RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MAP3K4Q9Y6R4 1608 aa24.06■■□□□ 1.44
NPAS3-202ENST00000356141 DIP2CQ9Y2E4 1556 aa24.05■■□□□ 1.44
NPAS3-202ENST00000356141 IDI1Q13907 227 aa24.05■■□□□ 1.44
NPAS3-202ENST00000356141 TMC1Q8TDI8 760 aa24.05■■□□□ 1.44
NPAS3-202ENST00000356141 DIP2BQ9P265 1576 aa24.04■■□□□ 1.44
NPAS3-202ENST00000356141 ARID4BQ4LE39 1312 aaPredicted RBP24.03■■□□□ 1.44
NPAS3-202ENST00000356141 STK26Q9P289 416 aa24.03■■□□□ 1.44
NPAS3-202ENST00000356141 EIF2AK4Q9P2K8 1649 aaKnown RBP24.02■■□□□ 1.44
NPAS3-202ENST00000356141 GPRASP1Q5JY77 1395 aa24.01■■□□□ 1.43
NPAS3-202ENST00000356141 RNF17Q9BXT8 1623 aaKnown RBP24.01■■□□□ 1.43
NPAS3-202ENST00000356141 MROH2AA6NES4 1674 aa24.01■■□□□ 1.43
NPAS3-202ENST00000356141 RICTORQ6R327 1708 aa24.01■■□□□ 1.43
NPAS3-202ENST00000356141 MADDQ8WXG6 1647 aa24■■□□□ 1.43
NPAS3-202ENST00000356141 ABCC3O15438 1527 aa24■■□□□ 1.43
NPAS3-202ENST00000356141 STAG3Q9UJ98 1225 aa24■■□□□ 1.43
NPAS3-202ENST00000356141 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
NPAS3-202ENST00000356141 POLR1AO95602 1720 aaPredicted RBP23.99■■□□□ 1.43
NPAS3-202ENST00000356141 SIGLEC1Q9BZZ2 1709 aa23.93■■□□□ 1.42
NPAS3-202ENST00000356141 KIF1BO60333 1816 aa23.93■■□□□ 1.42
NPAS3-202ENST00000356141 PER1O15534 1290 aaPredicted RBP23.92■■□□□ 1.42
NPAS3-202ENST00000356141 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
NPAS3-202ENST00000356141 CAMSAP1Q5T5Y3 1602 aa23.88■■□□□ 1.41
NPAS3-202ENST00000356141 KTN1Q86UP2 1357 aaKnown RBP23.88■■□□□ 1.41
NPAS3-202ENST00000356141 TNNT2P45379 298 aaPredicted RBP23.88■■□□□ 1.41
NPAS3-202ENST00000356141 ESF1Q9H501 851 aaKnown RBP23.88■■□□□ 1.41
NPAS3-202ENST00000356141 GLI2P10070 1586 aa23.87■■□□□ 1.41
NPAS3-202ENST00000356141 KNSTRNQ9Y448 316 aa23.87■■□□□ 1.41
NPAS3-202ENST00000356141 LMTK2Q8IWU2 1503 aa23.86■■□□□ 1.41
NPAS3-202ENST00000356141 NEFLP07196 543 aa23.86■■□□□ 1.41
NPAS3-202ENST00000356141 PNISRQ8TF01 805 aaKnown RBP23.85■■□□□ 1.41
NPAS3-202ENST00000356141 MYBBP1AQ9BQG0 1328 aaKnown RBP23.85■■□□□ 1.41
NPAS3-202ENST00000356141 SYNMO15061 1565 aa23.84■■□□□ 1.41
NPAS3-202ENST00000356141 CEBPAP49715 358 aaPredicted RBP23.83■■□□□ 1.41
NPAS3-202ENST00000356141 ADGRB3O60242 1522 aa23.81■■□□□ 1.4
NPAS3-202ENST00000356141 CENPJQ9HC77 1338 aaPredicted RBP23.81■■□□□ 1.4
NPAS3-202ENST00000356141 SLC12A5Q9H2X9 1139 aa23.81■■□□□ 1.4
NPAS3-202ENST00000356141 C14orf93Q9H972 538 aaKnown RBP23.81■■□□□ 1.4
NPAS3-202ENST00000356141 RALBP1Q15311 655 aa23.8■■□□□ 1.4
NPAS3-202ENST00000356141 EIF3AQ14152 1382 aaKnown RBP23.8■■□□□ 1.4
NPAS3-202ENST00000356141 VGFO15240 615 aaPredicted RBP23.79■■□□□ 1.4
NPAS3-202ENST00000356141 KIF13AQ9H1H9 1805 aa23.79■■□□□ 1.4
NPAS3-202ENST00000356141 CABP2Q9NPB3 220 aa23.79■■□□□ 1.4
NPAS3-202ENST00000356141 IQGAP1P46940 1657 aa23.77■■□□□ 1.4
NPAS3-202ENST00000356141 MINK1Q8N4C8 1332 aaPredicted RBP23.77■■□□□ 1.4
NPAS3-202ENST00000356141 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
NPAS3-202ENST00000356141 CARD14Q9BXL6 1004 aa23.75■■□□□ 1.39
NPAS3-202ENST00000356141 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
NPAS3-202ENST00000356141 MYOM2P54296 1465 aa23.75■■□□□ 1.39
NPAS3-202ENST00000356141 MYO5BQ9ULV0 1848 aa23.75■■□□□ 1.39
NPAS3-202ENST00000356141 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
NPAS3-202ENST00000356141 STAC3Q96MF2 364 aa23.74■■□□□ 1.39
NPAS3-202ENST00000356141 LAMC1P11047 1609 aa23.73■■□□□ 1.39
NPAS3-202ENST00000356141 ZBED9Q6R2W3 1325 aa23.73■■□□□ 1.39
NPAS3-202ENST00000356141 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
NPAS3-202ENST00000356141 CDCA8Q53HL2 280 aa23.72■■□□□ 1.39
NPAS3-202ENST00000356141 CLTCQ00610 1675 aaKnown RBP23.72■■□□□ 1.39
NPAS3-202ENST00000356141 ERVK-7P63135 1459 aa23.71■■□□□ 1.39
NPAS3-202ENST00000356141 AMER1Q5JTC6 1135 aaPredicted RBP23.71■■□□□ 1.39
NPAS3-202ENST00000356141 PRAM1Q96QH2 718 aa23.7■■□□□ 1.38
NPAS3-202ENST00000356141 POGKQ9P215 609 aa23.7■■□□□ 1.38
NPAS3-202ENST00000356141 SRPK2P78362 688 aaKnown RBP23.69■■□□□ 1.38
NPAS3-202ENST00000356141 IFT172Q9UG01 1749 aa23.69■■□□□ 1.38
NPAS3-202ENST00000356141 PPLO60437 1756 aa23.69■■□□□ 1.38
NPAS3-202ENST00000356141 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
NPAS3-202ENST00000356141 PIK3C2BO00750 1634 aa23.68■■□□□ 1.38
NPAS3-202ENST00000356141 ZMYM4Q5VZL5 1548 aa23.68■■□□□ 1.38
NPAS3-202ENST00000356141 PPP2R1AP30153 589 aa23.68■■□□□ 1.38
NPAS3-202ENST00000356141 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
NPAS3-202ENST00000356141 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
NPAS3-202ENST00000356141 RPGRIP1LQ68CZ1 1315 aa23.67■■□□□ 1.38
NPAS3-202ENST00000356141 PREX1Q8TCU6 1659 aa23.67■■□□□ 1.38
NPAS3-202ENST00000356141 NEXMIFQ5QGS0 1516 aa23.66■■□□□ 1.38
NPAS3-202ENST00000356141 ADAMTS8Q9UP79 889 aa23.65■■□□□ 1.38
NPAS3-202ENST00000356141 ZMYM3Q14202 1370 aa23.65■■□□□ 1.38
NPAS3-202ENST00000356141 CDCA7LQ96GN5 454 aa23.65■■□□□ 1.38
NPAS3-202ENST00000356141 NRXN1Q9ULB1 1477 aa23.65■■□□□ 1.38
NPAS3-202ENST00000356141 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
NPAS3-202ENST00000356141 ADGRB1O14514 1584 aa23.61■■□□□ 1.37
NPAS3-202ENST00000356141 NUTM2FA1L443 756 aa23.61■■□□□ 1.37
NPAS3-202ENST00000356141 WDR43Q15061 677 aaKnown RBP eCLIP23.59■■□□□ 1.37
NPAS3-202ENST00000356141 TXNDC2Q86VQ3 553 aa23.58■■□□□ 1.36
NPAS3-202ENST00000356141 NSD3Q9BZ95 1437 aa23.58■■□□□ 1.36
NPAS3-202ENST00000356141 KDM5AP29375 1690 aaKnown RBP23.57■■□□□ 1.36
NPAS3-202ENST00000356141 TMEM131LA2VDJ0 1609 aa23.57■■□□□ 1.36
NPAS3-202ENST00000356141 MYOM1P52179 1685 aa23.56■■□□□ 1.36
NPAS3-202ENST00000356141 KIAA1210Q9ULL0 1709 aa23.56■■□□□ 1.36
NPAS3-202ENST00000356141 ZC3H13Q5T200 1668 aaKnown RBP23.56■■□□□ 1.36
NPAS3-202ENST00000356141 EVC2Q86UK5 1308 aa23.55■■□□□ 1.36
NPAS3-202ENST00000356141 MORC1Q86VD1 984 aa23.55■■□□□ 1.36
NPAS3-202ENST00000356141 QRICH2Q9H0J4 1663 aa23.55■■□□□ 1.36
NPAS3-202ENST00000356141 PLEKHG5O94827 1062 aa23.55■■□□□ 1.36
NPAS3-202ENST00000356141 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
NPAS3-202ENST00000356141 NCKAP5LQ9HCH0 1330 aa23.54■■□□□ 1.36
NPAS3-202ENST00000356141 ARHGEF40Q8TER5 1519 aa23.54■■□□□ 1.36
NPAS3-202ENST00000356141 PLEKHH1Q9ULM0 1364 aa23.54■■□□□ 1.36
NPAS3-202ENST00000356141 EIF5BO60841 1220 aaKnown RBP23.54■■□□□ 1.36
NPAS3-202ENST00000356141 FBLN1P23142 703 aa23.54■■□□□ 1.36
NPAS3-202ENST00000356141 B4GALNT3Q6L9W6 998 aa23.53■■□□□ 1.36
NPAS3-202ENST00000356141 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
NPAS3-202ENST00000356141 RIMS2Q9UQ26 1411 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms