RNA–Protein interactions for RNA: ENST00000354480.2

RBM3-201, Transcript of RNA binding motif protein 3, humanhuman

TSL 2 BASIC

Gene RBM3, Length 1,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3-201ENST00000354480 MROH2AA6NES4 1674 aa17.53■□□□□ 0.4
RBM3-201ENST00000354480 SCAF11Q99590 1463 aaKnown RBP17.52■□□□□ 0.4
RBM3-201ENST00000354480 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
RBM3-201ENST00000354480 SLC24A1O60721 1099 aa17.52■□□□□ 0.39
RBM3-201ENST00000354480 IDI1Q13907 227 aa17.52■□□□□ 0.39
RBM3-201ENST00000354480 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.39
RBM3-201ENST00000354480 EIF3AQ14152 1382 aaKnown RBP17.52■□□□□ 0.39
RBM3-201ENST00000354480 PREX1Q8TCU6 1659 aa17.51■□□□□ 0.39
RBM3-201ENST00000354480 VGFO15240 615 aaPredicted RBP17.51■□□□□ 0.39
RBM3-201ENST00000354480 ERVK-7P63135 1459 aa17.5■□□□□ 0.39
RBM3-201ENST00000354480 POLR3GLQ9BT43 218 aa17.5■□□□□ 0.39
RBM3-201ENST00000354480 TMF1P82094 1093 aa17.5■□□□□ 0.39
RBM3-201ENST00000354480 MLECQ14165 292 aa17.5■□□□□ 0.39
RBM3-201ENST00000354480 CFAP70Q5T0N1 1121 aa17.48■□□□□ 0.39
RBM3-201ENST00000354480 TESK2Q96S53 571 aa17.48■□□□□ 0.39
RBM3-201ENST00000354480 CLTCQ00610 1675 aaKnown RBP17.47■□□□□ 0.39
RBM3-201ENST00000354480 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
RBM3-201ENST00000354480 PPLO60437 1756 aa17.47■□□□□ 0.39
RBM3-201ENST00000354480 IQGAP1P46940 1657 aa17.46■□□□□ 0.39
RBM3-201ENST00000354480 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
RBM3-201ENST00000354480 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
RBM3-201ENST00000354480 C14orf93Q9H972 538 aaKnown RBP17.46■□□□□ 0.39
RBM3-201ENST00000354480 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
RBM3-201ENST00000354480 PIK3C2GO75747 1445 aa17.46■□□□□ 0.38
RBM3-201ENST00000354480 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
RBM3-201ENST00000354480 SETBP1Q9Y6X0 1596 aa17.45■□□□□ 0.38
RBM3-201ENST00000354480 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
RBM3-201ENST00000354480 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
RBM3-201ENST00000354480 ZMYM3Q14202 1370 aa17.43■□□□□ 0.38
RBM3-201ENST00000354480 NEXMIFQ5QGS0 1516 aa17.43■□□□□ 0.38
RBM3-201ENST00000354480 TMEM131LA2VDJ0 1609 aa17.42■□□□□ 0.38
RBM3-201ENST00000354480 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
RBM3-201ENST00000354480 KTN1Q86UP2 1357 aaKnown RBP17.38■□□□□ 0.37
RBM3-201ENST00000354480 SBNO2Q9Y2G9 1366 aa17.36■□□□□ 0.37
RBM3-201ENST00000354480 TNRQ92752 1358 aa17.35■□□□□ 0.37
RBM3-201ENST00000354480 ADGRB1O14514 1584 aa17.35■□□□□ 0.37
RBM3-201ENST00000354480 HDGFP51858 240 aaKnown RBP17.35■□□□□ 0.37
RBM3-201ENST00000354480 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
RBM3-201ENST00000354480 A2ML1A8K2U0 1454 aa17.35■□□□□ 0.37
RBM3-201ENST00000354480 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
RBM3-201ENST00000354480 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.37
RBM3-201ENST00000354480 MYO3AQ8NEV4 1616 aa17.33■□□□□ 0.36
RBM3-201ENST00000354480 RALBP1Q15311 655 aa17.33■□□□□ 0.36
RBM3-201ENST00000354480 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
RBM3-201ENST00000354480 RIMS2Q9UQ26 1411 aa17.31■□□□□ 0.36
RBM3-201ENST00000354480 TMEM132EQ6IEE7 984 aa17.31■□□□□ 0.36
RBM3-201ENST00000354480 PANK3Q9H999 370 aa17.3■□□□□ 0.36
RBM3-201ENST00000354480 MYO5BQ9ULV0 1848 aa17.29■□□□□ 0.36
RBM3-201ENST00000354480 MRS2Q9HD23 443 aa17.29■□□□□ 0.36
RBM3-201ENST00000354480 PER1O15534 1290 aaPredicted RBP17.29■□□□□ 0.36
RBM3-201ENST00000354480 KDM5AP29375 1690 aaKnown RBP17.27■□□□□ 0.36
RBM3-201ENST00000354480 PUS7Q96PZ0 661 aaKnown RBP17.27■□□□□ 0.36
RBM3-201ENST00000354480 NLRP1Q9C000 1473 aa17.27■□□□□ 0.36
RBM3-201ENST00000354480 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
RBM3-201ENST00000354480 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
RBM3-201ENST00000354480 KNSTRNQ9Y448 316 aa17.24■□□□□ 0.35
RBM3-201ENST00000354480 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
RBM3-201ENST00000354480 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
RBM3-201ENST00000354480 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
RBM3-201ENST00000354480 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
RBM3-201ENST00000354480 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
RBM3-201ENST00000354480 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
RBM3-201ENST00000354480 TMEM2Q9UHN6 1383 aa17.21■□□□□ 0.35
RBM3-201ENST00000354480 CNGB1Q14028 1251 aaPredicted RBP17.21■□□□□ 0.35
RBM3-201ENST00000354480 FER1L4A9Z1Z3 1794 aa17.21■□□□□ 0.35
RBM3-201ENST00000354480 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
RBM3-201ENST00000354480 STK26Q9P289 416 aa17.2■□□□□ 0.34
RBM3-201ENST00000354480 ASXL1Q8IXJ9 1541 aa17.2■□□□□ 0.34
RBM3-201ENST00000354480 CEBPAP49715 358 aaPredicted RBP17.2■□□□□ 0.34
RBM3-201ENST00000354480 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
RBM3-201ENST00000354480 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
RBM3-201ENST00000354480 POGKQ9P215 609 aa17.19■□□□□ 0.34
RBM3-201ENST00000354480 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
RBM3-201ENST00000354480 C3P01024 1663 aa17.18■□□□□ 0.34
RBM3-201ENST00000354480 LRPPRCP42704 1394 aaKnown RBP17.18■□□□□ 0.34
RBM3-201ENST00000354480 UBR1Q8IWV7 1749 aa17.18■□□□□ 0.34
RBM3-201ENST00000354480 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
RBM3-201ENST00000354480 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
RBM3-201ENST00000354480 PTPRMP28827 1452 aa17.16■□□□□ 0.34
RBM3-201ENST00000354480 HNRNPUQ00839 825 aaKnown RBP eCLIP17.16■□□□□ 0.34
RBM3-201ENST00000354480 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
RBM3-201ENST00000354480 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
RBM3-201ENST00000354480 MYOM1P52179 1685 aa17.16■□□□□ 0.34
RBM3-201ENST00000354480 ABCC11Q96J66 1382 aa17.16■□□□□ 0.34
RBM3-201ENST00000354480 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
RBM3-201ENST00000354480 PRAM1Q96QH2 718 aa17.16■□□□□ 0.34
RBM3-201ENST00000354480 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
RBM3-201ENST00000354480 AMER1Q5JTC6 1135 aaPredicted RBP17.14■□□□□ 0.33
RBM3-201ENST00000354480 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
RBM3-201ENST00000354480 BCANQ96GW7 911 aa17.14■□□□□ 0.33
RBM3-201ENST00000354480 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
RBM3-201ENST00000354480 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.33
RBM3-201ENST00000354480 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
RBM3-201ENST00000354480 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
RBM3-201ENST00000354480 PNISRQ8TF01 805 aaKnown RBP17.13■□□□□ 0.33
RBM3-201ENST00000354480 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
RBM3-201ENST00000354480 SLIT1O75093 1534 aa17.11■□□□□ 0.33
RBM3-201ENST00000354480 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
RBM3-201ENST00000354480 ATAD2Q6PL18 1390 aa17.11■□□□□ 0.33
RBM3-201ENST00000354480 NRXN3Q9Y4C0 1643 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms