RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 PARD3Q8TEW0 1356 aa8.69□□□□□ -1.02
RTN4-203ENST00000357376 KIF14Q15058 1648 aa8.69□□□□□ -1.02
RTN4-203ENST00000357376 HSCBQ8IWL3 235 aa8.69□□□□□ -1.02
RTN4-203ENST00000357376 KIF21AQ7Z4S6 1674 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 PLEKHH2Q8IVE3 1493 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
RTN4-203ENST00000357376 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
RTN4-203ENST00000357376 ANP32BQ92688 251 aaKnown RBP8.68□□□□□ -1.02
RTN4-203ENST00000357376 TESK2Q96S53 571 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 SLFN5Q08AF3 891 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 SLC12A5Q9H2X9 1139 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 ATP10BO94823 1461 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 TCP11L2Q8N4U5 519 aa8.68□□□□□ -1.02
RTN4-203ENST00000357376 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
RTN4-203ENST00000357376 LRPPRCP42704 1394 aaKnown RBP8.68□□□□□ -1.02
RTN4-203ENST00000357376 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
RTN4-203ENST00000357376 MTHFSP49914 203 aa8.67□□□□□ -1.02
RTN4-203ENST00000357376 PRAG1Q86YV5 1406 aa8.67□□□□□ -1.02
RTN4-203ENST00000357376 NCLP19338 710 aaKnown RBP8.66□□□□□ -1.02
RTN4-203ENST00000357376 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
RTN4-203ENST00000357376 TRIM44Q96DX7 344 aaPredicted RBP8.66□□□□□ -1.02
RTN4-203ENST00000357376 ESF1Q9H501 851 aaKnown RBP8.66□□□□□ -1.02
RTN4-203ENST00000357376 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
RTN4-203ENST00000357376 NAP1L5Q96NT1 182 aaPredicted RBP8.66□□□□□ -1.02
RTN4-203ENST00000357376 ELL2O00472 640 aaPredicted RBP8.65□□□□□ -1.02
RTN4-203ENST00000357376 APBB1O00213 710 aa8.65□□□□□ -1.02
RTN4-203ENST00000357376 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.02
RTN4-203ENST00000357376 SOX12O15370 315 aa8.65□□□□□ -1.02
RTN4-203ENST00000357376 UHRF1BP1Q6BDS2 1440 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 L1TD1Q5T7N2 865 aaKnown RBP8.64□□□□□ -1.03
RTN4-203ENST00000357376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.64□□□□□ -1.031e-7■■■□□ 14.8
RTN4-203ENST00000357376 PLEKHH1Q9ULM0 1364 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 GGNBP2Q9H3C7 697 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 FAM135AQ9P2D6 1515 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 ITSN2Q9NZM3 1697 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 AMER1Q5JTC6 1135 aaPredicted RBP8.64□□□□□ -1.03
RTN4-203ENST00000357376 DZIP1LQ8IYY4 767 aaKnown RBP8.64□□□□□ -1.03
RTN4-203ENST00000357376 TSR2Q969E8 191 aaKnown RBP8.64□□□□□ -1.03
RTN4-203ENST00000357376 CABP2Q9NPB3 220 aa8.64□□□□□ -1.03
RTN4-203ENST00000357376 PBRM1Q86U86 1689 aa8.63□□□□□ -1.03
RTN4-203ENST00000357376 MINK1Q8N4C8 1332 aaPredicted RBP8.63□□□□□ -1.03
RTN4-203ENST00000357376 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
RTN4-203ENST00000357376 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
RTN4-203ENST00000357376 PDZRN3Q9UPQ7 1066 aa8.63□□□□□ -1.03
RTN4-203ENST00000357376 TARBP1Q13395 1621 aaKnown RBP8.63□□□□□ -1.03
RTN4-203ENST00000357376 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
RTN4-203ENST00000357376 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
RTN4-203ENST00000357376 IGHDP01880 384 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 MLECQ14165 292 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 HDGFL2Q7Z4V5 671 aaPredicted RBP8.62□□□□□ -1.03
RTN4-203ENST00000357376 SCAPERQ9BY12 1400 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 ADGRL2O95490 1459 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 GOLGA6L3A6NEY3 463 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 SPINK5Q9NQ38 1064 aaPredicted RBP8.62□□□□□ -1.03
RTN4-203ENST00000357376 LRRIQ1Q96JM4 1722 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 EVC2Q86UK5 1308 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 ADGRF5Q8IZF2 1346 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 ARHGEF12Q9NZN5 1544 aa8.62□□□□□ -1.03
RTN4-203ENST00000357376 NGEFQ8N5V2 710 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 STAC3Q96MF2 364 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 SYCP2Q9BX26 1530 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 PLEKHG5O94827 1062 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 RIPK4P57078 832 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 PNNQ9H307 717 aaKnown RBP8.61□□□□□ -1.03
RTN4-203ENST00000357376 TERF2IPQ9NYB0 399 aa8.61□□□□□ -1.03
RTN4-203ENST00000357376 KDM5CP41229 1560 aa8.6□□□□□ -1.03
RTN4-203ENST00000357376 EXOSC9Q06265 439 aaKnown RBP8.6□□□□□ -1.03
RTN4-203ENST00000357376 C8orf34Q49A92 452 aa8.6□□□□□ -1.03
RTN4-203ENST00000357376 A2MP01023 1474 aa8.6□□□□□ -1.03
RTN4-203ENST00000357376 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
RTN4-203ENST00000357376 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
RTN4-203ENST00000357376 BCORL1Q5H9F3 1711 aa8.59□□□□□ -1.03
RTN4-203ENST00000357376 C22orf23Q9BZE7 217 aa8.59□□□□□ -1.03
RTN4-203ENST00000357376 NSD3Q9BZ95 1437 aa8.59□□□□□ -1.03
RTN4-203ENST00000357376 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
RTN4-203ENST00000357376 VGFO15240 615 aaPredicted RBP8.59□□□□□ -1.03
RTN4-203ENST00000357376 DDX19BQ9UMR2 479 aa8.59□□□□□ -1.03
RTN4-203ENST00000357376 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
RTN4-203ENST00000357376 RARSP54136 660 aaKnown RBP8.58□□□□□ -1.04
RTN4-203ENST00000357376 TNNQ9UQP3 1299 aa8.58□□□□□ -1.04
RTN4-203ENST00000357376 MBD5Q9P267 1494 aa8.58□□□□□ -1.04
RTN4-203ENST00000357376 SHANK2Q9UPX8 1470 aa8.58□□□□□ -1.04
RTN4-203ENST00000357376 DMRT2Q9Y5R5 561 aa8.58□□□□□ -1.04
RTN4-203ENST00000357376 HMOX1P09601 288 aa8.58□□□□□ -1.04
RTN4-203ENST00000357376 SCAF11Q99590 1463 aaKnown RBP8.58□□□□□ -1.04
RTN4-203ENST00000357376 CHMP4BQ9H444 224 aaKnown RBP8.57□□□□□ -1.04
RTN4-203ENST00000357376 DIAPH1O60610 1272 aaKnown RBP8.57□□□□□ -1.04
RTN4-203ENST00000357376 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
RTN4-203ENST00000357376 NUTM2FA1L443 756 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 CASC1Q6TDU7 716 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 ZBTB7CA1YPR0 619 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 MVPQ14764 893 aaKnown RBP8.56□□□□□ -1.04
RTN4-203ENST00000357376 CARD14Q9BXL6 1004 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 SEC24BO95487 1268 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 C14orf37Q86TY3 774 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 CHMP5Q9NZZ3 219 aa8.56□□□□□ -1.04
RTN4-203ENST00000357376 NOB1Q9ULX3 412 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms