RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 NRXN1Q9ULB1 1477 aa35.5■■■■□ 3.27
CLK2-201ENST00000355560 TESK2Q96S53 571 aa35.48■■■■□ 3.27
CLK2-201ENST00000355560 PRKRIP1Q9H875 184 aaPredicted RBP35.47■■■■□ 3.27
CLK2-201ENST00000355560 SCAF11Q99590 1463 aaKnown RBP35.47■■■■□ 3.27
CLK2-201ENST00000355560 PPP6R1Q9UPN7 881 aa35.44■■■■□ 3.26
CLK2-201ENST00000355560 SCAF1Q9H7N4 1312 aaKnown RBP35.44■■■■□ 3.26
CLK2-201ENST00000355560 CLTCQ00610 1675 aaKnown RBP35.42■■■■□ 3.26
CLK2-201ENST00000355560 CFAP70Q5T0N1 1121 aa35.42■■■■□ 3.26
CLK2-201ENST00000355560 DISP3Q9P2K9 1392 aa35.41■■■■□ 3.26
CLK2-201ENST00000355560 RPGRIP1LQ68CZ1 1315 aa35.41■■■■□ 3.26
CLK2-201ENST00000355560 SLC52A1Q9NWF4 448 aa35.39■■■■□ 3.26
CLK2-201ENST00000355560 IDI1Q13907 227 aa35.39■■■■□ 3.26
CLK2-201ENST00000355560 PIK3C2GO75747 1445 aa35.37■■■■□ 3.25
CLK2-201ENST00000355560 ERVK-7P63135 1459 aa35.37■■■■□ 3.25
CLK2-201ENST00000355560 TMF1P82094 1093 aa35.36■■■■□ 3.25
CLK2-201ENST00000355560 MLECQ14165 292 aa35.36■■■■□ 3.25
CLK2-201ENST00000355560 EIF3AQ14152 1382 aaKnown RBP35.36■■■■□ 3.25
CLK2-201ENST00000355560 NEXMIFQ5QGS0 1516 aa35.35■■■■□ 3.25
CLK2-201ENST00000355560 FBXO31Q5XUX0 539 aaPredicted RBP35.33■■■■□ 3.25
CLK2-201ENST00000355560 SETBP1Q9Y6X0 1596 aa35.31■■■■□ 3.24
CLK2-201ENST00000355560 MYO5BQ9ULV0 1848 aa35.3■■■■□ 3.24
CLK2-201ENST00000355560 TMEM131LA2VDJ0 1609 aa35.3■■■■□ 3.24
CLK2-201ENST00000355560 GTF3C3Q9Y5Q9 886 aa35.26■■■■□ 3.23
CLK2-201ENST00000355560 CCDC184Q52MB2 194 aa35.24■■■■□ 3.23
CLK2-201ENST00000355560 C14orf93Q9H972 538 aaKnown RBP35.24■■■■□ 3.23
CLK2-201ENST00000355560 SPATA31D1Q6ZQQ2 1576 aa35.24■■■■□ 3.23
CLK2-201ENST00000355560 VGFO15240 615 aaPredicted RBP35.24■■■■□ 3.23
CLK2-201ENST00000355560 CNGB1Q14028 1251 aaPredicted RBP35.23■■■■□ 3.23
CLK2-201ENST00000355560 NUTM2DQ5VT03 806 aaPredicted RBP35.23■■■■□ 3.23
CLK2-201ENST00000355560 ADGRB1O14514 1584 aa35.21■■■■□ 3.23
CLK2-201ENST00000355560 MRS2Q9HD23 443 aa35.2■■■■□ 3.22
CLK2-201ENST00000355560 TRHP20396 242 aaPredicted RBP35.19■■■■□ 3.22
CLK2-201ENST00000355560 MYO3AQ8NEV4 1616 aa35.19■■■■□ 3.22
CLK2-201ENST00000355560 ESF1Q9H501 851 aaKnown RBP35.19■■■■□ 3.22
CLK2-201ENST00000355560 ZFYVE9O95405 1425 aa35.18■■■■□ 3.22
CLK2-201ENST00000355560 CDCA8Q53HL2 280 aa35.15■■■■□ 3.22
CLK2-201ENST00000355560 ZMYM3Q14202 1370 aa35.13■■■■□ 3.21
CLK2-201ENST00000355560 STAG3Q9UJ98 1225 aa35.12■■■■□ 3.21
CLK2-201ENST00000355560 TMEM132EQ6IEE7 984 aa35.11■■■■□ 3.21
CLK2-201ENST00000355560 KDM5AP29375 1690 aaKnown RBP35.1■■■■□ 3.21
CLK2-201ENST00000355560 KTN1Q86UP2 1357 aaKnown RBP35.1■■■■□ 3.21
CLK2-201ENST00000355560 PER1O15534 1290 aaPredicted RBP35.1■■■■□ 3.21
CLK2-201ENST00000355560 SLC24A1O60721 1099 aa35.09■■■■□ 3.21
CLK2-201ENST00000355560 PANK3Q9H999 370 aa35.09■■■■□ 3.21
CLK2-201ENST00000355560 TRAK1Q9UPV9 953 aa35.09■■■■□ 3.21
CLK2-201ENST00000355560 SBNO2Q9Y2G9 1366 aa35.08■■■■□ 3.21
CLK2-201ENST00000355560 CENPJQ9HC77 1338 aaPredicted RBP35.07■■■■□ 3.2
CLK2-201ENST00000355560 MYOM1P52179 1685 aa35.05■■■■□ 3.2
CLK2-201ENST00000355560 RALBP1Q15311 655 aa35.05■■■■□ 3.2
CLK2-201ENST00000355560 A2ML1A8K2U0 1454 aa35.05■■■■□ 3.2
CLK2-201ENST00000355560 QRICH2Q9H0J4 1663 aa35.04■■■■□ 3.2
CLK2-201ENST00000355560 FAM9BQ8IZU0 186 aa35.03■■■■□ 3.2
CLK2-201ENST00000355560 HNRNPUQ00839 825 aaKnown RBP eCLIP35.02■■■■□ 3.2
CLK2-201ENST00000355560 PARD3Q8TEW0 1356 aa35■■■■□ 3.19
CLK2-201ENST00000355560 MYBBP1AQ9BQG0 1328 aaKnown RBP35■■■■□ 3.19
CLK2-201ENST00000355560 ARHGEF28Q8N1W1 1705 aaKnown RBP35■■■■□ 3.19
CLK2-201ENST00000355560 ASXL1Q8IXJ9 1541 aa34.99■■■■□ 3.19
CLK2-201ENST00000355560 SENP3Q9H4L4 574 aaPredicted RBP34.98■■■■□ 3.19
CLK2-201ENST00000355560 TNRQ92752 1358 aa34.93■■■■□ 3.18
CLK2-201ENST00000355560 RIMS2Q9UQ26 1411 aa34.93■■■■□ 3.18
CLK2-201ENST00000355560 CC2D1BQ5T0F9 858 aaKnown RBP34.93■■■■□ 3.18
CLK2-201ENST00000355560 ALKQ9UM73 1620 aa34.91■■■■□ 3.18
CLK2-201ENST00000355560 BRD4O60885 1362 aaPredicted RBP34.91■■■■□ 3.18
CLK2-201ENST00000355560 TMC1Q8TDI8 760 aa34.91■■■■□ 3.18
CLK2-201ENST00000355560 KNSTRNQ9Y448 316 aa34.88■■■■□ 3.17
CLK2-201ENST00000355560 NLRP13Q86W25 1043 aa34.85■■■■□ 3.17
CLK2-201ENST00000355560 STK26Q9P289 416 aa34.84■■■■□ 3.17
CLK2-201ENST00000355560 YTHDC2Q9H6S0 1430 aaKnown RBP34.84■■■■□ 3.17
CLK2-201ENST00000355560 FER1L4A9Z1Z3 1794 aa34.83■■■■□ 3.17
CLK2-201ENST00000355560 DNAJC5Q9H3Z4 198 aa34.83■■■■□ 3.17
CLK2-201ENST00000355560 PNISRQ8TF01 805 aaKnown RBP34.82■■■■□ 3.16
CLK2-201ENST00000355560 UBR1Q8IWV7 1749 aa34.81■■■■□ 3.16
CLK2-201ENST00000355560 PTPRMP28827 1452 aa34.8■■■■□ 3.16
CLK2-201ENST00000355560 AMER1Q5JTC6 1135 aaPredicted RBP34.79■■■■□ 3.16
CLK2-201ENST00000355560 C3P01024 1663 aa34.79■■■■□ 3.16
CLK2-201ENST00000355560 TULP4Q9NRJ4 1543 aa34.79■■■■□ 3.16
CLK2-201ENST00000355560 SETD1AO15047 1707 aaKnown RBP34.79■■■■□ 3.16
CLK2-201ENST00000355560 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.78■■■■□ 3.16
CLK2-201ENST00000355560 CEBPAP49715 358 aaPredicted RBP34.76■■■■□ 3.16
CLK2-201ENST00000355560 EVC2Q86UK5 1308 aa34.76■■■■□ 3.16
CLK2-201ENST00000355560 NRXN3Q9Y4C0 1643 aa34.75■■■■□ 3.15
CLK2-201ENST00000355560 SAFB2Q14151 953 aaKnown RBP eCLIP34.75■■■■□ 3.15
CLK2-201ENST00000355560 NLRP1Q9C000 1473 aa34.74■■■■□ 3.15
CLK2-201ENST00000355560 ZBED9Q6R2W3 1325 aa34.73■■■■□ 3.15
CLK2-201ENST00000355560 NPC1L1Q9UHC9 1359 aa34.73■■■■□ 3.15
CLK2-201ENST00000355560 LRPPRCP42704 1394 aaKnown RBP34.72■■■■□ 3.15
CLK2-201ENST00000355560 TMEM2Q9UHN6 1383 aa34.71■■■■□ 3.15
CLK2-201ENST00000355560 PRAM1Q96QH2 718 aa34.71■■■■□ 3.15
CLK2-201ENST00000355560 HDGFP51858 240 aaKnown RBP34.7■■■■□ 3.15
CLK2-201ENST00000355560 PUS7Q96PZ0 661 aaKnown RBP34.69■■■■□ 3.14
CLK2-201ENST00000355560 CARD14Q9BXL6 1004 aa34.69■■■■□ 3.14
CLK2-201ENST00000355560 POGKQ9P215 609 aa34.68■■■■□ 3.14
CLK2-201ENST00000355560 SLC12A5Q9H2X9 1139 aa34.66■■■■□ 3.14
CLK2-201ENST00000355560 DLC1Q96QB1 1528 aa34.65■■■■□ 3.14
CLK2-201ENST00000355560 PLPPR3Q6T4P5 718 aa34.64■■■■□ 3.14
CLK2-201ENST00000355560 CABP2Q9NPB3 220 aa34.63■■■■□ 3.13
CLK2-201ENST00000355560 MINK1Q8N4C8 1332 aaPredicted RBP34.62■■■■□ 3.13
CLK2-201ENST00000355560 PPP2R1AP30153 589 aa34.61■■■■□ 3.13
CLK2-201ENST00000355560 NSD3Q9BZ95 1437 aa34.6■■■■□ 3.13
CLK2-201ENST00000355560 METP08581 1390 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms