RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 USP47Q96K76 1375 aa14.18□□□□□ -0.14
CAPN3-205ENST00000357568 SALL2Q9Y467 1007 aaPredicted RBP14.18□□□□□ -0.14
CAPN3-205ENST00000357568 E9PCH4 1651 aa14.18□□□□□ -0.14
CAPN3-205ENST00000357568 UNC13BO14795 1591 aa14.17□□□□□ -0.14
CAPN3-205ENST00000357568 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
CAPN3-205ENST00000357568 RALBP1Q15311 655 aa14.15□□□□□ -0.14
CAPN3-205ENST00000357568 DDRGK1Q96HY6 314 aa14.15□□□□□ -0.14
CAPN3-205ENST00000357568 BACH2Q9BYV9 841 aa14.15□□□□□ -0.14
CAPN3-205ENST00000357568 PRDM15P57071 1507 aaPredicted RBP14.15□□□□□ -0.14
CAPN3-205ENST00000357568 ZC3H13Q5T200 1668 aaKnown RBP14.15□□□□□ -0.14
CAPN3-205ENST00000357568 KDM5DQ9BY66 1539 aa14.15□□□□□ -0.14
CAPN3-205ENST00000357568 MROH1Q8NDA8 1641 aa14.14□□□□□ -0.15
CAPN3-205ENST00000357568 ADAMTSL3P82987 1691 aa14.14□□□□□ -0.15
CAPN3-205ENST00000357568 SENP3Q9H4L4 574 aaPredicted RBP14.13□□□□□ -0.15
CAPN3-205ENST00000357568 MYBBP1AQ9BQG0 1328 aaKnown RBP14.13□□□□□ -0.15
CAPN3-205ENST00000357568 VWDEQ8N2E2 1590 aa14.13□□□□□ -0.15
CAPN3-205ENST00000357568 KIF3BO15066 747 aa14.13□□□□□ -0.15
CAPN3-205ENST00000357568 PDE4AP27815 886 aa14.13□□□□□ -0.15
CAPN3-205ENST00000357568 TMC1Q8TDI8 760 aa14.12□□□□□ -0.15
CAPN3-205ENST00000357568 MROH2AA6NES4 1674 aa14.12□□□□□ -0.15
CAPN3-205ENST00000357568 EIF5BO60841 1220 aaKnown RBP14.11□□□□□ -0.15
CAPN3-205ENST00000357568 LMTK2Q8IWU2 1503 aa14.11□□□□□ -0.15
CAPN3-205ENST00000357568 FER1L4A9Z1Z3 1794 aa14.11□□□□□ -0.15
CAPN3-205ENST00000357568 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
CAPN3-205ENST00000357568 IQGAP3Q86VI3 1631 aa14.11□□□□□ -0.15
CAPN3-205ENST00000357568 KANK1Q14678 1352 aa14.1□□□□□ -0.15
CAPN3-205ENST00000357568 NEFMP07197 916 aa14.09□□□□□ -0.15
CAPN3-205ENST00000357568 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
CAPN3-205ENST00000357568 FOXD1Q16676 465 aa14.08□□□□□ -0.15
CAPN3-205ENST00000357568 ABCC3O15438 1527 aa14.08□□□□□ -0.16
CAPN3-205ENST00000357568 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
CAPN3-205ENST00000357568 CLTCQ00610 1675 aaKnown RBP14.07□□□□□ -0.16
CAPN3-205ENST00000357568 CEP152O94986 1710 aa14.07□□□□□ -0.16
CAPN3-205ENST00000357568 TET3O43151 1660 aa14.07□□□□□ -0.16
CAPN3-205ENST00000357568 GGT6Q6P531 493 aa14.07□□□□□ -0.16
CAPN3-205ENST00000357568 CAMSAP1Q5T5Y3 1602 aa14.06□□□□□ -0.16
CAPN3-205ENST00000357568 IL27Q8NEV9 243 aa14.06□□□□□ -0.16
CAPN3-205ENST00000357568 PARD3Q8TEW0 1356 aa14.05□□□□□ -0.16
CAPN3-205ENST00000357568 EXOC6Q8TAG9 804 aa14.05□□□□□ -0.16
CAPN3-205ENST00000357568 RIMS1Q86UR5 1692 aaKnown RBP14.05□□□□□ -0.16
CAPN3-205ENST00000357568 BLMP54132 1417 aaPredicted RBP14.04□□□□□ -0.16
CAPN3-205ENST00000357568 ARHGAP31Q2M1Z3 1444 aa14.04□□□□□ -0.16
CAPN3-205ENST00000357568 NUP155O75694 1391 aa14.04□□□□□ -0.16
CAPN3-205ENST00000357568 MLECQ14165 292 aa14.04□□□□□ -0.16
CAPN3-205ENST00000357568 NLRP13Q86W25 1043 aa14.03□□□□□ -0.16
CAPN3-205ENST00000357568 ESF1Q9H501 851 aaKnown RBP14.03□□□□□ -0.16
CAPN3-205ENST00000357568 LAMC1P11047 1609 aa14.03□□□□□ -0.16
CAPN3-205ENST00000357568 EFCAB6Q5THR3 1501 aa14.03□□□□□ -0.16
CAPN3-205ENST00000357568 GSE1Q14687 1217 aa14.01□□□□□ -0.17
CAPN3-205ENST00000357568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.01□□□□□ -0.17
CAPN3-205ENST00000357568 C3P01024 1663 aa14.01□□□□□ -0.17
CAPN3-205ENST00000357568 NPM2Q86SE8 214 aaKnown RBP13.99□□□□□ -0.17
CAPN3-205ENST00000357568 LAS1LQ9Y4W2 734 aaKnown RBP13.99□□□□□ -0.17
CAPN3-205ENST00000357568 ZMYM3Q14202 1370 aa13.99□□□□□ -0.17
CAPN3-205ENST00000357568 KDM4FA0A1W2PPD8 638 aa13.98□□□□□ -0.17
CAPN3-205ENST00000357568 PTPRMP28827 1452 aa13.98□□□□□ -0.17
CAPN3-205ENST00000357568 NPATQ14207 1427 aa13.98□□□□□ -0.17
CAPN3-205ENST00000357568 PREX1Q8TCU6 1659 aa13.97□□□□□ -0.17
CAPN3-205ENST00000357568 SPATA31D1Q6ZQQ2 1576 aa13.97□□□□□ -0.17
CAPN3-205ENST00000357568 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
CAPN3-205ENST00000357568 KDM2BQ8NHM5 1336 aa13.96□□□□□ -0.18
CAPN3-205ENST00000357568 PKD2Q13563 968 aa13.95□□□□□ -0.18
CAPN3-205ENST00000357568 TRPM1Q7Z4N2 1603 aa13.95□□□□□ -0.18
CAPN3-205ENST00000357568 ERVK-7P63135 1459 aa13.94□□□□□ -0.18
CAPN3-205ENST00000357568 NFKBIBQ15653 356 aa13.94□□□□□ -0.18
CAPN3-205ENST00000357568 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
CAPN3-205ENST00000357568 SPHKAPQ2M3C7 1700 aa13.94□□□□□ -0.18
CAPN3-205ENST00000357568 GPRASP1Q5JY77 1395 aa13.94□□□□□ -0.18
CAPN3-205ENST00000357568 NOS1P29475 1434 aa13.94□□□□□ -0.18
CAPN3-205ENST00000357568 PTPRTO14522 1441 aa13.93□□□□□ -0.18
CAPN3-205ENST00000357568 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
CAPN3-205ENST00000357568 TRPM2O94759 1503 aa13.91□□□□□ -0.18
CAPN3-205ENST00000357568 FAM161AQ3B820 660 aa13.9□□□□□ -0.18
CAPN3-205ENST00000357568 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
CAPN3-205ENST00000357568 SETD1BQ9UPS6 1966 aaKnown RBP13.9□□□□□ -0.18
CAPN3-205ENST00000357568 ST20-MTHFSA0A0A6YYL1 179 aa13.9□□□□□ -0.18
CAPN3-205ENST00000357568 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
CAPN3-205ENST00000357568 SYNMO15061 1565 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 PER1O15534 1290 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-205ENST00000357568 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
CAPN3-205ENST00000357568 PIK3C2BO00750 1634 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
CAPN3-205ENST00000357568 TNRQ92752 1358 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 NLRP1Q9C000 1473 aa13.89□□□□□ -0.19
CAPN3-205ENST00000357568 KDM5AP29375 1690 aaKnown RBP13.88□□□□□ -0.19
CAPN3-205ENST00000357568 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
CAPN3-205ENST00000357568 PKNOX2Q96KN3 472 aa13.88□□□□□ -0.19
CAPN3-205ENST00000357568 VIRMAQ69YN4 1812 aaKnown RBP13.88□□□□□ -0.19
CAPN3-205ENST00000357568 MYO3AQ8NEV4 1616 aa13.88□□□□□ -0.19
CAPN3-205ENST00000357568 CFAP65Q6ZU64 1925 aaKnown RBP13.87□□□□□ -0.19
CAPN3-205ENST00000357568 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-205ENST00000357568 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
CAPN3-205ENST00000357568 FRAT1Q92837 279 aaPredicted RBP13.87□□□□□ -0.19
CAPN3-205ENST00000357568 BRPF3Q9ULD4 1205 aa13.87□□□□□ -0.19
CAPN3-205ENST00000357568 SLC52A1Q9NWF4 448 aa13.86□□□□□ -0.19
CAPN3-205ENST00000357568 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms