STRCP1A6NGW2 1772 aa10.37□□□□□ -0.75
ECHDC1-202ENST00000368289 ABCA6Q8N139 1617 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 MYO3AQ8NEV4 1616 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 CNTLNQ9NXG0 1405 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 ZNF710Q8N1W2 664 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 OTUD5Q96G74 571 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
ECHDC1-202ENST00000368289 PLEKHD1A6NEE1 506 aa10.35□□□□□ -0.75
ECHDC1-202ENST00000368289 SEMA3EO15041 775 aa10.35□□□□□ -0.75
ECHDC1-202ENST00000368289 RAPGEF6Q8TEU7 1601 aa10.35□□□□□ -0.75
ECHDC1-202ENST00000368289 TESPA1A2RU30 521 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-202ENST00000368289 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
ECHDC1-202ENST00000368289 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
ECHDC1-202ENST00000368289 SETBP1Q9Y6X0 1596 aa10.34□□□□□ -0.75
ECHDC1-202ENST00000368289 EVI5O60447 810 aa10.33□□□□□ -0.76
ECHDC1-202ENST00000368289 DNMT1P26358 1616 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-202ENST00000368289 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
ECHDC1-202ENST00000368289 ZNF518AQ6AHZ1 1483 aa10.32□□□□□ -0.76
ECHDC1-202ENST00000368289 MLH3Q9UHC1 1453 aa10.31□□□□□ -0.76
ECHDC1-202ENST00000368289 HOXB3P14651 431 aaPredicted RBP10.31□□□□□ -0.76
ECHDC1-202ENST00000368289 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-202ENST00000368289 CEP350Q5VT06 3117 aa10.31□□□□□ -0.76
ECHDC1-202ENST00000368289 PTGER2P43116 358 aa10.3□□□□□ -0.76
ECHDC1-202ENST00000368289 ANO8Q9HCE9 1232 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-202ENST00000368289 MROH2AA6NES4 1674 aa10.3□□□□□ -0.76
ECHDC1-202ENST00000368289 FAM135BQ49AJ0 1406 aa10.3□□□□□ -0.76
ECHDC1-202ENST00000368289 A2ML1A8K2U0 1454 aa10.3□□□□□ -0.76
ECHDC1-202ENST00000368289 IFFO2Q5TF58 517 aa10.29□□□□□ -0.76
ECHDC1-202ENST00000368289 EFCAB2Q5VUJ9 269 aa10.29□□□□□ -0.76
ECHDC1-202ENST00000368289 RNF17Q9BXT8 1623 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms