RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 TNRQ92752 1358 aa12.78□□□□□ -0.36
SMARCAL1-202ENST00000358207 IRX6P78412 446 aaPredicted RBP12.77□□□□□ -0.36
SMARCAL1-202ENST00000358207 IQGAP3Q86VI3 1631 aa12.77□□□□□ -0.36
SMARCAL1-202ENST00000358207 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.36
SMARCAL1-202ENST00000358207 TRIM52Q96A61 297 aa12.77□□□□□ -0.37
SMARCAL1-202ENST00000358207 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.37
SMARCAL1-202ENST00000358207 HNRNPMP52272 730 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMARCAL1-202ENST00000358207 DAPK1P53355 1430 aa12.76□□□□□ -0.37
SMARCAL1-202ENST00000358207 RRP7BPQ9NSQ0 103 aa12.76□□□□□ -0.37
SMARCAL1-202ENST00000358207 ABCC5O15440 1437 aa12.75□□□□□ -0.37
SMARCAL1-202ENST00000358207 ADGRB3O60242 1522 aa12.75□□□□□ -0.37
SMARCAL1-202ENST00000358207 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMARCAL1-202ENST00000358207 FGD6Q6ZV73 1430 aa12.75□□□□□ -0.37
SMARCAL1-202ENST00000358207 DIP2AQ14689 1571 aa12.74□□□□□ -0.37
SMARCAL1-202ENST00000358207 RSPH6AQ9H0K4 717 aa12.73□□□□□ -0.37
SMARCAL1-202ENST00000358207 A0A0U1RQG5 324 aaPredicted RBP12.73□□□□□ -0.37
SMARCAL1-202ENST00000358207 GLIPR1L2Q4G1C9 344 aa12.73□□□□□ -0.37
SMARCAL1-202ENST00000358207 NOS1P29475 1434 aa12.72□□□□□ -0.37
SMARCAL1-202ENST00000358207 HSPA2P54652 639 aa12.72□□□□□ -0.37
SMARCAL1-202ENST00000358207 CEBPAP49715 358 aaPredicted RBP12.7□□□□□ -0.38
SMARCAL1-202ENST00000358207 RRBP1Q9P2E9 1410 aaKnown RBP12.7□□□□□ -0.38
SMARCAL1-202ENST00000358207 CHD2O14647 1828 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-202ENST00000358207 NPHP4O75161 1426 aaPredicted RBP12.69□□□□□ -0.38
SMARCAL1-202ENST00000358207 MLECQ14165 292 aa12.69□□□□□ -0.38
SMARCAL1-202ENST00000358207 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
SMARCAL1-202ENST00000358207 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
SMARCAL1-202ENST00000358207 ROCK1Q13464 1354 aa12.68□□□□□ -0.38
SMARCAL1-202ENST00000358207 IPO9Q96P70 1041 aaKnown RBP12.68□□□□□ -0.38
SMARCAL1-202ENST00000358207 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
SMARCAL1-202ENST00000358207 FGD1P98174 961 aa12.67□□□□□ -0.38
SMARCAL1-202ENST00000358207 SCAF11Q99590 1463 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-202ENST00000358207 E9PCH4 1651 aa12.67□□□□□ -0.38
SMARCAL1-202ENST00000358207 NKTRP30414 1462 aaKnown RBP12.67□□□□□ -0.38
SMARCAL1-202ENST00000358207 RBM10P98175 930 aaKnown RBP12.66□□□□□ -0.38
SMARCAL1-202ENST00000358207 AAMPQ13685 434 aa12.66□□□□□ -0.38
SMARCAL1-202ENST00000358207 MYO5BQ9ULV0 1848 aa12.65□□□□□ -0.38
SMARCAL1-202ENST00000358207 SIN3AQ96ST3 1273 aa12.65□□□□□ -0.38
SMARCAL1-202ENST00000358207 LRRC7Q96NW7 1537 aa12.65□□□□□ -0.38
SMARCAL1-202ENST00000358207 PDE4CQ08493 712 aa12.64□□□□□ -0.39
SMARCAL1-202ENST00000358207 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
SMARCAL1-202ENST00000358207 KIF15Q9NS87 1388 aa12.64□□□□□ -0.39
SMARCAL1-202ENST00000358207 SPHKAPQ2M3C7 1700 aa12.64□□□□□ -0.39
SMARCAL1-202ENST00000358207 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
SMARCAL1-202ENST00000358207 LAMC1P11047 1609 aa12.63□□□□□ -0.39
SMARCAL1-202ENST00000358207 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
SMARCAL1-202ENST00000358207 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
SMARCAL1-202ENST00000358207 ANKRD30AQ9BXX3 1397 aa12.62□□□□□ -0.39
SMARCAL1-202ENST00000358207 NEFMP07197 916 aa12.62□□□□□ -0.39
SMARCAL1-202ENST00000358207 FOXD1Q16676 465 aa12.62□□□□□ -0.39
SMARCAL1-202ENST00000358207 TSPY4P0CV99 314 aa12.61□□□□□ -0.39
SMARCAL1-202ENST00000358207 TSPY10P0CW01 314 aa12.61□□□□□ -0.39
SMARCAL1-202ENST00000358207 PPP4R2Q9NY27 417 aa12.61□□□□□ -0.39
SMARCAL1-202ENST00000358207 DHX57Q6P158 1386 aaKnown RBP12.61□□□□□ -0.39
SMARCAL1-202ENST00000358207 ZFYVE9O95405 1425 aa12.61□□□□□ -0.39
SMARCAL1-202ENST00000358207 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
SMARCAL1-202ENST00000358207 XRN1Q8IZH2 1706 aaKnown RBP12.6□□□□□ -0.39
SMARCAL1-202ENST00000358207 THEMISQ8N1K5 641 aaPredicted RBP12.59□□□□□ -0.39
SMARCAL1-202ENST00000358207 SETBP1Q9Y6X0 1596 aa12.59□□□□□ -0.39
SMARCAL1-202ENST00000358207 SETD1AO15047 1707 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-202ENST00000358207 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-202ENST00000358207 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-202ENST00000358207 KIF3BO15066 747 aa12.58□□□□□ -0.4
SMARCAL1-202ENST00000358207 ANP32AP39687 249 aaKnown RBP12.58□□□□□ -0.4
SMARCAL1-202ENST00000358207 SETD5Q9C0A6 1442 aa12.57□□□□□ -0.4
SMARCAL1-202ENST00000358207 KANK1Q14678 1352 aa12.57□□□□□ -0.4
SMARCAL1-202ENST00000358207 NCKAP5LQ9HCH0 1330 aa12.57□□□□□ -0.4
SMARCAL1-202ENST00000358207 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
SMARCAL1-202ENST00000358207 NRXN3Q9Y4C0 1643 aa12.57□□□□□ -0.4
SMARCAL1-202ENST00000358207 TMEM2Q9UHN6 1383 aa12.56□□□□□ -0.4
SMARCAL1-202ENST00000358207 FAM43AQ8N2R8 423 aa12.55□□□□□ -0.4
SMARCAL1-202ENST00000358207 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
SMARCAL1-202ENST00000358207 SHPRHQ149N8 1683 aa12.55□□□□□ -0.4
SMARCAL1-202ENST00000358207 GGT6Q6P531 493 aa12.54□□□□□ -0.4
SMARCAL1-202ENST00000358207 ANKLE2Q86XL3 938 aa12.54□□□□□ -0.4
SMARCAL1-202ENST00000358207 PDIA4P13667 645 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-202ENST00000358207 HIRIP3Q9BW71 556 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-202ENST00000358207 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
SMARCAL1-202ENST00000358207 GSE1Q14687 1217 aa12.53□□□□□ -0.4
SMARCAL1-202ENST00000358207 AHDC1Q5TGY3 1603 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-202ENST00000358207 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
SMARCAL1-202ENST00000358207 TRPM2O94759 1503 aa12.53□□□□□ -0.4
SMARCAL1-202ENST00000358207 ZNF335Q9H4Z2 1342 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-202ENST00000358207 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.41
SMARCAL1-202ENST00000358207 CCER2I3L3R5 266 aa12.52□□□□□ -0.41
SMARCAL1-202ENST00000358207 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
SMARCAL1-202ENST00000358207 KIF1BO60333 1816 aa12.51□□□□□ -0.41
SMARCAL1-202ENST00000358207 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
SMARCAL1-202ENST00000358207 CFAP65Q6ZU64 1925 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-202ENST00000358207 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
SMARCAL1-202ENST00000358207 HSP90AA2PQ14568 343 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-202ENST00000358207 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
SMARCAL1-202ENST00000358207 FBXO31Q5XUX0 539 aaPredicted RBP12.5□□□□□ -0.41
SMARCAL1-202ENST00000358207 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-202ENST00000358207 ROBO1Q9Y6N7 1651 aa12.49□□□□□ -0.41
SMARCAL1-202ENST00000358207 DCAF11Q8TEB1 546 aa12.49□□□□□ -0.41
SMARCAL1-202ENST00000358207 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-202ENST00000358207 PPLO60437 1756 aa12.48□□□□□ -0.41
SMARCAL1-202ENST00000358207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.412e-6■■■□□ 16.8
SMARCAL1-202ENST00000358207 SLC52A1Q9NWF4 448 aa12.48□□□□□ -0.41
SMARCAL1-202ENST00000358207 DCCP43146 1447 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms