RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 ABCC3O15438 1527 aa14.72□□□□□ -0.05
SND1-201ENST00000354725 IGSF3O75054 1194 aa14.72□□□□□ -0.05
SND1-201ENST00000354725 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
SND1-201ENST00000354725 ANP32CO43423 234 aa14.71□□□□□ -0.05
SND1-201ENST00000354725 CNTLNQ9NXG0 1405 aa14.71□□□□□ -0.06
SND1-201ENST00000354725 WASHC2AQ641Q2 1341 aa14.7□□□□□ -0.06
SND1-201ENST00000354725 TSPY4P0CV99 314 aa14.7□□□□□ -0.06
SND1-201ENST00000354725 TSPY10P0CW01 314 aa14.7□□□□□ -0.06
SND1-201ENST00000354725 TMEM132AQ24JP5 1023 aa14.7□□□□□ -0.06
SND1-201ENST00000354725 TET3O43151 1660 aa14.69□□□□□ -0.06
SND1-201ENST00000354725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.69□□□□□ -0.064e-7■■■■■ 43.3
SND1-201ENST00000354725 ANKRD50Q9ULJ7 1429 aa14.68□□□□□ -0.06
SND1-201ENST00000354725 ANKRD30BQ9BXX2 1392 aa14.68□□□□□ -0.06
SND1-201ENST00000354725 E9PCH4 1651 aa14.68□□□□□ -0.06
SND1-201ENST00000354725 EFCAB6Q5THR3 1501 aa14.67□□□□□ -0.06
SND1-201ENST00000354725 HIRIP3Q9BW71 556 aaPredicted RBP14.66□□□□□ -0.06
SND1-201ENST00000354725 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
SND1-201ENST00000354725 PTPRMP28827 1452 aa14.65□□□□□ -0.06
SND1-201ENST00000354725 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
SND1-201ENST00000354725 ZNF142P52746 1687 aaPredicted RBP14.65□□□□□ -0.06
SND1-201ENST00000354725 PZPP20742 1482 aa14.64□□□□□ -0.07
SND1-201ENST00000354725 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
SND1-201ENST00000354725 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
SND1-201ENST00000354725 CHIC2Q9UKJ5 165 aa14.64□□□□□ -0.07
SND1-201ENST00000354725 ARHGAP31Q2M1Z3 1444 aa14.64□□□□□ -0.07
SND1-201ENST00000354725 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
SND1-201ENST00000354725 RTL5Q5HYW3 569 aaPredicted RBP14.62□□□□□ -0.07
SND1-201ENST00000354725 SYNMO15061 1565 aa14.61□□□□□ -0.07
SND1-201ENST00000354725 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
SND1-201ENST00000354725 CCDC7Q96M83 1385 aa14.61□□□□□ -0.07
SND1-201ENST00000354725 HSPA5P11021 654 aaKnown RBP14.61□□□□□ -0.07
SND1-201ENST00000354725 PRDM10Q9NQV6 1147 aa14.61□□□□□ -0.07
SND1-201ENST00000354725 NOP58Q9Y2X3 529 aaKnown RBP14.61□□□□□ -0.07
SND1-201ENST00000354725 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
SND1-201ENST00000354725 MYO3AQ8NEV4 1616 aa14.6□□□□□ -0.07
SND1-201ENST00000354725 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
SND1-201ENST00000354725 TRIM52Q96A61 297 aa14.6□□□□□ -0.07
SND1-201ENST00000354725 MPHOSPH9Q99550 1183 aa14.59□□□□□ -0.07
SND1-201ENST00000354725 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
SND1-201ENST00000354725 FBXO3Q9UK99 471 aa14.58□□□□□ -0.07
SND1-201ENST00000354725 PLCB2Q00722 1185 aa14.58□□□□□ -0.08
SND1-201ENST00000354725 NPATQ14207 1427 aa14.57□□□□□ -0.08
SND1-201ENST00000354725 KIF3BO15066 747 aa14.56□□□□□ -0.08
SND1-201ENST00000354725 NOS1P29475 1434 aa14.56□□□□□ -0.08
SND1-201ENST00000354725 ZMYM3Q14202 1370 aa14.55□□□□□ -0.08
SND1-201ENST00000354725 ERVK-7P63135 1459 aa14.55□□□□□ -0.08
SND1-201ENST00000354725 PTPRTO14522 1441 aa14.54□□□□□ -0.08
SND1-201ENST00000354725 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
SND1-201ENST00000354725 CHMP4BQ9H444 224 aaKnown RBP14.54□□□□□ -0.08
SND1-201ENST00000354725 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
SND1-201ENST00000354725 UBR1Q8IWV7 1749 aa14.54□□□□□ -0.08
SND1-201ENST00000354725 EIF4G2P78344 907 aaKnown RBP eCLIP14.53□□□□□ -0.083e-7■■■■■ 29.8
SND1-201ENST00000354725 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
SND1-201ENST00000354725 PLA2R1Q13018 1463 aa14.53□□□□□ -0.08
SND1-201ENST00000354725 NBPF8Q3BBV2 869 aa14.52□□□□□ -0.09
SND1-201ENST00000354725 PRKRIP1Q9H875 184 aaPredicted RBP14.52□□□□□ -0.09
SND1-201ENST00000354725 TRPM2O94759 1503 aa14.51□□□□□ -0.09
SND1-201ENST00000354725 BRPF3Q9ULD4 1205 aa14.51□□□□□ -0.09
SND1-201ENST00000354725 MYO5BQ9ULV0 1848 aa14.51□□□□□ -0.09
SND1-201ENST00000354725 SETD1BQ9UPS6 1966 aaKnown RBP14.51□□□□□ -0.09
SND1-201ENST00000354725 LMTK3Q96Q04 1460 aa14.51□□□□□ -0.09
SND1-201ENST00000354725 ZBED9Q6R2W3 1325 aa14.5□□□□□ -0.09
SND1-201ENST00000354725 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
SND1-201ENST00000354725 NEURL4Q96JN8 1562 aa14.5□□□□□ -0.09
SND1-201ENST00000354725 CCDC184Q52MB2 194 aa14.5□□□□□ -0.09
SND1-201ENST00000354725 CLTCL1P53675 1640 aa14.49□□□□□ -0.09
SND1-201ENST00000354725 ARID4BQ4LE39 1312 aaPredicted RBP14.49□□□□□ -0.09
SND1-201ENST00000354725 TMEM131LA2VDJ0 1609 aa14.49□□□□□ -0.09
SND1-201ENST00000354725 CFAP65Q6ZU64 1925 aaKnown RBP14.49□□□□□ -0.09
SND1-201ENST00000354725 RALGAPBQ86X10 1494 aa14.48□□□□□ -0.09
SND1-201ENST00000354725 STRCQ7RTU9 1775 aa14.48□□□□□ -0.09
SND1-201ENST00000354725 CEP170BQ9Y4F5 1589 aaPredicted RBP14.48□□□□□ -0.09
SND1-201ENST00000354725 GGT6Q6P531 493 aa14.48□□□□□ -0.09
SND1-201ENST00000354725 KIF7Q2M1P5 1343 aa14.48□□□□□ -0.09
SND1-201ENST00000354725 IFT172Q9UG01 1749 aa14.47□□□□□ -0.09
SND1-201ENST00000354725 WASHC2CQ9Y4E1 1318 aa14.47□□□□□ -0.09
SND1-201ENST00000354725 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
SND1-201ENST00000354725 MLECQ14165 292 aa14.46□□□□□ -0.09
SND1-201ENST00000354725 ZNF326Q5BKZ1 582 aaKnown RBP14.46□□□□□ -0.09
SND1-201ENST00000354725 LAMC1P11047 1609 aa14.45□□□□□ -0.1
SND1-201ENST00000354725 NUP155O75694 1391 aa14.45□□□□□ -0.1
SND1-201ENST00000354725 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.15e-6■□□□□ 10.1
SND1-201ENST00000354725 ARID3AQ99856 593 aa14.45□□□□□ -0.1
SND1-201ENST00000354725 UGGT1Q9NYU2 1555 aa14.45□□□□□ -0.1
SND1-201ENST00000354725 KANK1Q14678 1352 aa14.45□□□□□ -0.1
SND1-201ENST00000354725 HSP90B1P14625 803 aaKnown RBP14.45□□□□□ -0.1
SND1-201ENST00000354725 ZNF526Q8TF50 670 aaPredicted RBP14.44□□□□□ -0.1
SND1-201ENST00000354725 SMG6Q86US8 1419 aaKnown RBP14.44□□□□□ -0.1
SND1-201ENST00000354725 NLRP1Q9C000 1473 aa14.44□□□□□ -0.1
SND1-201ENST00000354725 ADGRB3O60242 1522 aa14.43□□□□□ -0.1
SND1-201ENST00000354725 A2ML1A8K2U0 1454 aa14.43□□□□□ -0.1
SND1-201ENST00000354725 CEBPAP49715 358 aaPredicted RBP14.43□□□□□ -0.1
SND1-201ENST00000354725 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
SND1-201ENST00000354725 TRPM1Q7Z4N2 1603 aa14.42□□□□□ -0.1
SND1-201ENST00000354725 SLIT1O75093 1534 aa14.41□□□□□ -0.1
SND1-201ENST00000354725 KIF1BO60333 1816 aa14.41□□□□□ -0.1
SND1-201ENST00000354725 FBXO31Q5XUX0 539 aaPredicted RBP14.41□□□□□ -0.1
SND1-201ENST00000354725 FOXD1Q16676 465 aa14.41□□□□□ -0.1
SND1-201ENST00000354725 CNPY4Q8N129 248 aa14.41□□□□□ -0.1
SND1-201ENST00000354725 ARHGAP23Q9P227 1491 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms