RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FGD6Q6ZV73 1430 aa17.2■□□□□ 0.34
CSNK1E-202ENST00000366216 SPATA31A6Q5VVP1 1343 aa17.2■□□□□ 0.34
CSNK1E-202ENST00000366216 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-202ENST00000366216 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
CSNK1E-202ENST00000366216 MEX3CQ5U5Q3 659 aaKnown RBP17.19■□□□□ 0.34
CSNK1E-202ENST00000366216 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-202ENST00000366216 ADGRB3O60242 1522 aa17.18■□□□□ 0.34
CSNK1E-202ENST00000366216 IDI1Q13907 227 aa17.18■□□□□ 0.34
CSNK1E-202ENST00000366216 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
CSNK1E-202ENST00000366216 PPARGC1BQ86YN6 1023 aaKnown RBP17.17■□□□□ 0.34
CSNK1E-202ENST00000366216 GCC2Q8IWJ2 1684 aa17.16■□□□□ 0.34
CSNK1E-202ENST00000366216 RXRBP28702 533 aa17.15■□□□□ 0.34
CSNK1E-202ENST00000366216 ERBINQ96RT1 1412 aa17.14■□□□□ 0.33
CSNK1E-202ENST00000366216 DIP2AQ14689 1571 aa17.14■□□□□ 0.33
CSNK1E-202ENST00000366216 KIF15Q9NS87 1388 aa17.14■□□□□ 0.33
CSNK1E-202ENST00000366216 ABCC5O15440 1437 aa17.13■□□□□ 0.33
CSNK1E-202ENST00000366216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.12■□□□□ 0.33
CSNK1E-202ENST00000366216 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
CSNK1E-202ENST00000366216 MYOM3Q5VTT5 1437 aa17.11■□□□□ 0.33
CSNK1E-202ENST00000366216 LMTK2Q8IWU2 1503 aa17.11■□□□□ 0.33
CSNK1E-202ENST00000366216 NOS1P29475 1434 aa17.1■□□□□ 0.33
CSNK1E-202ENST00000366216 BCANQ96GW7 911 aa17.09■□□□□ 0.33
CSNK1E-202ENST00000366216 KANK1Q14678 1352 aa17.09■□□□□ 0.33
CSNK1E-202ENST00000366216 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
CSNK1E-202ENST00000366216 NHSL1Q5SYE7 1610 aa17.08■□□□□ 0.32
CSNK1E-202ENST00000366216 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
CSNK1E-202ENST00000366216 TMEM131LA2VDJ0 1609 aa17.06■□□□□ 0.32
CSNK1E-202ENST00000366216 PLEKHG1Q9ULL1 1385 aa17.05■□□□□ 0.32
CSNK1E-202ENST00000366216 RGS12O14924 1447 aa17.04■□□□□ 0.32
CSNK1E-202ENST00000366216 AFF2P51816 1311 aa17.04■□□□□ 0.32
CSNK1E-202ENST00000366216 C14orf37Q86TY3 774 aa17.04■□□□□ 0.32
CSNK1E-202ENST00000366216 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 CADPS2Q86UW7 1296 aa17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 EP400Q96L91 3159 aa17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
CSNK1E-202ENST00000366216 DAPK1P53355 1430 aa17.02■□□□□ 0.31
CSNK1E-202ENST00000366216 ATF3P18847 181 aa17.01■□□□□ 0.31
CSNK1E-202ENST00000366216 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
CSNK1E-202ENST00000366216 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
CSNK1E-202ENST00000366216 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
CSNK1E-202ENST00000366216 RIMS2Q9UQ26 1411 aa17■□□□□ 0.31
CSNK1E-202ENST00000366216 ASXL1Q8IXJ9 1541 aa17■□□□□ 0.31
CSNK1E-202ENST00000366216 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
CSNK1E-202ENST00000366216 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
CSNK1E-202ENST00000366216 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
CSNK1E-202ENST00000366216 BRINP3Q76B58 766 aa16.98■□□□□ 0.31
CSNK1E-202ENST00000366216 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
CSNK1E-202ENST00000366216 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
CSNK1E-202ENST00000366216 RBM6P78332 1123 aaKnown RBP16.97■□□□□ 0.31
CSNK1E-202ENST00000366216 TRPM2O94759 1503 aa16.96■□□□□ 0.31
CSNK1E-202ENST00000366216 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-202ENST00000366216 NUTM2DQ5VT03 806 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-202ENST00000366216 PIAS4Q8N2W9 510 aaPredicted RBP16.96■□□□□ 0.31
CSNK1E-202ENST00000366216 QTRT2Q9H974 415 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-202ENST00000366216 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
CSNK1E-202ENST00000366216 SETBP1Q9Y6X0 1596 aa16.95■□□□□ 0.3
CSNK1E-202ENST00000366216 ATAD2Q6PL18 1390 aa16.95■□□□□ 0.3
CSNK1E-202ENST00000366216 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-202ENST00000366216 DCCP43146 1447 aa16.95■□□□□ 0.3
CSNK1E-202ENST00000366216 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
CSNK1E-202ENST00000366216 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
CSNK1E-202ENST00000366216 UNC13BO14795 1591 aa16.93■□□□□ 0.3
CSNK1E-202ENST00000366216 MARF1Q9Y4F3 1742 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-202ENST00000366216 E9PCH4 1651 aa16.92■□□□□ 0.3
CSNK1E-202ENST00000366216 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
CSNK1E-202ENST00000366216 ANKRD30AQ9BXX3 1397 aa16.91■□□□□ 0.3
CSNK1E-202ENST00000366216 NALCNQ8IZF0 1738 aa16.91■□□□□ 0.3
CSNK1E-202ENST00000366216 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
CSNK1E-202ENST00000366216 MST1RQ04912 1400 aa16.9■□□□□ 0.3
CSNK1E-202ENST00000366216 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
CSNK1E-202ENST00000366216 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-202ENST00000366216 PNPLA6Q8IY17 1366 aa16.89■□□□□ 0.3
CSNK1E-202ENST00000366216 LAMC1P11047 1609 aa16.89■□□□□ 0.29
CSNK1E-202ENST00000366216 NRXN3Q9Y4C0 1643 aa16.89■□□□□ 0.29
CSNK1E-202ENST00000366216 DDX17Q92841 729 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-202ENST00000366216 NGLY1Q96IV0 654 aa16.89■□□□□ 0.29
CSNK1E-202ENST00000366216 ADGRL2O95490 1459 aa16.88■□□□□ 0.29
CSNK1E-202ENST00000366216 AMOTL2Q9Y2J4 779 aa16.86■□□□□ 0.29
CSNK1E-202ENST00000366216 IQGAP3Q86VI3 1631 aa16.85■□□□□ 0.29
CSNK1E-202ENST00000366216 BRWD3Q6RI45 1802 aa16.84■□□□□ 0.29
CSNK1E-202ENST00000366216 LRP5O75197 1615 aa16.84■□□□□ 0.29
CSNK1E-202ENST00000366216 ADAMTS2O95450 1211 aa16.83■□□□□ 0.28
CSNK1E-202ENST00000366216 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
CSNK1E-202ENST00000366216 KCNA4P22459 653 aa16.83■□□□□ 0.28
CSNK1E-202ENST00000366216 COL22A1Q8NFW1 1626 aaPredicted RBP16.83■□□□□ 0.28
CSNK1E-202ENST00000366216 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
CSNK1E-202ENST00000366216 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-202ENST00000366216 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
CSNK1E-202ENST00000366216 USP21Q9UK80 565 aa16.8■□□□□ 0.28
CSNK1E-202ENST00000366216 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-202ENST00000366216 ATRNO75882 1429 aa16.79■□□□□ 0.28
CSNK1E-202ENST00000366216 ADGRL3Q9HAR2 1447 aa16.79■□□□□ 0.28
CSNK1E-202ENST00000366216 METP08581 1390 aa16.78■□□□□ 0.28
CSNK1E-202ENST00000366216 HRCP23327 699 aa16.78■□□□□ 0.28
CSNK1E-202ENST00000366216 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
CSNK1E-202ENST00000366216 SPHKAPQ2M3C7 1700 aa16.77■□□□□ 0.28
CSNK1E-202ENST00000366216 FNBP4Q8N3X1 1017 aaPredicted RBP16.75■□□□□ 0.27
CSNK1E-202ENST00000366216 C1orf167Q5SNV9 1468 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms