RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TET3O43151 1660 aa14.74□□□□□ -0.05
CD48-202ENST00000368046 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
CD48-202ENST00000368046 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
CD48-202ENST00000368046 HDGFP51858 240 aaKnown RBP14.73□□□□□ -0.05
CD48-202ENST00000368046 MED14O60244 1454 aa14.73□□□□□ -0.05
CD48-202ENST00000368046 IQGAP3Q86VI3 1631 aa14.73□□□□□ -0.05
CD48-202ENST00000368046 ZNF335Q9H4Z2 1342 aaPredicted RBP14.72□□□□□ -0.05
CD48-202ENST00000368046 SLC4A1APQ9BWU0 796 aaKnown RBP14.72□□□□□ -0.05
CD48-202ENST00000368046 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
CD48-202ENST00000368046 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.05
CD48-202ENST00000368046 SYNMO15061 1565 aa14.71□□□□□ -0.05
CD48-202ENST00000368046 ARHGAP23Q9P227 1491 aa14.7□□□□□ -0.06
CD48-202ENST00000368046 POLA2Q14181 598 aa14.7□□□□□ -0.06
CD48-202ENST00000368046 SLIT1O75093 1534 aa14.7□□□□□ -0.06
CD48-202ENST00000368046 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
CD48-202ENST00000368046 GCC2Q8IWJ2 1684 aa14.69□□□□□ -0.06
CD48-202ENST00000368046 PIK3C2BO00750 1634 aa14.69□□□□□ -0.06
CD48-202ENST00000368046 SCAF11Q99590 1463 aaKnown RBP14.68□□□□□ -0.06
CD48-202ENST00000368046 E9PCH4 1651 aa14.68□□□□□ -0.06
CD48-202ENST00000368046 SETD5Q9C0A6 1442 aa14.67□□□□□ -0.06
CD48-202ENST00000368046 LTBP4Q8N2S1 1624 aa14.67□□□□□ -0.06
CD48-202ENST00000368046 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
CD48-202ENST00000368046 NEURL4Q96JN8 1562 aa14.67□□□□□ -0.06
CD48-202ENST00000368046 MPHOSPH9Q99550 1183 aa14.66□□□□□ -0.06
CD48-202ENST00000368046 KDM5AP29375 1690 aaKnown RBP14.65□□□□□ -0.06
CD48-202ENST00000368046 HRCP23327 699 aa14.65□□□□□ -0.06
CD48-202ENST00000368046 BCANQ96GW7 911 aa14.64□□□□□ -0.07
CD48-202ENST00000368046 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
CD48-202ENST00000368046 ADGRB3O60242 1522 aa14.63□□□□□ -0.07
CD48-202ENST00000368046 PPP1R15AO75807 674 aaPredicted RBP14.63□□□□□ -0.07
CD48-202ENST00000368046 SLC26A8Q96RN1 970 aa14.63□□□□□ -0.07
CD48-202ENST00000368046 ZNF326Q5BKZ1 582 aaKnown RBP14.62□□□□□ -0.07
CD48-202ENST00000368046 RIMS2Q9UQ26 1411 aa14.62□□□□□ -0.07
CD48-202ENST00000368046 ZFYVE9O95405 1425 aa14.6□□□□□ -0.07
CD48-202ENST00000368046 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
CD48-202ENST00000368046 NUTM2DQ5VT03 806 aaPredicted RBP14.6□□□□□ -0.07
CD48-202ENST00000368046 TBX22Q9Y458 520 aa14.6□□□□□ -0.07
CD48-202ENST00000368046 IQSEC2Q5JU85 1478 aa14.6□□□□□ -0.07
CD48-202ENST00000368046 RAB3GAP2Q9H2M9 1393 aa14.6□□□□□ -0.07
CD48-202ENST00000368046 IQGAP1P46940 1657 aa14.59□□□□□ -0.07
CD48-202ENST00000368046 KCNA6P17658 529 aa14.59□□□□□ -0.07
CD48-202ENST00000368046 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
CD48-202ENST00000368046 CPS1P31327 1500 aa14.58□□□□□ -0.08
CD48-202ENST00000368046 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
CD48-202ENST00000368046 TRPM2O94759 1503 aa14.56□□□□□ -0.08
CD48-202ENST00000368046 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
CD48-202ENST00000368046 VGFO15240 615 aaPredicted RBP14.55□□□□□ -0.08
CD48-202ENST00000368046 RPGRIP1LQ68CZ1 1315 aa14.55□□□□□ -0.08
CD48-202ENST00000368046 TOM1O60784 492 aa14.54□□□□□ -0.08
CD48-202ENST00000368046 AKT1S1Q96B36 256 aa14.54□□□□□ -0.08
CD48-202ENST00000368046 PROSER2Q86WR7 435 aaPredicted RBP14.53□□□□□ -0.08
CD48-202ENST00000368046 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
CD48-202ENST00000368046 CCDC144AA2RUR9 1427 aa14.51□□□□□ -0.09
CD48-202ENST00000368046 RGL3Q3MIN7 710 aa14.51□□□□□ -0.09
CD48-202ENST00000368046 CLTCL1P53675 1640 aa14.51□□□□□ -0.09
CD48-202ENST00000368046 ADAMTS13Q76LX8 1427 aa14.5□□□□□ -0.09
CD48-202ENST00000368046 MYO5BQ9ULV0 1848 aa14.5□□□□□ -0.09
CD48-202ENST00000368046 PIK3R4Q99570 1358 aa14.49□□□□□ -0.09
CD48-202ENST00000368046 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
CD48-202ENST00000368046 AMOTL2Q9Y2J4 779 aa14.48□□□□□ -0.09
CD48-202ENST00000368046 PIP4K2BP78356 416 aa14.47□□□□□ -0.09
CD48-202ENST00000368046 RBM33Q96EV2 1170 aaKnown RBP14.47□□□□□ -0.09
CD48-202ENST00000368046 STRCP1A6NGW2 1772 aa14.47□□□□□ -0.09
CD48-202ENST00000368046 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
CD48-202ENST00000368046 HAX1O00165 279 aa14.46□□□□□ -0.09
CD48-202ENST00000368046 KIF1BO60333 1816 aa14.45□□□□□ -0.1
CD48-202ENST00000368046 NEXMIFQ5QGS0 1516 aa14.45□□□□□ -0.1
CD48-202ENST00000368046 ANKRD30BQ9BXX2 1392 aa14.45□□□□□ -0.1
CD48-202ENST00000368046 SPATA31E1Q6ZUB1 1445 aa14.44□□□□□ -0.1
CD48-202ENST00000368046 MYCNP04198 464 aaPredicted RBP14.44□□□□□ -0.1
CD48-202ENST00000368046 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
CD48-202ENST00000368046 METP08581 1390 aa14.43□□□□□ -0.1
CD48-202ENST00000368046 NKTRP30414 1462 aaKnown RBP14.43□□□□□ -0.1
CD48-202ENST00000368046 DIP2AQ14689 1571 aa14.43□□□□□ -0.1
CD48-202ENST00000368046 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
CD48-202ENST00000368046 NCOA3Q9Y6Q9 1424 aa14.42□□□□□ -0.1
CD48-202ENST00000368046 REM2Q8IYK8 340 aaPredicted RBP14.42□□□□□ -0.1
CD48-202ENST00000368046 SETBP1Q9Y6X0 1596 aa14.42□□□□□ -0.1
CD48-202ENST00000368046 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
CD48-202ENST00000368046 C19orf44Q9H6X5 657 aa14.41□□□□□ -0.1
CD48-202ENST00000368046 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
CD48-202ENST00000368046 MSH6P52701 1360 aa14.4□□□□□ -0.1
CD48-202ENST00000368046 C14orf37Q86TY3 774 aa14.4□□□□□ -0.1
CD48-202ENST00000368046 CHD2O14647 1828 aaKnown RBP14.4□□□□□ -0.1
CD48-202ENST00000368046 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
CD48-202ENST00000368046 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
CD48-202ENST00000368046 HSPA1LP34931 641 aa14.38□□□□□ -0.11
CD48-202ENST00000368046 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
CD48-202ENST00000368046 NRXN3Q9Y4C0 1643 aa14.37□□□□□ -0.11
CD48-202ENST00000368046 ATF3P18847 181 aa14.36□□□□□ -0.11
CD48-202ENST00000368046 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
CD48-202ENST00000368046 C14orf93Q9H972 538 aaKnown RBP14.36□□□□□ -0.11
CD48-202ENST00000368046 FAM135BQ49AJ0 1406 aa14.35□□□□□ -0.11
CD48-202ENST00000368046 ALKQ9UM73 1620 aa14.35□□□□□ -0.11
CD48-202ENST00000368046 KDM2AQ9Y2K7 1162 aa14.35□□□□□ -0.11
CD48-202ENST00000368046 TMEM132EQ6IEE7 984 aa14.34□□□□□ -0.11
CD48-202ENST00000368046 XIRP1Q702N8 1843 aaKnown RBP14.34□□□□□ -0.11
CD48-202ENST00000368046 PPLO60437 1756 aa14.33□□□□□ -0.12
CD48-202ENST00000368046 CFAP70Q5T0N1 1121 aa14.33□□□□□ -0.12
CD48-202ENST00000368046 STK26Q9P289 416 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms