RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NEXMIFQ5QGS0 1516 aa24.07■■□□□ 1.44
VPS13B-201ENST00000355155 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
VPS13B-201ENST00000355155 ZNF326Q5BKZ1 582 aaKnown RBP24.04■■□□□ 1.44
VPS13B-201ENST00000355155 PIK3C2GO75747 1445 aa24.04■■□□□ 1.44
VPS13B-201ENST00000355155 SLC52A1Q9NWF4 448 aa24.03■■□□□ 1.44
VPS13B-201ENST00000355155 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
VPS13B-201ENST00000355155 NBPF1Q3BBV0 1214 aa24.02■■□□□ 1.43
VPS13B-201ENST00000355155 CFAP65Q6ZU64 1925 aaKnown RBP24■■□□□ 1.43
VPS13B-201ENST00000355155 ANP32CO43423 234 aa23.99■■□□□ 1.43
VPS13B-201ENST00000355155 ST20-MTHFSA0A0A6YYL1 179 aa23.98■■□□□ 1.43
VPS13B-201ENST00000355155 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
VPS13B-201ENST00000355155 TESK2Q96S53 571 aa23.97■■□□□ 1.43
VPS13B-201ENST00000355155 MYO5BQ9ULV0 1848 aa23.97■■□□□ 1.43
VPS13B-201ENST00000355155 CENPBP07199 599 aaPredicted RBP23.93■■□□□ 1.42
VPS13B-201ENST00000355155 SBNO2Q9Y2G9 1366 aa23.93■■□□□ 1.42
VPS13B-201ENST00000355155 ADGRF5Q8IZF2 1346 aa23.92■■□□□ 1.42
VPS13B-201ENST00000355155 EIF3AQ14152 1382 aaKnown RBP23.91■■□□□ 1.42
VPS13B-201ENST00000355155 SLC24A1O60721 1099 aa23.89■■□□□ 1.41
VPS13B-201ENST00000355155 C14orf93Q9H972 538 aaKnown RBP23.88■■□□□ 1.41
VPS13B-201ENST00000355155 IDI1Q13907 227 aa23.88■■□□□ 1.41
VPS13B-201ENST00000355155 KTN1Q86UP2 1357 aaKnown RBP23.87■■□□□ 1.41
VPS13B-201ENST00000355155 MYOM1P52179 1685 aa23.84■■□□□ 1.41
VPS13B-201ENST00000355155 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
VPS13B-201ENST00000355155 A2ML1A8K2U0 1454 aa23.84■■□□□ 1.41
VPS13B-201ENST00000355155 PRKRIP1Q9H875 184 aaPredicted RBP23.83■■□□□ 1.41
VPS13B-201ENST00000355155 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
VPS13B-201ENST00000355155 VGFO15240 615 aaPredicted RBP23.83■■□□□ 1.4
VPS13B-201ENST00000355155 SETD1AO15047 1707 aaKnown RBP23.82■■□□□ 1.4
VPS13B-201ENST00000355155 DNAJC5Q9H3Z4 198 aa23.82■■□□□ 1.4
VPS13B-201ENST00000355155 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
VPS13B-201ENST00000355155 TMF1P82094 1093 aa23.81■■□□□ 1.4
VPS13B-201ENST00000355155 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
VPS13B-201ENST00000355155 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
VPS13B-201ENST00000355155 QRICH2Q9H0J4 1663 aa23.79■■□□□ 1.4
VPS13B-201ENST00000355155 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.4
VPS13B-201ENST00000355155 FBXO31Q5XUX0 539 aaPredicted RBP23.76■■□□□ 1.39
VPS13B-201ENST00000355155 FER1L4A9Z1Z3 1794 aa23.76■■□□□ 1.39
VPS13B-201ENST00000355155 CDCA8Q53HL2 280 aa23.75■■□□□ 1.39
VPS13B-201ENST00000355155 C3P01024 1663 aa23.75■■□□□ 1.39
VPS13B-201ENST00000355155 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
VPS13B-201ENST00000355155 NLRP1Q9C000 1473 aa23.73■■□□□ 1.39
VPS13B-201ENST00000355155 NRXN3Q9Y4C0 1643 aa23.72■■□□□ 1.39
VPS13B-201ENST00000355155 DLC1Q96QB1 1528 aa23.72■■□□□ 1.39
VPS13B-201ENST00000355155 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
VPS13B-201ENST00000355155 PUS7Q96PZ0 661 aaKnown RBP23.72■■□□□ 1.39
VPS13B-201ENST00000355155 CHGAP10645 457 aaKnown RBP23.7■■□□□ 1.39
VPS13B-201ENST00000355155 TNRQ92752 1358 aa23.7■■□□□ 1.38
VPS13B-201ENST00000355155 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
VPS13B-201ENST00000355155 PARD3Q8TEW0 1356 aa23.68■■□□□ 1.38
VPS13B-201ENST00000355155 RIMS2Q9UQ26 1411 aa23.68■■□□□ 1.38
VPS13B-201ENST00000355155 NPC1L1Q9UHC9 1359 aa23.67■■□□□ 1.38
VPS13B-201ENST00000355155 RALBP1Q15311 655 aa23.66■■□□□ 1.38
VPS13B-201ENST00000355155 PTPRMP28827 1452 aa23.65■■□□□ 1.38
VPS13B-201ENST00000355155 YTHDC1Q96MU7 727 aaKnown RBP23.65■■□□□ 1.38
VPS13B-201ENST00000355155 CENPJQ9HC77 1338 aaPredicted RBP23.64■■□□□ 1.38
VPS13B-201ENST00000355155 USP32Q8NFA0 1604 aa23.64■■□□□ 1.37
VPS13B-201ENST00000355155 ESF1Q9H501 851 aaKnown RBP23.62■■□□□ 1.37
VPS13B-201ENST00000355155 SLIT1O75093 1534 aa23.62■■□□□ 1.37
VPS13B-201ENST00000355155 ADAMTSL3P82987 1691 aa23.62■■□□□ 1.37
VPS13B-201ENST00000355155 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
VPS13B-201ENST00000355155 ARHGAP23Q9P227 1491 aa23.6■■□□□ 1.37
VPS13B-201ENST00000355155 TULP4Q9NRJ4 1543 aa23.6■■□□□ 1.37
VPS13B-201ENST00000355155 MLECQ14165 292 aa23.6■■□□□ 1.37
VPS13B-201ENST00000355155 BRD4O60885 1362 aaPredicted RBP23.6■■□□□ 1.37
VPS13B-201ENST00000355155 YTHDC2Q9H6S0 1430 aaKnown RBP23.6■■□□□ 1.37
VPS13B-201ENST00000355155 INSRP06213 1382 aa23.58■■□□□ 1.37
VPS13B-201ENST00000355155 TRHP20396 242 aaPredicted RBP23.57■■□□□ 1.36
VPS13B-201ENST00000355155 MYBBP1AQ9BQG0 1328 aaKnown RBP23.57■■□□□ 1.36
VPS13B-201ENST00000355155 TECPR2O15040 1411 aa23.56■■□□□ 1.36
VPS13B-201ENST00000355155 TMEM2Q9UHN6 1383 aa23.56■■□□□ 1.36
VPS13B-201ENST00000355155 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
VPS13B-201ENST00000355155 PANK3Q9H999 370 aa23.55■■□□□ 1.36
VPS13B-201ENST00000355155 ZNF142P52746 1687 aaPredicted RBP23.54■■□□□ 1.36
VPS13B-201ENST00000355155 CPS1P31327 1500 aa23.54■■□□□ 1.36
VPS13B-201ENST00000355155 MED14O60244 1454 aa23.53■■□□□ 1.36
VPS13B-201ENST00000355155 HDGFP51858 240 aaKnown RBP23.53■■□□□ 1.36
VPS13B-201ENST00000355155 CCDC184Q52MB2 194 aa23.53■■□□□ 1.36
VPS13B-201ENST00000355155 ABCC11Q96J66 1382 aa23.52■■□□□ 1.36
VPS13B-201ENST00000355155 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
VPS13B-201ENST00000355155 NINLQ9Y2I6 1382 aa23.52■■□□□ 1.36
VPS13B-201ENST00000355155 SIRT1Q96EB6 747 aa23.52■■□□□ 1.36
VPS13B-201ENST00000355155 DIP2AQ14689 1571 aa23.51■■□□□ 1.35
VPS13B-201ENST00000355155 TMEM132EQ6IEE7 984 aa23.51■■□□□ 1.35
VPS13B-201ENST00000355155 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
VPS13B-201ENST00000355155 PLEKHG1Q9ULL1 1385 aa23.49■■□□□ 1.35
VPS13B-201ENST00000355155 STAG3Q9UJ98 1225 aa23.49■■□□□ 1.35
VPS13B-201ENST00000355155 AMER1Q5JTC6 1135 aaPredicted RBP23.48■■□□□ 1.35
VPS13B-201ENST00000355155 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
VPS13B-201ENST00000355155 MRS2Q9HD23 443 aa23.48■■□□□ 1.35
VPS13B-201ENST00000355155 RIMS1Q86UR5 1692 aaKnown RBP23.47■■□□□ 1.35
VPS13B-201ENST00000355155 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
VPS13B-201ENST00000355155 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.35
VPS13B-201ENST00000355155 EVC2Q86UK5 1308 aa23.45■■□□□ 1.34
VPS13B-201ENST00000355155 NLRP13Q86W25 1043 aa23.45■■□□□ 1.34
VPS13B-201ENST00000355155 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
VPS13B-201ENST00000355155 ADGRB2O60241 1585 aa23.44■■□□□ 1.34
VPS13B-201ENST00000355155 PNISRQ8TF01 805 aaKnown RBP23.44■■□□□ 1.34
VPS13B-201ENST00000355155 CEP170BQ9Y4F5 1589 aaPredicted RBP23.43■■□□□ 1.34
VPS13B-201ENST00000355155 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.34
VPS13B-201ENST00000355155 ATAD2Q6PL18 1390 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms