RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ST20-MTHFSA0A0A6YYL1 179 aa31.83■■■□□ 2.69
SCAMP3-202ENST00000355379 SPATA31D1Q6ZQQ2 1576 aa31.82■■■□□ 2.68
SCAMP3-202ENST00000355379 CHGAP10645 457 aaKnown RBP31.8■■■□□ 2.68
SCAMP3-202ENST00000355379 TMEM131LA2VDJ0 1609 aa31.8■■■□□ 2.68
SCAMP3-202ENST00000355379 ANP32CO43423 234 aa31.79■■■□□ 2.68
SCAMP3-202ENST00000355379 IDI1Q13907 227 aa31.78■■■□□ 2.68
SCAMP3-202ENST00000355379 ADGRF5Q8IZF2 1346 aa31.77■■■□□ 2.68
SCAMP3-202ENST00000355379 NEXMIFQ5QGS0 1516 aa31.77■■■□□ 2.68
SCAMP3-202ENST00000355379 MYO5BQ9ULV0 1848 aa31.76■■■□□ 2.67
SCAMP3-202ENST00000355379 SCAF11Q99590 1463 aaKnown RBP31.76■■■□□ 2.67
SCAMP3-202ENST00000355379 MLECQ14165 292 aa31.75■■■□□ 2.67
SCAMP3-202ENST00000355379 SETBP1Q9Y6X0 1596 aa31.74■■■□□ 2.67
SCAMP3-202ENST00000355379 PIK3C2GO75747 1445 aa31.73■■■□□ 2.67
SCAMP3-202ENST00000355379 FBXO31Q5XUX0 539 aaPredicted RBP31.72■■■□□ 2.67
SCAMP3-202ENST00000355379 ZFYVE9O95405 1425 aa31.71■■■□□ 2.67
SCAMP3-202ENST00000355379 ESF1Q9H501 851 aaKnown RBP31.7■■■□□ 2.67
SCAMP3-202ENST00000355379 CCER2I3L3R5 266 aa31.7■■■□□ 2.66
SCAMP3-202ENST00000355379 ZMYM3Q14202 1370 aa31.68■■■□□ 2.66
SCAMP3-202ENST00000355379 TESK2Q96S53 571 aa31.67■■■□□ 2.66
SCAMP3-202ENST00000355379 VGFO15240 615 aaPredicted RBP31.66■■■□□ 2.66
SCAMP3-202ENST00000355379 CFAP70Q5T0N1 1121 aa31.66■■■□□ 2.66
SCAMP3-202ENST00000355379 EIF3AQ14152 1382 aaKnown RBP31.65■■■□□ 2.66
SCAMP3-202ENST00000355379 C14orf93Q9H972 538 aaKnown RBP31.64■■■□□ 2.66
SCAMP3-202ENST00000355379 MYO3AQ8NEV4 1616 aa31.61■■■□□ 2.65
SCAMP3-202ENST00000355379 ADGRB1O14514 1584 aa31.59■■■□□ 2.65
SCAMP3-202ENST00000355379 TMF1P82094 1093 aa31.59■■■□□ 2.65
SCAMP3-202ENST00000355379 CENPBP07199 599 aaPredicted RBP31.57■■■□□ 2.64
SCAMP3-202ENST00000355379 KDM5AP29375 1690 aaKnown RBP31.57■■■□□ 2.64
SCAMP3-202ENST00000355379 A2ML1A8K2U0 1454 aa31.55■■■□□ 2.64
SCAMP3-202ENST00000355379 SLC24A1O60721 1099 aa31.55■■■□□ 2.64
SCAMP3-202ENST00000355379 POLR3GLQ9BT43 218 aa31.55■■■□□ 2.64
SCAMP3-202ENST00000355379 DISP3Q9P2K9 1392 aa31.55■■■□□ 2.64
SCAMP3-202ENST00000355379 FER1L4A9Z1Z3 1794 aa31.54■■■□□ 2.64
SCAMP3-202ENST00000355379 STAG3Q9UJ98 1225 aa31.51■■■□□ 2.63
SCAMP3-202ENST00000355379 TNRQ92752 1358 aa31.51■■■□□ 2.63
SCAMP3-202ENST00000355379 YTHDC1Q96MU7 727 aaKnown RBP31.5■■■□□ 2.63
SCAMP3-202ENST00000355379 PRKRIP1Q9H875 184 aaPredicted RBP31.48■■■□□ 2.63
SCAMP3-202ENST00000355379 C3P01024 1663 aa31.48■■■□□ 2.63
SCAMP3-202ENST00000355379 SBNO2Q9Y2G9 1366 aa31.48■■■□□ 2.63
SCAMP3-202ENST00000355379 CDCA8Q53HL2 280 aa31.47■■■□□ 2.63
SCAMP3-202ENST00000355379 NUTM2DQ5VT03 806 aaPredicted RBP31.44■■■□□ 2.62
SCAMP3-202ENST00000355379 RIMS2Q9UQ26 1411 aa31.43■■■□□ 2.62
SCAMP3-202ENST00000355379 UBR1Q8IWV7 1749 aa31.42■■■□□ 2.62
SCAMP3-202ENST00000355379 QRICH2Q9H0J4 1663 aa31.41■■■□□ 2.62
SCAMP3-202ENST00000355379 ARHGEF28Q8N1W1 1705 aaKnown RBP31.41■■■□□ 2.62
SCAMP3-202ENST00000355379 NLRP1Q9C000 1473 aa31.41■■■□□ 2.62
SCAMP3-202ENST00000355379 ASXL1Q8IXJ9 1541 aa31.39■■■□□ 2.62
SCAMP3-202ENST00000355379 ALKQ9UM73 1620 aa31.39■■■□□ 2.62
SCAMP3-202ENST00000355379 CENPJQ9HC77 1338 aaPredicted RBP31.38■■■□□ 2.61
SCAMP3-202ENST00000355379 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.38■■■□□ 2.61
SCAMP3-202ENST00000355379 TMEM132EQ6IEE7 984 aa31.37■■■□□ 2.61
SCAMP3-202ENST00000355379 KTN1Q86UP2 1357 aaKnown RBP31.35■■■□□ 2.61
SCAMP3-202ENST00000355379 TRAK1Q9UPV9 953 aa31.34■■■□□ 2.61
SCAMP3-202ENST00000355379 SETD1AO15047 1707 aaKnown RBP31.34■■■□□ 2.61
SCAMP3-202ENST00000355379 MYOM1P52179 1685 aa31.34■■■□□ 2.61
SCAMP3-202ENST00000355379 HDGFP51858 240 aaKnown RBP31.33■■■□□ 2.61
SCAMP3-202ENST00000355379 PER1O15534 1290 aaPredicted RBP31.29■■■□□ 2.6
SCAMP3-202ENST00000355379 NRXN3Q9Y4C0 1643 aa31.28■■■□□ 2.6
SCAMP3-202ENST00000355379 CEBPAP49715 358 aaPredicted RBP31.27■■■□□ 2.6
SCAMP3-202ENST00000355379 YTHDC2Q9H6S0 1430 aaKnown RBP31.27■■■□□ 2.6
SCAMP3-202ENST00000355379 PANK3Q9H999 370 aa31.26■■■□□ 2.59
SCAMP3-202ENST00000355379 TMEM2Q9UHN6 1383 aa31.26■■■□□ 2.59
SCAMP3-202ENST00000355379 ADAMTSL3P82987 1691 aa31.25■■■□□ 2.59
SCAMP3-202ENST00000355379 RALBP1Q15311 655 aa31.24■■■□□ 2.59
SCAMP3-202ENST00000355379 RIMS1Q86UR5 1692 aaKnown RBP31.24■■■□□ 2.59
SCAMP3-202ENST00000355379 PTPRMP28827 1452 aa31.24■■■□□ 2.59
SCAMP3-202ENST00000355379 PUS7Q96PZ0 661 aaKnown RBP31.22■■■□□ 2.59
SCAMP3-202ENST00000355379 DLC1Q96QB1 1528 aa31.22■■■□□ 2.59
SCAMP3-202ENST00000355379 SLIT1O75093 1534 aa31.18■■■□□ 2.58
SCAMP3-202ENST00000355379 LRPPRCP42704 1394 aaKnown RBP31.17■■■□□ 2.58
SCAMP3-202ENST00000355379 PARD3Q8TEW0 1356 aa31.17■■■□□ 2.58
SCAMP3-202ENST00000355379 ARHGAP23Q9P227 1491 aa31.16■■■□□ 2.58
SCAMP3-202ENST00000355379 CCDC184Q52MB2 194 aa31.16■■■□□ 2.58
SCAMP3-202ENST00000355379 MRS2Q9HD23 443 aa31.16■■■□□ 2.58
SCAMP3-202ENST00000355379 KNDC1Q76NI1 1749 aa31.15■■■□□ 2.58
SCAMP3-202ENST00000355379 TULP4Q9NRJ4 1543 aa31.15■■■□□ 2.58
SCAMP3-202ENST00000355379 MYBBP1AQ9BQG0 1328 aaKnown RBP31.14■■■□□ 2.58
SCAMP3-202ENST00000355379 STK26Q9P289 416 aa31.14■■■□□ 2.57
SCAMP3-202ENST00000355379 EVC2Q86UK5 1308 aa31.13■■■□□ 2.57
SCAMP3-202ENST00000355379 ABCC11Q96J66 1382 aa31.12■■■□□ 2.57
SCAMP3-202ENST00000355379 PLEKHG1Q9ULL1 1385 aa31.12■■■□□ 2.57
SCAMP3-202ENST00000355379 NPC1L1Q9UHC9 1359 aa31.1■■■□□ 2.57
SCAMP3-202ENST00000355379 SENP3Q9H4L4 574 aaPredicted RBP31.09■■■□□ 2.57
SCAMP3-202ENST00000355379 BRD4O60885 1362 aaPredicted RBP31.09■■■□□ 2.57
SCAMP3-202ENST00000355379 KNSTRNQ9Y448 316 aa31.08■■■□□ 2.57
SCAMP3-202ENST00000355379 THEMISQ8N1K5 641 aaPredicted RBP31.08■■■□□ 2.57
SCAMP3-202ENST00000355379 CEP170BQ9Y4F5 1589 aaPredicted RBP31.07■■■□□ 2.56
SCAMP3-202ENST00000355379 PRAM1Q96QH2 718 aa31.07■■■□□ 2.56
SCAMP3-202ENST00000355379 POGKQ9P215 609 aa31.06■■■□□ 2.56
SCAMP3-202ENST00000355379 EID1Q9Y6B2 187 aa31.06■■■□□ 2.56
SCAMP3-202ENST00000355379 CNGB1Q14028 1251 aaPredicted RBP31.05■■■□□ 2.56
SCAMP3-202ENST00000355379 SIRT1Q96EB6 747 aa31.05■■■□□ 2.56
SCAMP3-202ENST00000355379 ZNF142P52746 1687 aaPredicted RBP31.05■■■□□ 2.56
SCAMP3-202ENST00000355379 TECPR2O15040 1411 aa31.04■■■□□ 2.56
SCAMP3-202ENST00000355379 ADAMTS13Q76LX8 1427 aa31.04■■■□□ 2.56
SCAMP3-202ENST00000355379 METP08581 1390 aa31.04■■■□□ 2.56
SCAMP3-202ENST00000355379 LTKP29376 864 aa31.03■■■□□ 2.56
SCAMP3-202ENST00000355379 TXNDC2Q86VQ3 553 aa31.03■■■□□ 2.56
SCAMP3-202ENST00000355379 AMER1Q5JTC6 1135 aaPredicted RBP31.03■■■□□ 2.56
SCAMP3-202ENST00000355379 MED14O60244 1454 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms