RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 ABCC5O15440 1437 aa14.33□□□□□ -0.12
CNOT3-202ENST00000358389 EIF3AQ14152 1382 aaKnown RBP14.32□□□□□ -0.12
CNOT3-202ENST00000358389 SKOR2Q2VWA4 1001 aaPredicted RBP14.32□□□□□ -0.12
CNOT3-202ENST00000358389 CADPSQ9ULU8 1353 aa14.32□□□□□ -0.12
CNOT3-202ENST00000358389 HMGXB3Q12766 1538 aa14.32□□□□□ -0.12
CNOT3-202ENST00000358389 PCDHB15Q9Y5E8 787 aa14.32□□□□□ -0.12
CNOT3-202ENST00000358389 MAP7D2Q96T17 732 aa14.31□□□□□ -0.12
CNOT3-202ENST00000358389 AMER1Q5JTC6 1135 aaPredicted RBP14.3□□□□□ -0.12
CNOT3-202ENST00000358389 TNNQ9UQP3 1299 aa14.3□□□□□ -0.12
CNOT3-202ENST00000358389 ROCK1Q13464 1354 aa14.3□□□□□ -0.12
CNOT3-202ENST00000358389 OFD1O75665 1012 aa14.3□□□□□ -0.12
CNOT3-202ENST00000358389 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
CNOT3-202ENST00000358389 PLEKHH2Q8IVE3 1493 aa14.29□□□□□ -0.12
CNOT3-202ENST00000358389 CDK13Q14004 1512 aaKnown RBP14.29□□□□□ -0.12
CNOT3-202ENST00000358389 BLMP54132 1417 aaPredicted RBP14.29□□□□□ -0.12
CNOT3-202ENST00000358389 TCOF1Q13428 1488 aaKnown RBP14.28□□□□□ -0.12
CNOT3-202ENST00000358389 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
CNOT3-202ENST00000358389 DMRT2Q9Y5R5 561 aa14.28□□□□□ -0.12
CNOT3-202ENST00000358389 DISP3Q9P2K9 1392 aa14.28□□□□□ -0.12
CNOT3-202ENST00000358389 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.12
CNOT3-202ENST00000358389 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
CNOT3-202ENST00000358389 ZMYM4Q5VZL5 1548 aa14.27□□□□□ -0.13
CNOT3-202ENST00000358389 GCC2Q8IWJ2 1684 aa14.27□□□□□ -0.13
CNOT3-202ENST00000358389 MAGI3Q5TCQ9 1506 aa14.27□□□□□ -0.13
CNOT3-202ENST00000358389 RIPK4P57078 832 aa14.26□□□□□ -0.13
CNOT3-202ENST00000358389 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
CNOT3-202ENST00000358389 KDM5CP41229 1560 aa14.26□□□□□ -0.13
CNOT3-202ENST00000358389 NKTRP30414 1462 aaKnown RBP14.26□□□□□ -0.13
CNOT3-202ENST00000358389 ITPRIPQ8IWB1 547 aa14.26□□□□□ -0.13
CNOT3-202ENST00000358389 PZPP20742 1482 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 AAMPQ13685 434 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 RLBP1P12271 317 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 PTMSP20962 102 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 MCTP1Q6DN14 999 aa14.25□□□□□ -0.13
CNOT3-202ENST00000358389 MPNDQ8N594 471 aa14.24□□□□□ -0.13
CNOT3-202ENST00000358389 ANKRD50Q9ULJ7 1429 aa14.24□□□□□ -0.13
CNOT3-202ENST00000358389 SSFA2P28290 1259 aa14.24□□□□□ -0.13
CNOT3-202ENST00000358389 PRDM4Q9UKN5 801 aa14.24□□□□□ -0.13
CNOT3-202ENST00000358389 SAFB2Q14151 953 aaKnown RBP eCLIP14.23□□□□□ -0.13
CNOT3-202ENST00000358389 EPRSP07814 1512 aaKnown RBP14.23□□□□□ -0.13
CNOT3-202ENST00000358389 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
CNOT3-202ENST00000358389 LNPKQ9C0E8 428 aa14.22□□□□□ -0.13
CNOT3-202ENST00000358389 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-202ENST00000358389 RNF214Q8ND24 703 aa14.22□□□□□ -0.13
CNOT3-202ENST00000358389 FOXD4L4Q8WXT5 416 aaPredicted RBP14.22□□□□□ -0.13
CNOT3-202ENST00000358389 LRRIQ1Q96JM4 1722 aa14.21□□□□□ -0.13
CNOT3-202ENST00000358389 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.13
CNOT3-202ENST00000358389 U2SURPO15042 1029 aaKnown RBP14.21□□□□□ -0.13
CNOT3-202ENST00000358389 ZNF521Q96K83 1311 aa14.21□□□□□ -0.14
CNOT3-202ENST00000358389 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 RARSP54136 660 aaKnown RBP14.2□□□□□ -0.14
CNOT3-202ENST00000358389 CBX1P83916 185 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 TESK2Q96S53 571 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 KIF14Q15058 1648 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 MTERF4Q7Z6M4 381 aaKnown RBP14.2□□□□□ -0.14
CNOT3-202ENST00000358389 WWC1Q8IX03 1113 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 ERBINQ96RT1 1412 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 MBD5Q9P267 1494 aa14.2□□□□□ -0.14
CNOT3-202ENST00000358389 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
CNOT3-202ENST00000358389 SMC4Q9NTJ3 1288 aa14.19□□□□□ -0.14
CNOT3-202ENST00000358389 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
CNOT3-202ENST00000358389 CFAP53Q96M91 514 aa14.19□□□□□ -0.14
CNOT3-202ENST00000358389 FANCD2Q9BXW9 1451 aa14.19□□□□□ -0.14
CNOT3-202ENST00000358389 HNRNPMP52272 730 aaKnown RBP eCLIP14.18□□□□□ -0.14
CNOT3-202ENST00000358389 SMAP1Q8IYB5 467 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-202ENST00000358389 DZIP1LQ8IYY4 767 aaKnown RBP14.18□□□□□ -0.14
CNOT3-202ENST00000358389 CIZ1Q9ULV3 898 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-202ENST00000358389 UHRF1BP1Q6BDS2 1440 aa14.18□□□□□ -0.14
CNOT3-202ENST00000358389 ZKSCAN2Q63HK3 967 aa14.17□□□□□ -0.14
CNOT3-202ENST00000358389 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
CNOT3-202ENST00000358389 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
CNOT3-202ENST00000358389 BBXQ8WY36 941 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-202ENST00000358389 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
CNOT3-202ENST00000358389 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-202ENST00000358389 FGD1P98174 961 aa14.17□□□□□ -0.14
CNOT3-202ENST00000358389 PPP1R9BQ96SB3 815 aa14.16□□□□□ -0.14
CNOT3-202ENST00000358389 PDE4CQ08493 712 aa14.16□□□□□ -0.14
CNOT3-202ENST00000358389 DYNC1I1O14576 645 aa14.16□□□□□ -0.14
CNOT3-202ENST00000358389 PRPF40AO75400 957 aaKnown RBP14.16□□□□□ -0.14
CNOT3-202ENST00000358389 C14orf37Q86TY3 774 aa14.16□□□□□ -0.14
CNOT3-202ENST00000358389 TSC1Q92574 1164 aa14.16□□□□□ -0.14
CNOT3-202ENST00000358389 K7ELQ4 463 aaPredicted RBP14.15□□□□□ -0.14
CNOT3-202ENST00000358389 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
CNOT3-202ENST00000358389 TRMT2AQ8IZ69 625 aaKnown RBP14.15□□□□□ -0.14
CNOT3-202ENST00000358389 BAG4O95429 457 aaKnown RBP14.14□□□□□ -0.15
CNOT3-202ENST00000358389 TCP11L2Q8N4U5 519 aa14.14□□□□□ -0.15
CNOT3-202ENST00000358389 RBM27Q9P2N5 1060 aaKnown RBP14.14□□□□□ -0.15
CNOT3-202ENST00000358389 KLHL40Q2TBA0 621 aa14.14□□□□□ -0.15
CNOT3-202ENST00000358389 SASS6Q6UVJ0 657 aa14.14□□□□□ -0.15
CNOT3-202ENST00000358389 ANKRD45Q5TZF3 282 aa14.14□□□□□ -0.15
CNOT3-202ENST00000358389 FAM177BA6PVY3 158 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 ZNF692Q9BU19 519 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-202ENST00000358389 RBSNQ9H1K0 784 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 ABCA10Q8WWZ4 1543 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 INSRP06213 1382 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 NINLQ9Y2I6 1382 aa14.13□□□□□ -0.15
CNOT3-202ENST00000358389 CARMIL2Q6F5E8 1435 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms