RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
VAMP1-201ENST00000361716 TROQ12816 1431 aaPredicted RBP16.15■□□□□ 0.18
VAMP1-201ENST00000361716 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
VAMP1-201ENST00000361716 MCM4P33991 863 aa16.15■□□□□ 0.18
VAMP1-201ENST00000361716 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
VAMP1-201ENST00000361716 TBC1D2Q9BYX2 928 aa16.13■□□□□ 0.17
VAMP1-201ENST00000361716 DNMT1P26358 1616 aaKnown RBP16.13■□□□□ 0.17
VAMP1-201ENST00000361716 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
VAMP1-201ENST00000361716 KIAA1211Q6ZU35 1233 aa16.13■□□□□ 0.17
VAMP1-201ENST00000361716 GRPEL1Q9HAV7 217 aa16.12■□□□□ 0.17
VAMP1-201ENST00000361716 CDC42BPAQ5VT25 1732 aa16.12■□□□□ 0.17
VAMP1-201ENST00000361716 ITSN2Q9NZM3 1697 aa16.12■□□□□ 0.17
VAMP1-201ENST00000361716 AFAP1Q8N556 730 aa16.11■□□□□ 0.17
VAMP1-201ENST00000361716 NCLP19338 710 aaKnown RBP16.11■□□□□ 0.17
VAMP1-201ENST00000361716 MRE11P49959 708 aa16.11■□□□□ 0.17
VAMP1-201ENST00000361716 ANP32BQ92688 251 aaKnown RBP16.11■□□□□ 0.17
VAMP1-201ENST00000361716 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
VAMP1-201ENST00000361716 ABCC10Q5T3U5 1492 aa16.1■□□□□ 0.17
VAMP1-201ENST00000361716 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
VAMP1-201ENST00000361716 CCDC144AA2RUR9 1427 aa16.09■□□□□ 0.17
VAMP1-201ENST00000361716 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
VAMP1-201ENST00000361716 GPATCH8Q9UKJ3 1502 aaKnown RBP16.08■□□□□ 0.16
VAMP1-201ENST00000361716 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
VAMP1-201ENST00000361716 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
VAMP1-201ENST00000361716 MSNP26038 577 aaKnown RBP16.07■□□□□ 0.16
VAMP1-201ENST00000361716 R3HCC1Q9Y3T6 440 aaKnown RBP16.06■□□□□ 0.16
VAMP1-201ENST00000361716 DISP3Q9P2K9 1392 aa16.06■□□□□ 0.16
VAMP1-201ENST00000361716 SAFB2Q14151 953 aaKnown RBP eCLIP16.06■□□□□ 0.16
VAMP1-201ENST00000361716 SPINK5Q9NQ38 1064 aaPredicted RBP16.05■□□□□ 0.16
VAMP1-201ENST00000361716 USP19O94966 1318 aa16.05■□□□□ 0.16
VAMP1-201ENST00000361716 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
VAMP1-201ENST00000361716 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
VAMP1-201ENST00000361716 CHMP5Q9NZZ3 219 aa16.04■□□□□ 0.16
VAMP1-201ENST00000361716 PZPP20742 1482 aa16.04■□□□□ 0.16
VAMP1-201ENST00000361716 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-201ENST00000361716 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-201ENST00000361716 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-201ENST00000361716 CAMSAP2Q08AD1 1489 aa16.03■□□□□ 0.16
VAMP1-201ENST00000361716 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
VAMP1-201ENST00000361716 ADGBQ8N7X0 1667 aa16.02■□□□□ 0.16
VAMP1-201ENST00000361716 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
VAMP1-201ENST00000361716 NUTM2DQ5VT03 806 aaPredicted RBP16.02■□□□□ 0.15
VAMP1-201ENST00000361716 CDC42BPBQ9Y5S2 1711 aa16.01■□□□□ 0.15
VAMP1-201ENST00000361716 MAPK8IP3Q9UPT6 1336 aa16.01■□□□□ 0.15
VAMP1-201ENST00000361716 FTSJ3Q8IY81 847 aaKnown RBP16■□□□□ 0.15
VAMP1-201ENST00000361716 ANTXR1Q9H6X2 564 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 CENPJQ9HC77 1338 aaPredicted RBP16■□□□□ 0.15
VAMP1-201ENST00000361716 BCORL1Q5H9F3 1711 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 TPM2P07951 284 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 ARHGAP5Q13017 1502 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 TNNQ9UQP3 1299 aa16■□□□□ 0.15
VAMP1-201ENST00000361716 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 FSD2A1L4K1 749 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 DMRT2Q9Y5R5 561 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
VAMP1-201ENST00000361716 U2SURPO15042 1029 aaKnown RBP15.98■□□□□ 0.15
VAMP1-201ENST00000361716 PREX2Q70Z35 1606 aa15.98■□□□□ 0.15
VAMP1-201ENST00000361716 EFCAB2Q5VUJ9 269 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 GAS2L3Q86XJ1 694 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 ADGRL2O95490 1459 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 MORC1Q86VD1 984 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 DDX11L8A8MPP1 907 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
VAMP1-201ENST00000361716 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
VAMP1-201ENST00000361716 TPRNQ4KMQ1 711 aa15.96■□□□□ 0.15
VAMP1-201ENST00000361716 RAPGEF3O95398 923 aa15.96■□□□□ 0.14
VAMP1-201ENST00000361716 TESK2Q96S53 571 aa15.96■□□□□ 0.14
VAMP1-201ENST00000361716 NASPP49321 788 aaPredicted RBP15.95■□□□□ 0.14
VAMP1-201ENST00000361716 SLFN5Q08AF3 891 aa15.95■□□□□ 0.14
VAMP1-201ENST00000361716 PARD3Q8TEW0 1356 aa15.94■□□□□ 0.14
VAMP1-201ENST00000361716 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
VAMP1-201ENST00000361716 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
VAMP1-201ENST00000361716 XPCQ01831 940 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-201ENST00000361716 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
VAMP1-201ENST00000361716 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
VAMP1-201ENST00000361716 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
VAMP1-201ENST00000361716 U2AF1L5P0DN76 240 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-201ENST00000361716 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
VAMP1-201ENST00000361716 CGNL1Q0VF96 1302 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 TTC37Q6PGP7 1564 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 SLC24A1O60721 1099 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 MPNDQ8N594 471 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 ARHGEF5Q12774 1597 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 CFAP70Q5T0N1 1121 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 GBP4Q96PP9 640 aa15.93■□□□□ 0.14
VAMP1-201ENST00000361716 DDX49Q9Y6V7 483 aaKnown RBP15.93■□□□□ 0.14
VAMP1-201ENST00000361716 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
VAMP1-201ENST00000361716 SAMD9LQ8IVG5 1584 aa15.92■□□□□ 0.14
VAMP1-201ENST00000361716 E9PSI1 815 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 PCDHB15Q9Y5E8 787 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.91■□□□□ 0.14
VAMP1-201ENST00000361716 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 ASXL2Q76L83 1435 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
VAMP1-201ENST00000361716 TNPO1Q92973 898 aaKnown RBP15.91■□□□□ 0.14
VAMP1-201ENST00000361716 UQCRHLA0A096LP55 91 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms