RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CANXP27824 592 aaKnown RBP9.71□□□□□ -0.86
CCR9-201ENST00000355983 GTF2E1P29083 439 aaPredicted RBP9.71□□□□□ -0.86
CCR9-201ENST00000355983 CLEC17AQ6ZS10 378 aa9.71□□□□□ -0.86
CCR9-201ENST00000355983 IPO4Q8TEX9 1081 aaKnown RBP9.71□□□□□ -0.86
CCR9-201ENST00000355983 SHROOM2Q13796 1616 aa9.71□□□□□ -0.86
CCR9-201ENST00000355983 ABCC2Q92887 1545 aa9.71□□□□□ -0.86
CCR9-201ENST00000355983 STAC3Q96MF2 364 aa9.7□□□□□ -0.86
CCR9-201ENST00000355983 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 GZF1Q9H116 711 aaPredicted RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 CNGB1Q14028 1251 aaPredicted RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 BBXQ8WY36 941 aaPredicted RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
CCR9-201ENST00000355983 ABCA10Q8WWZ4 1543 aa9.7□□□□□ -0.86
CCR9-201ENST00000355983 NKTRP30414 1462 aaKnown RBP9.7□□□□□ -0.86
CCR9-201ENST00000355983 SASS6Q6UVJ0 657 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 FAM13BQ9NYF5 915 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 GOLGA2Q08379 1002 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 GAS2L3Q86XJ1 694 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 SNX21Q969T3 373 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 UQCRHLA0A096LP55 91 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 UQCRHP07919 91 aa9.69□□□□□ -0.86
CCR9-201ENST00000355983 COL17A1Q9UMD9 1497 aaPredicted RBP9.68□□□□□ -0.86
CCR9-201ENST00000355983 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
CCR9-201ENST00000355983 SLFN5Q08AF3 891 aa9.68□□□□□ -0.86
CCR9-201ENST00000355983 SMC5Q8IY18 1101 aa9.68□□□□□ -0.86
CCR9-201ENST00000355983 PMFBP1Q8TBY8 1022 aa9.68□□□□□ -0.86
CCR9-201ENST00000355983 SLC4A1APQ9BWU0 796 aaKnown RBP9.68□□□□□ -0.86
CCR9-201ENST00000355983 ADGRL2O95490 1459 aa9.68□□□□□ -0.86
CCR9-201ENST00000355983 NASPP49321 788 aaPredicted RBP9.68□□□□□ -0.86
CCR9-201ENST00000355983 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
CCR9-201ENST00000355983 NESP48681 1621 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 KDM5DQ9BY66 1539 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 IGHDP01880 384 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 PPP4R3BQ5MIZ7 849 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 NAP1L2Q9ULW6 460 aaPredicted RBP9.67□□□□□ -0.86
CCR9-201ENST00000355983 PLEKHH1Q9ULM0 1364 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 ABCC5O15440 1437 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 TRPM1Q7Z4N2 1603 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 FOXD1Q16676 465 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 CLUAP1Q96AJ1 413 aa9.67□□□□□ -0.86
CCR9-201ENST00000355983 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
CCR9-201ENST00000355983 ZNF445P59923 1031 aa9.66□□□□□ -0.86
CCR9-201ENST00000355983 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
CCR9-201ENST00000355983 R3HCC1Q9Y3T6 440 aaKnown RBP9.66□□□□□ -0.86
CCR9-201ENST00000355983 ARXQ96QS3 562 aa9.66□□□□□ -0.86
CCR9-201ENST00000355983 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
CCR9-201ENST00000355983 CHIC2Q9UKJ5 165 aa9.66□□□□□ -0.86
CCR9-201ENST00000355983 GPRASP1Q5JY77 1395 aa9.65□□□□□ -0.86
CCR9-201ENST00000355983 GTF2F1P35269 517 aaKnown RBP eCLIP9.65□□□□□ -0.86
CCR9-201ENST00000355983 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
CCR9-201ENST00000355983 ITSN2Q9NZM3 1697 aa9.65□□□□□ -0.87
CCR9-201ENST00000355983 HSCBQ8IWL3 235 aa9.65□□□□□ -0.87
CCR9-201ENST00000355983 POLR3GLQ9BT43 218 aa9.65□□□□□ -0.87
CCR9-201ENST00000355983 ZKSCAN5Q9Y2L8 839 aa9.65□□□□□ -0.87
CCR9-201ENST00000355983 POLA1P09884 1462 aaPredicted RBP9.65□□□□□ -0.87
CCR9-201ENST00000355983 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
CCR9-201ENST00000355983 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
CCR9-201ENST00000355983 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
CCR9-201ENST00000355983 PIK3C2GO75747 1445 aa9.64□□□□□ -0.87
CCR9-201ENST00000355983 ZHX1Q9UKY1 873 aaPredicted RBP9.64□□□□□ -0.87
CCR9-201ENST00000355983 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
CCR9-201ENST00000355983 ST20-MTHFSA0A0A6YYL1 179 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 KLHL34Q8N239 644 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 TNPO1Q92973 898 aaKnown RBP9.63□□□□□ -0.87
CCR9-201ENST00000355983 C22orf23Q9BZE7 217 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 TMEM51Q9NW97 253 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 KIAA0586Q9BVV6 1533 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 MYRIPQ8NFW9 859 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
CCR9-201ENST00000355983 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.63□□□□□ -0.87
CCR9-201ENST00000355983 PRDM15P57071 1507 aaPredicted RBP9.63□□□□□ -0.87
CCR9-201ENST00000355983 KCNA4P22459 653 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 YEATS2Q9ULM3 1422 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 E9PSI1 815 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 SLC20A2Q08357 652 aa9.62□□□□□ -0.87
CCR9-201ENST00000355983 HMGN5P82970 282 aaKnown RBP9.61□□□□□ -0.87
CCR9-201ENST00000355983 CCDC39Q9UFE4 941 aa9.61□□□□□ -0.87
CCR9-201ENST00000355983 ABCC10Q5T3U5 1492 aa9.61□□□□□ -0.87
CCR9-201ENST00000355983 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
CCR9-201ENST00000355983 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
CCR9-201ENST00000355983 DNMBPQ6XZF7 1577 aa9.6□□□□□ -0.87
CCR9-201ENST00000355983 EIF2AK4Q9P2K8 1649 aaKnown RBP9.6□□□□□ -0.87
CCR9-201ENST00000355983 FAM135AQ9P2D6 1515 aa9.6□□□□□ -0.87
CCR9-201ENST00000355983 RWDD1Q9H446 243 aaPredicted RBP9.59□□□□□ -0.87
CCR9-201ENST00000355983 WDR62O43379 1518 aa9.59□□□□□ -0.87
CCR9-201ENST00000355983 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
CCR9-201ENST00000355983 PTPRGP23470 1445 aa9.58□□□□□ -0.88
CCR9-201ENST00000355983 PDZRN3Q9UPQ7 1066 aa9.58□□□□□ -0.88
CCR9-201ENST00000355983 PRAG1Q86YV5 1406 aa9.58□□□□□ -0.88
CCR9-201ENST00000355983 WDR43Q15061 677 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCR9-201ENST00000355983 UHRF1BP1LA0JNW5 1464 aa9.58□□□□□ -0.88
CCR9-201ENST00000355983 PRDM10Q9NQV6 1147 aa9.57□□□□□ -0.88
CCR9-201ENST00000355983 NUP160Q12769 1436 aa9.57□□□□□ -0.88
CCR9-201ENST00000355983 SYNMO15061 1565 aa9.57□□□□□ -0.88
CCR9-201ENST00000355983 XPCQ01831 940 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms