RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 SEPT9Q9UHD8 586 aaPredicted RBP5.91□□□□□ -1.46
RNU6-428P-201ENST00000362942 LRCH3Q96II8 777 aa5.9□□□□□ -1.46
RNU6-428P-201ENST00000362942 ZFRQ96KR1 1074 aaKnown RBP5.9□□□□□ -1.46
RNU6-428P-201ENST00000362942 TMEM134Q9H6X4 195 aa5.9□□□□□ -1.46
RNU6-428P-201ENST00000362942 MDM2Q00987 491 aaPredicted RBP5.89□□□□□ -1.47
RNU6-428P-201ENST00000362942 WNT2BQ93097 391 aa5.88□□□□□ -1.47
RNU6-428P-201ENST00000362942 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.88□□□□□ -1.47
RNU6-428P-201ENST00000362942 RNF40O75150 1001 aa5.87□□□□□ -1.47
RNU6-428P-201ENST00000362942 SWT1Q5T5J6 900 aaKnown RBP5.87□□□□□ -1.47
RNU6-428P-201ENST00000362942 GIGYF2Q6Y7W6 1299 aaKnown RBP5.87□□□□□ -1.47
RNU6-428P-201ENST00000362942 PARP9Q8IXQ6 854 aa5.87□□□□□ -1.47
RNU6-428P-201ENST00000362942 PRR14Q9BWN1 585 aa5.87□□□□□ -1.47
RNU6-428P-201ENST00000362942 C3orf80F5H4A9 247 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 DIXDC1Q155Q3 683 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 SAMD7Q7Z3H4 446 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 RDH13Q8NBN7 331 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 DDRGK1Q96HY6 314 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 PHOX2BQ99453 314 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 KDM4CQ9H3R0 1056 aa5.86□□□□□ -1.47
RNU6-428P-201ENST00000362942 SOWAHBA6NEL2 793 aa5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 DDX11L8A8MPP1 907 aa5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 SSTR3P32745 418 aaPredicted RBP5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 BRPF1P55201 1214 aaPredicted RBP5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 KMT5BQ4FZB7 885 aa5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 TMUB1Q9BVT8 246 aa5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 FAM217BQ9NTX9 383 aaPredicted RBP5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 MYT1LQ9UL68 1186 aa5.85□□□□□ -1.47
RNU6-428P-201ENST00000362942 PPP4CP60510 307 aa5.84□□□□□ -1.47
RNU6-428P-201ENST00000362942 NYAP1Q6ZVC0 841 aa5.84□□□□□ -1.47
RNU6-428P-201ENST00000362942 TSR3Q9UJK0 312 aaKnown RBP5.84□□□□□ -1.47
RNU6-428P-201ENST00000362942 GRIPAP1Q4V328 841 aa5.83□□□□□ -1.48
RNU6-428P-201ENST00000362942 NLRP7Q8WX94 980 aa5.83□□□□□ -1.48
RNU6-428P-201ENST00000362942 KCTD12Q96CX2 325 aaKnown RBP5.83□□□□□ -1.48
RNU6-428P-201ENST00000362942 CD46P15529 392 aa5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 THSD4Q6ZMP0 1018 aa5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 NUTM1Q86Y26 1132 aa5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 RSPH6AQ9H0K4 717 aa5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 GPBP1L1Q9HC44 474 aaPredicted RBP5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 HPS5Q9UPZ3 1129 aa5.82□□□□□ -1.48
RNU6-428P-201ENST00000362942 USP46P62068 366 aa5.81□□□□□ -1.48
RNU6-428P-201ENST00000362942 RNF166Q96A37 237 aaPredicted RBP5.81□□□□□ -1.48
RNU6-428P-201ENST00000362942 BEGAINQ9BUH8 593 aa5.81□□□□□ -1.48
RNU6-428P-201ENST00000362942 REPIN1Q9BWE0 567 aaKnown RBP5.81□□□□□ -1.48
RNU6-428P-201ENST00000362942 MS4A1P11836 297 aa5.8□□□□□ -1.48
RNU6-428P-201ENST00000362942 BCAMP50895 628 aa5.8□□□□□ -1.48
RNU6-428P-201ENST00000362942 CFHP08603 1231 aa5.79□□□□□ -1.48
RNU6-428P-201ENST00000362942 GCGRP47871 477 aa5.79□□□□□ -1.48
RNU6-428P-201ENST00000362942 TMEM132AQ24JP5 1023 aa5.79□□□□□ -1.48
RNU6-428P-201ENST00000362942 HCSTQ9UBK5 93 aa5.79□□□□□ -1.48
RNU6-428P-201ENST00000362942 KDM4AO75164 1064 aa5.78□□□□□ -1.48
RNU6-428P-201ENST00000362942 SLC10A3P09131 477 aa5.78□□□□□ -1.48
RNU6-428P-201ENST00000362942 PTPN5P54829 565 aa5.78□□□□□ -1.48
RNU6-428P-201ENST00000362942 ACTN4O43707 911 aaKnown RBP5.77□□□□□ -1.49
RNU6-428P-201ENST00000362942 IL27Q8NEV9 243 aa5.77□□□□□ -1.49
RNU6-428P-201ENST00000362942 FAM117AQ9C073 453 aa5.77□□□□□ -1.49
RNU6-428P-201ENST00000362942 GOPCQ9HD26 462 aa5.77□□□□□ -1.49
RNU6-428P-201ENST00000362942 ATP6V1AP38606 617 aa5.76□□□□□ -1.49
RNU6-428P-201ENST00000362942 WBP1LQ9NX94 342 aa5.76□□□□□ -1.49
RNU6-428P-201ENST00000362942 ATP1B4Q9UN42 357 aaPredicted RBP5.76□□□□□ -1.49
RNU6-428P-201ENST00000362942 GJA5P36382 358 aa5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 SH3D19Q5HYK7 790 aa5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 SPIRE2Q8WWL2 714 aa5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 PCMTD1Q96MG8 357 aaPredicted RBP5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 TBC1D2Q9BYX2 928 aa5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 PCDHB3Q9Y5E6 796 aa5.75□□□□□ -1.49
RNU6-428P-201ENST00000362942 NR1I2O75469 434 aa5.74□□□□□ -1.49
RNU6-428P-201ENST00000362942 SKIV2LQ15477 1246 aaKnown RBP5.74□□□□□ -1.49
RNU6-428P-201ENST00000362942 PLEKHG3A1L390 1219 aa5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 HOXA2O43364 376 aa5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 CLK2P49760 499 aaKnown RBP5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 APLP1P51693 650 aa5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 FUT2Q10981 343 aa5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 Q3C1V9 767 aa5.73□□□□□ -1.49
RNU6-428P-201ENST00000362942 TUSC1Q2TAM9 212 aa5.72□□□□□ -1.49
RNU6-428P-201ENST00000362942 MYSM1Q5VVJ2 828 aa5.72□□□□□ -1.49
RNU6-428P-201ENST00000362942 RIC3Q7Z5B4 369 aa5.72□□□□□ -1.49
RNU6-428P-201ENST00000362942 SPTLC1O15269 473 aa5.71□□□□□ -1.5
RNU6-428P-201ENST00000362942 FDX1P10109 184 aa5.71□□□□□ -1.5
RNU6-428P-201ENST00000362942 RSBN1LQ6PCB5 846 aaPredicted RBP5.71□□□□□ -1.5
RNU6-428P-201ENST00000362942 IL21Q9HBE4 155 aa5.71□□□□□ -1.5
RNU6-428P-201ENST00000362942 MOXD2PA6NHM9 499 aa5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 SPDYE5A6NIY4 337 aa5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 FMNL1O95466 1100 aaPredicted RBP5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 MORN1Q5T089 497 aa5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 PRPF38BQ5VTL8 546 aaKnown RBP5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 ZBTB3Q9H5J0 574 aa5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 SALL2Q9Y467 1007 aaPredicted RBP5.7□□□□□ -1.5
RNU6-428P-201ENST00000362942 PUS10Q3MIT2 529 aaKnown RBP5.69□□□□□ -1.5
RNU6-428P-201ENST00000362942 POLR3EQ9NVU0 708 aa5.69□□□□□ -1.5
RNU6-428P-201ENST00000362942 NUTM2BA6NNL0 878 aaPredicted RBP5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 NUTM2EB1AL46 878 aaPredicted RBP5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 NDUFV2P19404 249 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 COPS2P61201 443 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 MTMR2Q13614 643 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 NUTM2DQ5VT03 806 aaPredicted RBP5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 BLOC1S3Q6QNY0 202 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 NUTM2AQ8IVF1 878 aaPredicted RBP5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 SCUBE3Q8IX30 993 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 MTRQ99707 1265 aa5.68□□□□□ -1.5
RNU6-428P-201ENST00000362942 C6orf229H3BNL8 230 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms