RNA–Protein interactions for RNA: ENST00000360620.7

EPHB4-202, Transcript of EPH receptor B4, humanhuman

TSL 1 (best) BASIC

Gene EPHB4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-202ENST00000360620 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
EPHB4-202ENST00000360620 CHMP5Q9NZZ3 219 aa15.09■□□□□ 0.01
EPHB4-202ENST00000360620 LRPPRCP42704 1394 aaKnown RBP15.09■□□□□ 0.01
EPHB4-202ENST00000360620 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
EPHB4-202ENST00000360620 DDX11L8A8MPP1 907 aa15.08■□□□□ 0.01
EPHB4-202ENST00000360620 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0.01
EPHB4-202ENST00000360620 ADAMTS12P58397 1594 aa15.08■□□□□ 0
EPHB4-202ENST00000360620 MSNP26038 577 aaKnown RBP15.08■□□□□ 0
EPHB4-202ENST00000360620 CHMP4BQ9H444 224 aaKnown RBP15.07■□□□□ 0
EPHB4-202ENST00000360620 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
EPHB4-202ENST00000360620 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
EPHB4-202ENST00000360620 HSP90AA2PQ14568 343 aaPredicted RBP15.07■□□□□ 0
EPHB4-202ENST00000360620 PARD3Q8TEW0 1356 aa15.06■□□□□ 0
EPHB4-202ENST00000360620 PTMAP06454 111 aaKnown RBP15.06■□□□□ 0
EPHB4-202ENST00000360620 NUP153P49790 1475 aaKnown RBP15.06■□□□□ 0
EPHB4-202ENST00000360620 C22orf23Q9BZE7 217 aa15.06■□□□□ 0
EPHB4-202ENST00000360620 PDZRN3Q9UPQ7 1066 aa15.06■□□□□ 0
EPHB4-202ENST00000360620 SYNJ2O15056 1496 aa15.06■□□□□ 0
EPHB4-202ENST00000360620 CYB5RLQ6IPT4 315 aa15.05■□□□□ -0
EPHB4-202ENST00000360620 MLECQ14165 292 aa15.05■□□□□ -0
EPHB4-202ENST00000360620 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ -0
EPHB4-202ENST00000360620 RUNDC1Q96C34 613 aa15.05■□□□□ -0
EPHB4-202ENST00000360620 CASC1Q6TDU7 716 aa15.04■□□□□ -0
EPHB4-202ENST00000360620 PLEKHH2Q8IVE3 1493 aa15.04■□□□□ -0
EPHB4-202ENST00000360620 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
EPHB4-202ENST00000360620 KDM6BO15054 1643 aa15.04■□□□□ -0
EPHB4-202ENST00000360620 DISP3Q9P2K9 1392 aa15.04■□□□□ -0
EPHB4-202ENST00000360620 C8orf34Q49A92 452 aa15.03■□□□□ -0
EPHB4-202ENST00000360620 PZPP20742 1482 aa15.03■□□□□ -0
EPHB4-202ENST00000360620 PODXL2Q9NZ53 605 aa15.03■□□□□ -0
EPHB4-202ENST00000360620 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
EPHB4-202ENST00000360620 TRAK2O60296 914 aa15.02□□□□□ -0.01
EPHB4-202ENST00000360620 DNTTIP2Q5QJE6 756 aaKnown RBP15.02□□□□□ -0.01
EPHB4-202ENST00000360620 DISP1Q96F81 1524 aa15.02□□□□□ -0.01
EPHB4-202ENST00000360620 STK26Q9P289 416 aa15.02□□□□□ -0.01
EPHB4-202ENST00000360620 PTMSP20962 102 aa15.01□□□□□ -0.01
EPHB4-202ENST00000360620 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
EPHB4-202ENST00000360620 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
EPHB4-202ENST00000360620 PER1O15534 1290 aaPredicted RBP15.01□□□□□ -0.01
EPHB4-202ENST00000360620 AAMPQ13685 434 aa15.01□□□□□ -0.01
EPHB4-202ENST00000360620 VSIG10Q8N0Z9 540 aa15.01□□□□□ -0.01
EPHB4-202ENST00000360620 CFAP70Q5T0N1 1121 aa15.01□□□□□ -0.01
EPHB4-202ENST00000360620 GPATCH8Q9UKJ3 1502 aaKnown RBP15□□□□□ -0.01
EPHB4-202ENST00000360620 DDX19BQ9UMR2 479 aa15□□□□□ -0.01
EPHB4-202ENST00000360620 APBB1O00213 710 aa15□□□□□ -0.01
EPHB4-202ENST00000360620 MRE11P49959 708 aa14.99□□□□□ -0.01
EPHB4-202ENST00000360620 IGHDP01880 384 aa14.99□□□□□ -0.01
EPHB4-202ENST00000360620 GCC2Q8IWJ2 1684 aa14.99□□□□□ -0.01
EPHB4-202ENST00000360620 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 LNPKQ9C0E8 428 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 MTHFSP49914 203 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 ANKRD45Q5TZF3 282 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
EPHB4-202ENST00000360620 WDR62O43379 1518 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 MCM4P33991 863 aa14.98□□□□□ -0.01
EPHB4-202ENST00000360620 WWC1Q8IX03 1113 aa14.97□□□□□ -0.01
EPHB4-202ENST00000360620 CALD1Q05682 793 aaKnown RBP14.97□□□□□ -0.01
EPHB4-202ENST00000360620 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
EPHB4-202ENST00000360620 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
EPHB4-202ENST00000360620 PLEKHG5O94827 1062 aa14.96□□□□□ -0.01
EPHB4-202ENST00000360620 TESK2Q96S53 571 aa14.96□□□□□ -0.01
EPHB4-202ENST00000360620 PLEKHH1Q9ULM0 1364 aa14.96□□□□□ -0.01
EPHB4-202ENST00000360620 MAGI1Q96QZ7 1491 aaPredicted RBP14.96□□□□□ -0.02
EPHB4-202ENST00000360620 SKOR2Q2VWA4 1001 aaPredicted RBP14.95□□□□□ -0.02
EPHB4-202ENST00000360620 PKNOX2Q96KN3 472 aa14.95□□□□□ -0.02
EPHB4-202ENST00000360620 ATP10BO94823 1461 aa14.95□□□□□ -0.02
EPHB4-202ENST00000360620 NINLQ9Y2I6 1382 aa14.95□□□□□ -0.02
EPHB4-202ENST00000360620 ELL2O00472 640 aaPredicted RBP14.94□□□□□ -0.02
EPHB4-202ENST00000360620 TBC1D2Q9BYX2 928 aa14.94□□□□□ -0.02
EPHB4-202ENST00000360620 ARID3AQ99856 593 aa14.94□□□□□ -0.02
EPHB4-202ENST00000360620 DNMT1P26358 1616 aaKnown RBP14.94□□□□□ -0.02
EPHB4-202ENST00000360620 ARHGAP5Q13017 1502 aa14.94□□□□□ -0.02
EPHB4-202ENST00000360620 UHRF1BP1Q6BDS2 1440 aa14.93□□□□□ -0.02
EPHB4-202ENST00000360620 PLCB2Q00722 1185 aa14.93□□□□□ -0.02
EPHB4-202ENST00000360620 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
EPHB4-202ENST00000360620 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
EPHB4-202ENST00000360620 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
EPHB4-202ENST00000360620 AMER1Q5JTC6 1135 aaPredicted RBP14.92□□□□□ -0.02
EPHB4-202ENST00000360620 OSCARQ8IYS5 282 aa14.92□□□□□ -0.02
EPHB4-202ENST00000360620 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
EPHB4-202ENST00000360620 CFAP44Q96MT7 982 aa14.92□□□□□ -0.02
EPHB4-202ENST00000360620 CCDC141Q6ZP82 1450 aa14.92□□□□□ -0.02
EPHB4-202ENST00000360620 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
EPHB4-202ENST00000360620 ZBTB7CA1YPR0 619 aa14.92□□□□□ -0.02
EPHB4-202ENST00000360620 RARSP54136 660 aaKnown RBP14.92□□□□□ -0.02
EPHB4-202ENST00000360620 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
EPHB4-202ENST00000360620 EXOSC9Q06265 439 aaKnown RBP14.91□□□□□ -0.02
EPHB4-202ENST00000360620 MVPQ14764 893 aaKnown RBP14.91□□□□□ -0.02
EPHB4-202ENST00000360620 CEP170Q5SW79 1584 aa14.91□□□□□ -0.02
EPHB4-202ENST00000360620 ARHGEF12Q9NZN5 1544 aa14.9□□□□□ -0.02
EPHB4-202ENST00000360620 KIF14Q15058 1648 aa14.9□□□□□ -0.02
EPHB4-202ENST00000360620 RIPK4P57078 832 aa14.9□□□□□ -0.02
EPHB4-202ENST00000360620 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
EPHB4-202ENST00000360620 RAPGEF3O95398 923 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 UBE2Q2Q8WVN8 375 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 GRPEL1Q9HAV7 217 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 SEC24BO95487 1268 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 TMEM132EQ6IEE7 984 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 WDR63Q8IWG1 891 aa14.89□□□□□ -0.03
EPHB4-202ENST00000360620 RAPGEF6Q8TEU7 1601 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms