RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
TOP3B-201ENST00000357179 PANK3Q9H999 370 aa19■□□□□ 0.63
TOP3B-201ENST00000357179 RRP9O43818 475 aaKnown RBP18.99■□□□□ 0.63
TOP3B-201ENST00000357179 RGL3Q3MIN7 710 aa18.99■□□□□ 0.63
TOP3B-201ENST00000357179 CC2D1BQ5T0F9 858 aaKnown RBP18.98■□□□□ 0.63
TOP3B-201ENST00000357179 DUOX2Q9NRD8 1548 aa18.98■□□□□ 0.63
TOP3B-201ENST00000357179 HSP90AA2PQ14568 343 aaPredicted RBP18.98■□□□□ 0.63
TOP3B-201ENST00000357179 C20orf194Q5TEA3 1177 aa18.96■□□□□ 0.63
TOP3B-201ENST00000357179 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
TOP3B-201ENST00000357179 CLCN1P35523 988 aa18.95■□□□□ 0.62
TOP3B-201ENST00000357179 NAP1L5Q96NT1 182 aaPredicted RBP18.95■□□□□ 0.62
TOP3B-201ENST00000357179 TTC37Q6PGP7 1564 aa18.94■□□□□ 0.62
TOP3B-201ENST00000357179 PNNQ9H307 717 aaKnown RBP18.94■□□□□ 0.62
TOP3B-201ENST00000357179 CLASP1Q7Z460 1538 aa18.94■□□□□ 0.62
TOP3B-201ENST00000357179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.94■□□□□ 0.625e-7■□□□□ 8.9
TOP3B-201ENST00000357179 HSP90AA1P07900 732 aaKnown RBP18.93■□□□□ 0.62
TOP3B-201ENST00000357179 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
TOP3B-201ENST00000357179 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
TOP3B-201ENST00000357179 IQGAP1P46940 1657 aa18.91■□□□□ 0.62
TOP3B-201ENST00000357179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.624e-7■■■□□ 14.6
TOP3B-201ENST00000357179 SYNMO15061 1565 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 USP19O94966 1318 aa18.9■□□□□ 0.62
TOP3B-201ENST00000357179 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 MADDQ8WXG6 1647 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 ZNF521Q96K83 1311 aa18.89■□□□□ 0.61
TOP3B-201ENST00000357179 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.612e-7■■■□□ 15.7
TOP3B-201ENST00000357179 PIK3C2GO75747 1445 aa18.88■□□□□ 0.61
TOP3B-201ENST00000357179 PPP2R1AP30153 589 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 CDCA8Q53HL2 280 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 DUSP27Q5VZP5 1158 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 FSD2A1L4K1 749 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 RGS3P49796 1198 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.86■□□□□ 0.61
TOP3B-201ENST00000357179 SCAPERQ9BY12 1400 aa18.86■□□□□ 0.61
TOP3B-201ENST00000357179 PLEKHH1Q9ULM0 1364 aa18.86■□□□□ 0.61
TOP3B-201ENST00000357179 WDR43Q15061 677 aaKnown RBP eCLIP18.86■□□□□ 0.61
TOP3B-201ENST00000357179 BECN1Q14457 450 aa18.85■□□□□ 0.61
TOP3B-201ENST00000357179 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
TOP3B-201ENST00000357179 ANTXR1Q9H6X2 564 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SPHKAPQ2M3C7 1700 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SCAF11Q99590 1463 aaKnown RBP18.84■□□□□ 0.61
TOP3B-201ENST00000357179 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA2Q08379 1002 aa18.83■□□□□ 0.61
TOP3B-201ENST00000357179 GOLGA6L3A6NEY3 463 aa18.83■□□□□ 0.6
TOP3B-201ENST00000357179 TRPM2O94759 1503 aa18.83■□□□□ 0.6
TOP3B-201ENST00000357179 ABCC2Q92887 1545 aa18.82■□□□□ 0.6
TOP3B-201ENST00000357179 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
TOP3B-201ENST00000357179 SLKQ9H2G2 1235 aaPredicted RBP18.81■□□□□ 0.6
TOP3B-201ENST00000357179 CEP152O94986 1710 aa18.81■□□□□ 0.6
TOP3B-201ENST00000357179 PLCH2O75038 1416 aa18.8■□□□□ 0.6
TOP3B-201ENST00000357179 TRMT2AQ8IZ69 625 aaKnown RBP18.8■□□□□ 0.6
TOP3B-201ENST00000357179 SLFN5Q08AF3 891 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 PTPRTO14522 1441 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 MYOM1P52179 1685 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 PANK2Q9BZ23 570 aa18.79■□□□□ 0.6
TOP3B-201ENST00000357179 ABCC1P33527 1531 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 NLRP1Q9C000 1473 aa18.78■□□□□ 0.6
TOP3B-201ENST00000357179 NEURL4Q96JN8 1562 aa18.77■□□□□ 0.6
TOP3B-201ENST00000357179 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
TOP3B-201ENST00000357179 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
TOP3B-201ENST00000357179 RTEL1-TNFRSF6BF6WH68 1400 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 SEC24BO95487 1268 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 EFCAB2Q5VUJ9 269 aa18.75■□□□□ 0.59
TOP3B-201ENST00000357179 NKTRP30414 1462 aaKnown RBP18.75■□□□□ 0.59
TOP3B-201ENST00000357179 KDM5AP29375 1690 aaKnown RBP18.74■□□□□ 0.59
TOP3B-201ENST00000357179 ARXQ96QS3 562 aa18.74■□□□□ 0.59
TOP3B-201ENST00000357179 DEPDC5O75140 1603 aa18.73■□□□□ 0.59
TOP3B-201ENST00000357179 CLTCL1P53675 1640 aa18.73■□□□□ 0.59
TOP3B-201ENST00000357179 CHD1O14646 1710 aa18.72■□□□□ 0.59
TOP3B-201ENST00000357179 MRE11P49959 708 aa18.72■□□□□ 0.59
TOP3B-201ENST00000357179 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
TOP3B-201ENST00000357179 TET3O43151 1660 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 MCM4P33991 863 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 ESPNB1AK53 854 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 ARAP3Q8WWN8 1544 aa18.71■□□□□ 0.59
TOP3B-201ENST00000357179 TRAPPC8Q9Y2L5 1435 aa18.71■□□□□ 0.58
TOP3B-201ENST00000357179 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 E9PSI1 815 aa18.7■□□□□ 0.58
TOP3B-201ENST00000357179 TPM2P07951 284 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 PODXL2Q9NZ53 605 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 TBC1D2Q9BYX2 928 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 PDCL3Q9H2J4 239 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 UHRF1BP1LA0JNW5 1464 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 VWDEQ8N2E2 1590 aa18.68■□□□□ 0.58
TOP3B-201ENST00000357179 IGHDP01880 384 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
TOP3B-201ENST00000357179 ERBB4Q15303 1308 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
TOP3B-201ENST00000357179 MYH16Q9H6N6 1097 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 MYOM2P54296 1465 aa18.67■□□□□ 0.58
TOP3B-201ENST00000357179 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
TOP3B-201ENST00000357179 TBC1D32Q96NH3 1257 aa18.66■□□□□ 0.58
TOP3B-201ENST00000357179 APAF1O14727 1248 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms