RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
MRPL55-211ENST00000366738 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
MRPL55-211ENST00000366738 ERBINQ96RT1 1412 aa12.63□□□□□ -0.39
MRPL55-211ENST00000366738 ADGRB3O60242 1522 aa12.63□□□□□ -0.39
MRPL55-211ENST00000366738 IDI1Q13907 227 aa12.63□□□□□ -0.39
MRPL55-211ENST00000366738 MEX3CQ5U5Q3 659 aaKnown RBP12.61□□□□□ -0.39
MRPL55-211ENST00000366738 CHIC2Q9UKJ5 165 aa12.61□□□□□ -0.39
MRPL55-211ENST00000366738 BCANQ96GW7 911 aa12.6□□□□□ -0.39
MRPL55-211ENST00000366738 KANK1Q14678 1352 aa12.59□□□□□ -0.39
MRPL55-211ENST00000366738 LMTK2Q8IWU2 1503 aa12.59□□□□□ -0.39
MRPL55-211ENST00000366738 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
MRPL55-211ENST00000366738 ZNF772Q68DY9 489 aaPredicted RBP12.59□□□□□ -0.39
MRPL55-211ENST00000366738 CHD2O14647 1828 aaKnown RBP12.59□□□□□ -0.39
MRPL55-211ENST00000366738 SPATA31A6Q5VVP1 1343 aa12.59□□□□□ -0.39
MRPL55-211ENST00000366738 NOS1P29475 1434 aa12.58□□□□□ -0.4
MRPL55-211ENST00000366738 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
MRPL55-211ENST00000366738 MYO5BQ9ULV0 1848 aa12.57□□□□□ -0.4
MRPL55-211ENST00000366738 ZFYVE9O95405 1425 aa12.56□□□□□ -0.4
MRPL55-211ENST00000366738 ADGRL2O95490 1459 aa12.56□□□□□ -0.4
MRPL55-211ENST00000366738 ANKRD30AQ9BXX3 1397 aa12.56□□□□□ -0.4
MRPL55-211ENST00000366738 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.55□□□□□ -0.4
MRPL55-211ENST00000366738 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
MRPL55-211ENST00000366738 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
MRPL55-211ENST00000366738 PLEKHG1Q9ULL1 1385 aa12.55□□□□□ -0.4
MRPL55-211ENST00000366738 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
MRPL55-211ENST00000366738 RXRBP28702 533 aa12.54□□□□□ -0.4
MRPL55-211ENST00000366738 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
MRPL55-211ENST00000366738 CDK12Q9NYV4 1490 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-211ENST00000366738 NUTM2BA6NNL0 878 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-211ENST00000366738 NUTM2EB1AL46 878 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-211ENST00000366738 PPP1R15AO75807 674 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-211ENST00000366738 NUTM2AQ8IVF1 878 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-211ENST00000366738 FAM50AQ14320 339 aaKnown RBP12.52□□□□□ -0.41
MRPL55-211ENST00000366738 RGS12O14924 1447 aa12.52□□□□□ -0.41
MRPL55-211ENST00000366738 SLC52A1Q9NWF4 448 aa12.51□□□□□ -0.41
MRPL55-211ENST00000366738 AFF2P51816 1311 aa12.51□□□□□ -0.41
MRPL55-211ENST00000366738 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
MRPL55-211ENST00000366738 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
MRPL55-211ENST00000366738 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
MRPL55-211ENST00000366738 RRBP1Q9P2E9 1410 aaKnown RBP12.49□□□□□ -0.41
MRPL55-211ENST00000366738 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
MRPL55-211ENST00000366738 ATF3P18847 181 aa12.49□□□□□ -0.41
MRPL55-211ENST00000366738 NUTM2DQ5VT03 806 aaPredicted RBP12.49□□□□□ -0.41
MRPL55-211ENST00000366738 BRINP3Q76B58 766 aa12.49□□□□□ -0.41
MRPL55-211ENST00000366738 CADPS2Q86UW7 1296 aa12.49□□□□□ -0.41
MRPL55-211ENST00000366738 ASXL1Q8IXJ9 1541 aa12.48□□□□□ -0.41
MRPL55-211ENST00000366738 C19orf44Q9H6X5 657 aa12.48□□□□□ -0.41
MRPL55-211ENST00000366738 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
MRPL55-211ENST00000366738 RPRD2Q5VT52 1461 aaKnown RBP12.47□□□□□ -0.41
MRPL55-211ENST00000366738 NHSL1Q5SYE7 1610 aa12.46□□□□□ -0.41
MRPL55-211ENST00000366738 UNC13BO14795 1591 aa12.46□□□□□ -0.42
MRPL55-211ENST00000366738 PTPRUQ92729 1446 aa12.45□□□□□ -0.42
MRPL55-211ENST00000366738 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
MRPL55-211ENST00000366738 C8orf37Q96NL8 207 aa12.45□□□□□ -0.42
MRPL55-211ENST00000366738 SETD5Q9C0A6 1442 aa12.45□□□□□ -0.42
MRPL55-211ENST00000366738 TRPM2O94759 1503 aa12.44□□□□□ -0.42
MRPL55-211ENST00000366738 MST1RQ04912 1400 aa12.44□□□□□ -0.42
MRPL55-211ENST00000366738 PIK3R4Q99570 1358 aa12.43□□□□□ -0.42
MRPL55-211ENST00000366738 E9PCH4 1651 aa12.43□□□□□ -0.42
MRPL55-211ENST00000366738 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
MRPL55-211ENST00000366738 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
MRPL55-211ENST00000366738 DDX17Q92841 729 aaKnown RBP12.43□□□□□ -0.42
MRPL55-211ENST00000366738 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
MRPL55-211ENST00000366738 AMOTL2Q9Y2J4 779 aa12.43□□□□□ -0.42
MRPL55-211ENST00000366738 DCCP43146 1447 aa12.43□□□□□ -0.42
MRPL55-211ENST00000366738 EP400Q96L91 3159 aa12.42□□□□□ -0.42
MRPL55-211ENST00000366738 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.42□□□□□ -0.42
MRPL55-211ENST00000366738 XRN1Q8IZH2 1706 aaKnown RBP12.42□□□□□ -0.42
MRPL55-211ENST00000366738 ROCK1Q13464 1354 aa12.42□□□□□ -0.42
MRPL55-211ENST00000366738 PNPLA6Q8IY17 1366 aa12.42□□□□□ -0.42
MRPL55-211ENST00000366738 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
MRPL55-211ENST00000366738 SETBP1Q9Y6X0 1596 aa12.4□□□□□ -0.42
MRPL55-211ENST00000366738 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
MRPL55-211ENST00000366738 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
MRPL55-211ENST00000366738 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
MRPL55-211ENST00000366738 ITGAEP38570 1179 aa12.39□□□□□ -0.43
MRPL55-211ENST00000366738 LRRC59Q96AG4 307 aaKnown RBP12.39□□□□□ -0.43
MRPL55-211ENST00000366738 NALCNQ8IZF0 1738 aa12.37□□□□□ -0.43
MRPL55-211ENST00000366738 NGLY1Q96IV0 654 aa12.37□□□□□ -0.43
MRPL55-211ENST00000366738 NUP155O75694 1391 aa12.36□□□□□ -0.43
MRPL55-211ENST00000366738 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
MRPL55-211ENST00000366738 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
MRPL55-211ENST00000366738 METP08581 1390 aa12.34□□□□□ -0.43
MRPL55-211ENST00000366738 USP21Q9UK80 565 aa12.34□□□□□ -0.43
MRPL55-211ENST00000366738 ATRNO75882 1429 aa12.32□□□□□ -0.44
MRPL55-211ENST00000366738 LAMC1P11047 1609 aa12.32□□□□□ -0.44
MRPL55-211ENST00000366738 C1orf167Q5SNV9 1468 aa12.32□□□□□ -0.44
MRPL55-211ENST00000366738 TRIM26Q12899 539 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-211ENST00000366738 TRPC5Q9UL62 973 aaPredicted RBP12.31□□□□□ -0.44
MRPL55-211ENST00000366738 SPHKAPQ2M3C7 1700 aa12.3□□□□□ -0.44
MRPL55-211ENST00000366738 PTCH1Q13635 1447 aa12.29□□□□□ -0.44
MRPL55-211ENST00000366738 FOXD1Q16676 465 aa12.29□□□□□ -0.44
MRPL55-211ENST00000366738 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
MRPL55-211ENST00000366738 SOS2Q07890 1332 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-211ENST00000366738 COL22A1Q8NFW1 1626 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-211ENST00000366738 NAIPQ13075 1403 aa12.28□□□□□ -0.44
MRPL55-211ENST00000366738 ZNF326Q5BKZ1 582 aaKnown RBP12.28□□□□□ -0.44
MRPL55-211ENST00000366738 FNBP4Q8N3X1 1017 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-211ENST00000366738 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
MRPL55-211ENST00000366738 MYOM2P54296 1465 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms