RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 UBR1Q8IWV7 1749 aa17.38■□□□□ 0.37
CAPN9-203ENST00000366666 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
CAPN9-203ENST00000366666 DIEXFQ68CQ4 756 aaKnown RBP17.37■□□□□ 0.37
CAPN9-203ENST00000366666 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
CAPN9-203ENST00000366666 MYO3AQ8NEV4 1616 aa17.36■□□□□ 0.37
CAPN9-203ENST00000366666 PTPRMP28827 1452 aa17.36■□□□□ 0.37
CAPN9-203ENST00000366666 RALGAPBQ86X10 1494 aa17.36■□□□□ 0.37
CAPN9-203ENST00000366666 MYOM2P54296 1465 aa17.35■□□□□ 0.37
CAPN9-203ENST00000366666 CENPBP07199 599 aaPredicted RBP17.33■□□□□ 0.37
CAPN9-203ENST00000366666 NRXN1Q9ULB1 1477 aa17.33■□□□□ 0.36
CAPN9-203ENST00000366666 NLRP1Q9C000 1473 aa17.32■□□□□ 0.36
CAPN9-203ENST00000366666 KDM4FA0A1W2PPD8 638 aa17.32■□□□□ 0.36
CAPN9-203ENST00000366666 ZNF316A6NFI3 1004 aaPredicted RBP17.32■□□□□ 0.36
CAPN9-203ENST00000366666 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
CAPN9-203ENST00000366666 KDM5AP29375 1690 aaKnown RBP17.31■□□□□ 0.36
CAPN9-203ENST00000366666 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
CAPN9-203ENST00000366666 ROCK2O75116 1388 aaKnown RBP17.31■□□□□ 0.36
CAPN9-203ENST00000366666 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
CAPN9-203ENST00000366666 HSPA5P11021 654 aaKnown RBP17.29■□□□□ 0.36
CAPN9-203ENST00000366666 ZFYVE9O95405 1425 aa17.29■□□□□ 0.36
CAPN9-203ENST00000366666 RIMS2Q9UQ26 1411 aa17.29■□□□□ 0.36
CAPN9-203ENST00000366666 SETD1BQ9UPS6 1966 aaKnown RBP17.29■□□□□ 0.36
CAPN9-203ENST00000366666 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
CAPN9-203ENST00000366666 CEP170BQ9Y4F5 1589 aaPredicted RBP17.28■□□□□ 0.36
CAPN9-203ENST00000366666 STAC3Q96MF2 364 aa17.28■□□□□ 0.36
CAPN9-203ENST00000366666 KIAA1210Q9ULL0 1709 aa17.27■□□□□ 0.36
CAPN9-203ENST00000366666 VGFO15240 615 aaPredicted RBP17.27■□□□□ 0.36
CAPN9-203ENST00000366666 GPRASP1Q5JY77 1395 aa17.26■□□□□ 0.35
CAPN9-203ENST00000366666 USP47Q96K76 1375 aa17.26■□□□□ 0.35
CAPN9-203ENST00000366666 TMEM2Q9UHN6 1383 aa17.26■□□□□ 0.35
CAPN9-203ENST00000366666 EIF4G2P78344 907 aaKnown RBP eCLIP17.25■□□□□ 0.35
CAPN9-203ENST00000366666 ZNF142P52746 1687 aaPredicted RBP17.25■□□□□ 0.35
CAPN9-203ENST00000366666 LTKP29376 864 aa17.24■□□□□ 0.35
CAPN9-203ENST00000366666 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
CAPN9-203ENST00000366666 C14orf93Q9H972 538 aaKnown RBP17.23■□□□□ 0.35
CAPN9-203ENST00000366666 LAMC1P11047 1609 aa17.23■□□□□ 0.35
CAPN9-203ENST00000366666 NRXN3Q9Y4C0 1643 aa17.23■□□□□ 0.35
CAPN9-203ENST00000366666 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
CAPN9-203ENST00000366666 ADGRB1O14514 1584 aa17.22■□□□□ 0.35
CAPN9-203ENST00000366666 SLIT1O75093 1534 aa17.21■□□□□ 0.35
CAPN9-203ENST00000366666 ASXL1Q8IXJ9 1541 aa17.21■□□□□ 0.35
CAPN9-203ENST00000366666 ARHGAP23Q9P227 1491 aa17.21■□□□□ 0.35
CAPN9-203ENST00000366666 ALKQ9UM73 1620 aa17.21■□□□□ 0.35
CAPN9-203ENST00000366666 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.34
CAPN9-203ENST00000366666 ST20-MTHFSA0A0A6YYL1 179 aa17.2■□□□□ 0.34
CAPN9-203ENST00000366666 C11orf95C9JLR9 678 aaPredicted RBP17.2■□□□□ 0.34
CAPN9-203ENST00000366666 THEMISQ8N1K5 641 aaPredicted RBP17.19■□□□□ 0.34
CAPN9-203ENST00000366666 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
CAPN9-203ENST00000366666 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
CAPN9-203ENST00000366666 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.17■□□□□ 0.34
CAPN9-203ENST00000366666 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
CAPN9-203ENST00000366666 SCAF11Q99590 1463 aaKnown RBP17.16■□□□□ 0.34
CAPN9-203ENST00000366666 TRAK1Q9UPV9 953 aa17.14■□□□□ 0.33
CAPN9-203ENST00000366666 ADAMTS13Q76LX8 1427 aa17.14■□□□□ 0.33
CAPN9-203ENST00000366666 BCANQ96GW7 911 aa17.13■□□□□ 0.33
CAPN9-203ENST00000366666 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
CAPN9-203ENST00000366666 METP08581 1390 aa17.13■□□□□ 0.33
CAPN9-203ENST00000366666 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
CAPN9-203ENST00000366666 HDGFP51858 240 aaKnown RBP17.13■□□□□ 0.33
CAPN9-203ENST00000366666 ARHGEF28Q8N1W1 1705 aaKnown RBP17.12■□□□□ 0.33
CAPN9-203ENST00000366666 STK26Q9P289 416 aa17.12■□□□□ 0.33
CAPN9-203ENST00000366666 PLEKHG1Q9ULL1 1385 aa17.12■□□□□ 0.33
CAPN9-203ENST00000366666 POLR1AO95602 1720 aaPredicted RBP17.12■□□□□ 0.33
CAPN9-203ENST00000366666 SLC26A8Q96RN1 970 aa17.12■□□□□ 0.33
CAPN9-203ENST00000366666 TESK2Q96S53 571 aa17.12■□□□□ 0.33
CAPN9-203ENST00000366666 HSPA2P54652 639 aa17.09■□□□□ 0.33
CAPN9-203ENST00000366666 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
CAPN9-203ENST00000366666 MED14O60244 1454 aa17.09■□□□□ 0.33
CAPN9-203ENST00000366666 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
CAPN9-203ENST00000366666 QRICH2Q9H0J4 1663 aa17.08■□□□□ 0.32
CAPN9-203ENST00000366666 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.32
CAPN9-203ENST00000366666 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
CAPN9-203ENST00000366666 DISP3Q9P2K9 1392 aa17.07■□□□□ 0.32
CAPN9-203ENST00000366666 LMTK3Q96Q04 1460 aa17.07■□□□□ 0.32
CAPN9-203ENST00000366666 NCKAP5LQ9HCH0 1330 aa17.07■□□□□ 0.32
CAPN9-203ENST00000366666 CCDC7Q96M83 1385 aa17.07■□□□□ 0.32
CAPN9-203ENST00000366666 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
CAPN9-203ENST00000366666 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
CAPN9-203ENST00000366666 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
CAPN9-203ENST00000366666 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
CAPN9-203ENST00000366666 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
CAPN9-203ENST00000366666 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
CAPN9-203ENST00000366666 PLEKHH1Q9ULM0 1364 aa17.02■□□□□ 0.32
CAPN9-203ENST00000366666 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
CAPN9-203ENST00000366666 PRAM1Q96QH2 718 aa17.02■□□□□ 0.32
CAPN9-203ENST00000366666 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
CAPN9-203ENST00000366666 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
CAPN9-203ENST00000366666 NPHP4O75161 1426 aaPredicted RBP17■□□□□ 0.31
CAPN9-203ENST00000366666 DIP2AQ14689 1571 aa17■□□□□ 0.31
CAPN9-203ENST00000366666 ABCC11Q96J66 1382 aa17■□□□□ 0.31
CAPN9-203ENST00000366666 STRCQ7RTU9 1775 aa17■□□□□ 0.31
CAPN9-203ENST00000366666 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
CAPN9-203ENST00000366666 TMF1P82094 1093 aa16.98■□□□□ 0.31
CAPN9-203ENST00000366666 DLC1Q96QB1 1528 aa16.98■□□□□ 0.31
CAPN9-203ENST00000366666 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
CAPN9-203ENST00000366666 CPS1P31327 1500 aa16.98■□□□□ 0.31
CAPN9-203ENST00000366666 POGKQ9P215 609 aa16.97■□□□□ 0.31
CAPN9-203ENST00000366666 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
CAPN9-203ENST00000366666 MINK1Q8N4C8 1332 aaPredicted RBP16.97■□□□□ 0.31
CAPN9-203ENST00000366666 TECPR2O15040 1411 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms