RNA–Protein interactions for RNA: ENST00000366987.6

ATF3-206, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-206ENST00000366987 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
ATF3-206ENST00000366987 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
ATF3-206ENST00000366987 SYCP2Q9BX26 1530 aa12.99□□□□□ -0.33
ATF3-206ENST00000366987 CROCC2H7BZ55 1655 aa12.98□□□□□ -0.33
ATF3-206ENST00000366987 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
ATF3-206ENST00000366987 ISY1Q9ULR0 285 aaKnown RBP12.98□□□□□ -0.33
ATF3-206ENST00000366987 MCCP23508 829 aa12.97□□□□□ -0.33
ATF3-206ENST00000366987 IRX6P78412 446 aaPredicted RBP12.97□□□□□ -0.33
ATF3-206ENST00000366987 FAM50AQ14320 339 aaKnown RBP12.97□□□□□ -0.33
ATF3-206ENST00000366987 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
ATF3-206ENST00000366987 CCDC141Q6ZP82 1450 aa12.96□□□□□ -0.33
ATF3-206ENST00000366987 TPRNQ4KMQ1 711 aa12.96□□□□□ -0.33
ATF3-206ENST00000366987 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
ATF3-206ENST00000366987 CCDC9Q9Y3X0 531 aaKnown RBP12.96□□□□□ -0.33
ATF3-206ENST00000366987 ZNF644Q9H582 1327 aaPredicted RBP12.96□□□□□ -0.34
ATF3-206ENST00000366987 SCAPERQ9BY12 1400 aa12.95□□□□□ -0.34
ATF3-206ENST00000366987 DENND4BO75064 1496 aaPredicted RBP12.95□□□□□ -0.34
ATF3-206ENST00000366987 MBD5Q9P267 1494 aa12.95□□□□□ -0.34
ATF3-206ENST00000366987 ESPNB1AK53 854 aa12.95□□□□□ -0.34
ATF3-206ENST00000366987 RICTORQ6R327 1708 aa12.95□□□□□ -0.34
ATF3-206ENST00000366987 ZNF518AQ6AHZ1 1483 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 POGZQ7Z3K3 1410 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 POTEDQ86YR6 584 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 YY1AP1Q9H869 796 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 CLSTN1O94985 981 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 FAM193AP78312 1265 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 FOXD1Q16676 465 aa12.94□□□□□ -0.34
ATF3-206ENST00000366987 ADGBQ8N7X0 1667 aa12.93□□□□□ -0.34
ATF3-206ENST00000366987 DAPK1P53355 1430 aa12.93□□□□□ -0.34
ATF3-206ENST00000366987 DNTTIP2Q5QJE6 756 aaKnown RBP12.93□□□□□ -0.34
ATF3-206ENST00000366987 DNAJC2Q99543 621 aaKnown RBP12.93□□□□□ -0.34
ATF3-206ENST00000366987 KDM5CP41229 1560 aa12.93□□□□□ -0.34
ATF3-206ENST00000366987 MAST1Q9Y2H9 1570 aa12.93□□□□□ -0.34
ATF3-206ENST00000366987 PHF14O94880 888 aa12.92□□□□□ -0.34
ATF3-206ENST00000366987 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.92□□□□□ -0.34
ATF3-206ENST00000366987 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
ATF3-206ENST00000366987 KDM6BO15054 1643 aa12.92□□□□□ -0.34
ATF3-206ENST00000366987 ZSCAN20P17040 1043 aaPredicted RBP12.92□□□□□ -0.34
ATF3-206ENST00000366987 PDE4AP27815 886 aa12.92□□□□□ -0.34
ATF3-206ENST00000366987 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATF3-206ENST00000366987 HNRNPUQ00839 825 aaKnown RBP eCLIP12.92□□□□□ -0.34
ATF3-206ENST00000366987 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.92□□□□□ -0.34
ATF3-206ENST00000366987 ABCC5O15440 1437 aa12.91□□□□□ -0.34
ATF3-206ENST00000366987 TRAPPC8Q9Y2L5 1435 aa12.91□□□□□ -0.34
ATF3-206ENST00000366987 RNF123Q5XPI4 1314 aa12.91□□□□□ -0.34
ATF3-206ENST00000366987 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
ATF3-206ENST00000366987 FRMPD1Q5SYB0 1578 aa12.91□□□□□ -0.34
ATF3-206ENST00000366987 CEP120Q8N960 986 aa12.9□□□□□ -0.34
ATF3-206ENST00000366987 HECW2Q9P2P5 1572 aa12.9□□□□□ -0.34
ATF3-206ENST00000366987 INO80Q9ULG1 1556 aaPredicted RBP12.9□□□□□ -0.34
ATF3-206ENST00000366987 FSD2A1L4K1 749 aa12.9□□□□□ -0.35
ATF3-206ENST00000366987 TSPY4P0CV99 314 aa12.9□□□□□ -0.35
ATF3-206ENST00000366987 TSPY10P0CW01 314 aa12.9□□□□□ -0.35
ATF3-206ENST00000366987 KIAA1211Q6ZU35 1233 aa12.9□□□□□ -0.35
ATF3-206ENST00000366987 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
ATF3-206ENST00000366987 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
ATF3-206ENST00000366987 CCDC94Q9BW85 323 aaPredicted RBP12.89□□□□□ -0.35
ATF3-206ENST00000366987 RTEL1-TNFRSF6BF6WH68 1400 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 KCNG1Q9UIX4 513 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 PLXNC1O60486 1568 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 ADGRL2O95490 1459 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 MAGI2Q86UL8 1455 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 PSEN1P49768 467 aa12.88□□□□□ -0.35
ATF3-206ENST00000366987 ATP7AQ04656 1500 aa12.87□□□□□ -0.35
ATF3-206ENST00000366987 DYNC1I1O14576 645 aa12.87□□□□□ -0.35
ATF3-206ENST00000366987 OFD1O75665 1012 aa12.87□□□□□ -0.35
ATF3-206ENST00000366987 SPAG9O60271 1321 aaKnown RBP12.87□□□□□ -0.35
ATF3-206ENST00000366987 KIDINS220Q9ULH0 1771 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 VGLL3A8MV65 326 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 MRE11P49959 708 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
ATF3-206ENST00000366987 GEMIN8Q9NWZ8 242 aaKnown RBP12.86□□□□□ -0.35
ATF3-206ENST00000366987 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 ROCK1Q13464 1354 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 COL17A1Q9UMD9 1497 aaPredicted RBP12.86□□□□□ -0.35
ATF3-206ENST00000366987 APPP05067 770 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 RIPK4P57078 832 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 AFAP1Q8N556 730 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 TSPYL1Q9H0U9 437 aa12.86□□□□□ -0.35
ATF3-206ENST00000366987 RAPGEF3O95398 923 aa12.85□□□□□ -0.35
ATF3-206ENST00000366987 ANKRD30AQ9BXX3 1397 aa12.85□□□□□ -0.35
ATF3-206ENST00000366987 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
ATF3-206ENST00000366987 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
ATF3-206ENST00000366987 PLCD4Q9BRC7 762 aa12.84□□□□□ -0.35
ATF3-206ENST00000366987 GCC2Q8IWJ2 1684 aa12.84□□□□□ -0.35
ATF3-206ENST00000366987 XRCC6P12956 609 aaKnown RBP eCLIP12.84□□□□□ -0.35
ATF3-206ENST00000366987 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.36
ATF3-206ENST00000366987 NCOA1Q15788 1441 aa12.82□□□□□ -0.36
ATF3-206ENST00000366987 SMG6Q86US8 1419 aaKnown RBP12.82□□□□□ -0.36
ATF3-206ENST00000366987 RALBP1Q15311 655 aa12.82□□□□□ -0.36
ATF3-206ENST00000366987 ABCA6Q8N139 1617 aa12.82□□□□□ -0.36
ATF3-206ENST00000366987 DIP2CQ9Y2E4 1556 aa12.81□□□□□ -0.36
ATF3-206ENST00000366987 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
ATF3-206ENST00000366987 CHIC2Q9UKJ5 165 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms