RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SLC12A5Q9H2X9 1139 aa15.6■□□□□ 0.09
COL20A1-201ENST00000358894 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
COL20A1-201ENST00000358894 PANK1Q8TE04 598 aa15.59■□□□□ 0.09
COL20A1-201ENST00000358894 PZPP20742 1482 aa15.59■□□□□ 0.09
COL20A1-201ENST00000358894 PMFBP1Q8TBY8 1022 aa15.58■□□□□ 0.09
COL20A1-201ENST00000358894 BCAR3O75815 825 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 MTHFSP49914 203 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 KDM6BO15054 1643 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 DISP3Q9P2K9 1392 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 PKNOX2Q96KN3 472 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 CABP2Q9NPB3 220 aa15.57■□□□□ 0.08
COL20A1-201ENST00000358894 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
COL20A1-201ENST00000358894 C20orf194Q5TEA3 1177 aa15.56■□□□□ 0.08
COL20A1-201ENST00000358894 GGNBP2Q9H3C7 697 aa15.56■□□□□ 0.08
COL20A1-201ENST00000358894 TEX14Q8IWB6 1497 aa15.56■□□□□ 0.08
COL20A1-201ENST00000358894 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
COL20A1-201ENST00000358894 IPO8O15397 1037 aaKnown RBP15.55■□□□□ 0.08
COL20A1-201ENST00000358894 MFAP1P55081 439 aaKnown RBP15.55■□□□□ 0.08
COL20A1-201ENST00000358894 TCP11L2Q8N4U5 519 aa15.55■□□□□ 0.08
COL20A1-201ENST00000358894 DHX29Q7Z478 1369 aaKnown RBP15.54■□□□□ 0.08
COL20A1-201ENST00000358894 APBB1O00213 710 aa15.54■□□□□ 0.08
COL20A1-201ENST00000358894 RUNDC1Q96C34 613 aa15.54■□□□□ 0.08
COL20A1-201ENST00000358894 DNMT1P26358 1616 aaKnown RBP15.54■□□□□ 0.08
COL20A1-201ENST00000358894 OSCARQ8IYS5 282 aa15.54■□□□□ 0.08
COL20A1-201ENST00000358894 RALGAPBQ86X10 1494 aa15.53■□□□□ 0.08
COL20A1-201ENST00000358894 CYB5RLQ6IPT4 315 aa15.53■□□□□ 0.08
COL20A1-201ENST00000358894 PBRM1Q86U86 1689 aa15.53■□□□□ 0.08
COL20A1-201ENST00000358894 BACH2Q9BYV9 841 aa15.53■□□□□ 0.08
COL20A1-201ENST00000358894 ARID3AQ99856 593 aa15.52■□□□□ 0.08
COL20A1-201ENST00000358894 HSP90AB1P08238 724 aaKnown RBP15.51■□□□□ 0.07
COL20A1-201ENST00000358894 TARBP1Q13395 1621 aaKnown RBP15.51■□□□□ 0.07
COL20A1-201ENST00000358894 ZKSCAN2Q63HK3 967 aa15.51■□□□□ 0.07
COL20A1-201ENST00000358894 ITSN2Q9NZM3 1697 aa15.51■□□□□ 0.07
COL20A1-201ENST00000358894 HSCBQ8IWL3 235 aa15.51■□□□□ 0.07
COL20A1-201ENST00000358894 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
COL20A1-201ENST00000358894 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
COL20A1-201ENST00000358894 CHMP4BQ9H444 224 aaKnown RBP15.49■□□□□ 0.07
COL20A1-201ENST00000358894 ADGRF5Q8IZF2 1346 aa15.49■□□□□ 0.07
COL20A1-201ENST00000358894 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
COL20A1-201ENST00000358894 RSPH6AQ9H0K4 717 aa15.49■□□□□ 0.07
COL20A1-201ENST00000358894 NGEFQ8N5V2 710 aa15.48■□□□□ 0.07
COL20A1-201ENST00000358894 NCLP19338 710 aaKnown RBP15.48■□□□□ 0.07
COL20A1-201ENST00000358894 SYCP2Q9BX26 1530 aa15.48■□□□□ 0.07
COL20A1-201ENST00000358894 RIPK4P57078 832 aa15.47■□□□□ 0.07
COL20A1-201ENST00000358894 TESK2Q96S53 571 aa15.47■□□□□ 0.07
COL20A1-201ENST00000358894 PRAG1Q86YV5 1406 aa15.47■□□□□ 0.07
COL20A1-201ENST00000358894 GCC2Q8IWJ2 1684 aa15.47■□□□□ 0.07
COL20A1-201ENST00000358894 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
COL20A1-201ENST00000358894 USP35Q9P2H5 1018 aa15.46■□□□□ 0.07
COL20A1-201ENST00000358894 DIAPH1O60610 1272 aaKnown RBP15.46■□□□□ 0.06
COL20A1-201ENST00000358894 SLFN5Q08AF3 891 aa15.46■□□□□ 0.06
COL20A1-201ENST00000358894 DZIP1LQ8IYY4 767 aaKnown RBP15.46■□□□□ 0.06
COL20A1-201ENST00000358894 SPATA31E1Q6ZUB1 1445 aa15.45■□□□□ 0.06
COL20A1-201ENST00000358894 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
COL20A1-201ENST00000358894 GOLGA6L22H0YM25 854 aa15.45■□□□□ 0.06
COL20A1-201ENST00000358894 BRPF3Q9ULD4 1205 aa15.45■□□□□ 0.06
COL20A1-201ENST00000358894 LMOD2Q6P5Q4 547 aa15.44■□□□□ 0.06
COL20A1-201ENST00000358894 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
COL20A1-201ENST00000358894 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
COL20A1-201ENST00000358894 HMOX1P09601 288 aa15.43■□□□□ 0.06
COL20A1-201ENST00000358894 HSP90AA2PQ14568 343 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-201ENST00000358894 PER1O15534 1290 aaPredicted RBP15.43■□□□□ 0.06
COL20A1-201ENST00000358894 DUSP27Q5VZP5 1158 aa15.43■□□□□ 0.06
COL20A1-201ENST00000358894 CASC1Q6TDU7 716 aa15.43■□□□□ 0.06
COL20A1-201ENST00000358894 PARD3Q8TEW0 1356 aa15.43■□□□□ 0.06
COL20A1-201ENST00000358894 AMER1Q5JTC6 1135 aaPredicted RBP15.42■□□□□ 0.06
COL20A1-201ENST00000358894 TPRNQ4KMQ1 711 aa15.42■□□□□ 0.06
COL20A1-201ENST00000358894 UBE2Q2Q8WVN8 375 aa15.42■□□□□ 0.06
COL20A1-201ENST00000358894 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 RTF1Q92541 710 aaKnown RBP15.41■□□□□ 0.06
COL20A1-201ENST00000358894 GSE1Q14687 1217 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 NUP160Q12769 1436 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 NFKBIBQ15653 356 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 NSD3Q9BZ95 1437 aa15.41■□□□□ 0.06
COL20A1-201ENST00000358894 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
COL20A1-201ENST00000358894 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
COL20A1-201ENST00000358894 ANKRD45Q5TZF3 282 aa15.39■□□□□ 0.05
COL20A1-201ENST00000358894 TRAPPC8Q9Y2L5 1435 aa15.39■□□□□ 0.05
COL20A1-201ENST00000358894 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
COL20A1-201ENST00000358894 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
COL20A1-201ENST00000358894 SHANK2Q9UPX8 1470 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 SCAF11Q99590 1463 aaKnown RBP15.38■□□□□ 0.05
COL20A1-201ENST00000358894 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 SLC4A10Q6U841 1118 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 UHRF1BP1Q6BDS2 1440 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 ADGRL1O94910 1474 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 COG3Q96JB2 828 aa15.38■□□□□ 0.05
COL20A1-201ENST00000358894 CEP170Q5SW79 1584 aa15.37■□□□□ 0.05
COL20A1-201ENST00000358894 LNPKQ9C0E8 428 aa15.37■□□□□ 0.05
COL20A1-201ENST00000358894 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
COL20A1-201ENST00000358894 PODXL2Q9NZ53 605 aa15.37■□□□□ 0.05
COL20A1-201ENST00000358894 PLCH2O75038 1416 aa15.36■□□□□ 0.05
COL20A1-201ENST00000358894 DENND4BO75064 1496 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-201ENST00000358894 PDZRN3Q9UPQ7 1066 aa15.36■□□□□ 0.05
COL20A1-201ENST00000358894 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-201ENST00000358894 CABP1Q9NZU7 370 aa15.35■□□□□ 0.05
COL20A1-201ENST00000358894 FANCAO15360 1455 aa15.35■□□□□ 0.05
COL20A1-201ENST00000358894 DNTTIP2Q5QJE6 756 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms