RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 CGNL1Q0VF96 1302 aa25.13■■□□□ 1.61
CDC42BPB-201ENST00000361246 TMEM132EQ6IEE7 984 aa25.13■■□□□ 1.61
CDC42BPB-201ENST00000361246 AMOTL1Q8IY63 956 aa25.13■■□□□ 1.61
CDC42BPB-201ENST00000361246 ESCO1Q5FWF5 840 aa25.13■■□□□ 1.61
CDC42BPB-201ENST00000361246 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
CDC42BPB-201ENST00000361246 CABP2Q9NPB3 220 aa25.12■■□□□ 1.61
CDC42BPB-201ENST00000361246 CCDC27Q2M243 656 aa25.12■■□□□ 1.61
CDC42BPB-201ENST00000361246 TPD52L1Q16890 204 aaPredicted RBP25.12■■□□□ 1.61
CDC42BPB-201ENST00000361246 CCER2I3L3R5 266 aa25.1■■□□□ 1.61
CDC42BPB-201ENST00000361246 FAM184AQ8NB25 1140 aa25.1■■□□□ 1.61
CDC42BPB-201ENST00000361246 RBM42Q9BTD8 480 aaKnown RBP25.08■■□□□ 1.61
CDC42BPB-201ENST00000361246 RAPGEF4Q8WZA2 1011 aa25.08■■□□□ 1.61
CDC42BPB-201ENST00000361246 RSPH4AQ5TD94 716 aa25.07■■□□□ 1.6
CDC42BPB-201ENST00000361246 CEP89Q96ST8 783 aa25.07■■□□□ 1.6
CDC42BPB-201ENST00000361246 RIPK4P57078 832 aa25.06■■□□□ 1.6
CDC42BPB-201ENST00000361246 SYNE3Q6ZMZ3 975 aa25.05■■□□□ 1.6
CDC42BPB-201ENST00000361246 ZNF644Q9H582 1327 aaPredicted RBP25.04■■□□□ 1.6
CDC42BPB-201ENST00000361246 RIC3Q7Z5B4 369 aa25.04■■□□□ 1.6
CDC42BPB-201ENST00000361246 FKBP5Q13451 457 aaPredicted RBP25.04■■□□□ 1.6
CDC42BPB-201ENST00000361246 DIAPH1O60610 1272 aaKnown RBP25.04■■□□□ 1.6
CDC42BPB-201ENST00000361246 TSPYL4Q9UJ04 414 aa25.04■■□□□ 1.6
CDC42BPB-201ENST00000361246 NEUROD6Q96NK8 337 aa25.03■■□□□ 1.6
CDC42BPB-201ENST00000361246 NLRP13Q86W25 1043 aa25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 GGNBP2Q9H3C7 697 aa25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 DIAPH3Q9NSV4 1193 aa25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 IFIT2P09913 472 aaKnown RBP25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 SF3B2Q13435 895 aaKnown RBP25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 COG6Q9Y2V7 657 aa25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 RAD54L2Q9Y4B4 1467 aa25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
CDC42BPB-201ENST00000361246 NFXL1Q6ZNB6 911 aa25.01■■□□□ 1.59
CDC42BPB-201ENST00000361246 ABTB2Q8N961 1025 aa25.01■■□□□ 1.59
CDC42BPB-201ENST00000361246 ANO2Q9NQ90 1003 aa25.01■■□□□ 1.59
CDC42BPB-201ENST00000361246 UACAQ9BZF9 1416 aa25.01■■□□□ 1.59
CDC42BPB-201ENST00000361246 APAF1O14727 1248 aa25.01■■□□□ 1.59
CDC42BPB-201ENST00000361246 PROSER2Q86WR7 435 aaPredicted RBP25■■□□□ 1.59
CDC42BPB-201ENST00000361246 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
CDC42BPB-201ENST00000361246 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
CDC42BPB-201ENST00000361246 CCDC34Q96HJ3 373 aa24.99■■□□□ 1.59
CDC42BPB-201ENST00000361246 NLRP6P59044 892 aa24.99■■□□□ 1.59
CDC42BPB-201ENST00000361246 RBM19Q9Y4C8 960 aaKnown RBP24.99■■□□□ 1.59
CDC42BPB-201ENST00000361246 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
CDC42BPB-201ENST00000361246 SYAP1Q96A49 352 aaPredicted RBP24.98■■□□□ 1.59
CDC42BPB-201ENST00000361246 TIMELESSQ9UNS1 1208 aa24.97■■□□□ 1.59
CDC42BPB-201ENST00000361246 XPCQ01831 940 aaPredicted RBP24.97■■□□□ 1.59
CDC42BPB-201ENST00000361246 ST18O60284 1047 aa24.97■■□□□ 1.59
CDC42BPB-201ENST00000361246 DDX54Q8TDD1 881 aaKnown RBP24.97■■□□□ 1.59
CDC42BPB-201ENST00000361246 IKQ13123 557 aaPredicted RBP24.96■■□□□ 1.59
CDC42BPB-201ENST00000361246 PCMTD1Q96MG8 357 aaPredicted RBP24.96■■□□□ 1.59
CDC42BPB-201ENST00000361246 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.593e-6■■■■□ 24.7
CDC42BPB-201ENST00000361246 DEKP35659 375 aaKnown RBP24.95■■□□□ 1.58
CDC42BPB-201ENST00000361246 DDX58O95786 925 aaKnown RBP24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 MYBBP1AQ9BQG0 1328 aaKnown RBP24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 TXNDC2Q86VQ3 553 aa24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 CRBNQ96SW2 442 aa24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 G3BP1Q13283 466 aaKnown RBP eCLIP24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.94■■□□□ 1.58
CDC42BPB-201ENST00000361246 WASHC4Q2M389 1173 aa24.91■■□□□ 1.58
CDC42BPB-201ENST00000361246 CCDC43Q96MW1 224 aaKnown RBP24.91■■□□□ 1.58
CDC42BPB-201ENST00000361246 TRIM29Q14134 588 aa24.91■■□□□ 1.58
CDC42BPB-201ENST00000361246 ZKSCAN2Q63HK3 967 aa24.91■■□□□ 1.58
CDC42BPB-201ENST00000361246 CSPP1Q1MSJ5 1256 aa24.9■■□□□ 1.58
CDC42BPB-201ENST00000361246 CCAR2Q8N163 923 aaKnown RBP24.89■■□□□ 1.58
CDC42BPB-201ENST00000361246 USP47Q96K76 1375 aa24.89■■□□□ 1.57
CDC42BPB-201ENST00000361246 ARHGAP5Q13017 1502 aa24.88■■□□□ 1.57
CDC42BPB-201ENST00000361246 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
CDC42BPB-201ENST00000361246 AFAP1Q8N556 730 aa24.87■■□□□ 1.57
CDC42BPB-201ENST00000361246 ERICH2A1L162 156 aa24.87■■□□□ 1.57
CDC42BPB-201ENST00000361246 CCAR1Q8IX12 1150 aaKnown RBP24.86■■□□□ 1.57
CDC42BPB-201ENST00000361246 TPM3P06753 285 aa24.86■■□□□ 1.57
CDC42BPB-201ENST00000361246 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
CDC42BPB-201ENST00000361246 CPLX1O14810 134 aa24.85■■□□□ 1.57
CDC42BPB-201ENST00000361246 EXOC6Q8TAG9 804 aa24.85■■□□□ 1.57
CDC42BPB-201ENST00000361246 TRDNQ13061 729 aa24.85■■□□□ 1.57
CDC42BPB-201ENST00000361246 CHMP4CQ96CF2 233 aa24.84■■□□□ 1.57
CDC42BPB-201ENST00000361246 BCL11BQ9C0K0 894 aaPredicted RBP24.84■■□□□ 1.57
CDC42BPB-201ENST00000361246 ATP2B2Q01814 1243 aa24.84■■□□□ 1.57
CDC42BPB-201ENST00000361246 TOM1L2Q6ZVM7 507 aa24.84■■□□□ 1.57
CDC42BPB-201ENST00000361246 FAM161AQ3B820 660 aa24.83■■□□□ 1.57
CDC42BPB-201ENST00000361246 KIF3AQ9Y496 699 aa24.83■■□□□ 1.57
CDC42BPB-201ENST00000361246 KIF6Q6ZMV9 814 aa24.82■■□□□ 1.56
CDC42BPB-201ENST00000361246 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
CDC42BPB-201ENST00000361246 DHX57Q6P158 1386 aaKnown RBP24.81■■□□□ 1.56
CDC42BPB-201ENST00000361246 IBSPP21815 317 aaPredicted RBP24.81■■□□□ 1.56
CDC42BPB-201ENST00000361246 TSR1Q2NL82 804 aaKnown RBP24.81■■□□□ 1.56
CDC42BPB-201ENST00000361246 BICDL1Q6ZP65 573 aa24.8■■□□□ 1.56
CDC42BPB-201ENST00000361246 E9PSI1 815 aa24.8■■□□□ 1.56
CDC42BPB-201ENST00000361246 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
CDC42BPB-201ENST00000361246 TPM2P07951 284 aa24.79■■□□□ 1.56
CDC42BPB-201ENST00000361246 LRRFIP1Q32MZ4 808 aaKnown RBP24.79■■□□□ 1.56
CDC42BPB-201ENST00000361246 DNAJC2Q99543 621 aaKnown RBP24.79■■□□□ 1.56
CDC42BPB-201ENST00000361246 GPRASP1Q5JY77 1395 aa24.79■■□□□ 1.56
CDC42BPB-201ENST00000361246 RBM5P52756 815 aaKnown RBP eCLIP24.79■■□□□ 1.56
CDC42BPB-201ENST00000361246 GOLGA6L3A6NEY3 463 aa24.78■■□□□ 1.56
CDC42BPB-201ENST00000361246 TMEM132AQ24JP5 1023 aa24.78■■□□□ 1.56
CDC42BPB-201ENST00000361246 MYL6BP14649 208 aa24.77■■□□□ 1.56
CDC42BPB-201ENST00000361246 PTMSP20962 102 aa24.77■■□□□ 1.56
CDC42BPB-201ENST00000361246 RRP12Q5JTH9 1297 aaKnown RBP24.77■■□□□ 1.56
CDC42BPB-201ENST00000361246 SLC26A8Q96RN1 970 aa24.76■■□□□ 1.55
CDC42BPB-201ENST00000361246 PRAM1Q96QH2 718 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms