RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CARNS1A5YM72 827 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 PBX2P40425 430 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 MAP3K9P80192 1104 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 MINK1Q8N4C8 1332 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-202ENST00000354071 EMP3P54852 163 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 FAM163AQ96GL9 167 aaPredicted RBP2.92□□□□□ -1.94
BRCA1-202ENST00000354071 DDRGK1Q96HY6 314 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 POLR3EQ9NVU0 708 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 PDIA4P13667 645 aaKnown RBP2.92□□□□□ -1.94
BRCA1-202ENST00000354071 ZNF454Q8N9F8 522 aa2.92□□□□□ -1.94
BRCA1-202ENST00000354071 RABGEF1Q9UJ41 708 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 MDM2Q00987 491 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-202ENST00000354071 MMRN1Q13201 1228 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 HIC1Q14526 733 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 AEBP1Q8IUX7 1158 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 FNBP4Q8N3X1 1017 aaPredicted RBP2.91□□□□□ -1.94
BRCA1-202ENST00000354071 TMEM134Q9H6X4 195 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 SNRKQ9NRH2 765 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 IGSF5Q9NSI5 407 aa2.91□□□□□ -1.94
BRCA1-202ENST00000354071 IRF5Q13568 498 aa2.9□□□□□ -1.95
BRCA1-202ENST00000354071 PSDA5PKW4 1024 aaPredicted RBP2.9□□□□□ -1.95
BRCA1-202ENST00000354071 RETREG2Q8NC44 543 aa2.9□□□□□ -1.95
BRCA1-202ENST00000354071 FOXD4L5Q5VV16 416 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-202ENST00000354071 KCTD17Q8N5Z5 321 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 FOXD4L4Q8WXT5 416 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-202ENST00000354071 THAP11Q96EK4 314 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 PROSER2Q86WR7 435 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-202ENST00000354071 FLIIQ13045 1269 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 PPP4R3BQ5MIZ7 849 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 RBM33Q96EV2 1170 aaKnown RBP2.89□□□□□ -1.95
BRCA1-202ENST00000354071 KCNK17Q96T54 332 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 FAM217BQ9NTX9 383 aaPredicted RBP2.89□□□□□ -1.95
BRCA1-202ENST00000354071 KIAA1468Q9P260 1216 aa2.89□□□□□ -1.95
BRCA1-202ENST00000354071 A6NJR5 290 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 BEGAINQ9BUH8 593 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 ATP1B4Q9UN42 357 aaPredicted RBP2.88□□□□□ -1.95
BRCA1-202ENST00000354071 POM121CA8CG34 1229 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 FCHSD2O94868 740 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 CD46P15529 392 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 COG6Q9Y2V7 657 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 ZBTB7CA1YPR0 619 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 TBC1D12O60347 775 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 TATDN2Q93075 761 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.88□□□□□ -1.95
BRCA1-202ENST00000354071 MTMR7Q9Y216 660 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 ERBB3P21860 1342 aa2.88□□□□□ -1.95
BRCA1-202ENST00000354071 PCMTD1Q96MG8 357 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-202ENST00000354071 LOC105371045A0A1W2PR82 267 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 PTPREP23469 700 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 SSTR3P32745 418 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-202ENST00000354071 ILDR2Q71H61 639 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 CERKQ8TCT0 537 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 RIMBP2O15034 1052 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 RAD21O60216 631 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 NUDT18Q6ZVK8 323 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 GDPD2Q9HCC8 539 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 PLSCR2Q9NRY7 297 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 SPATA31D1Q6ZQQ2 1576 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 SOWAHBA6NEL2 793 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 ITGBL1O95965 494 aaPredicted RBP2.87□□□□□ -1.95
BRCA1-202ENST00000354071 SH3D19Q5HYK7 790 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 MYSM1Q5VVJ2 828 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 GOPCQ9HD26 462 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 LIMD1Q9UGP4 676 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 PCDHGC3Q9UN70 934 aa2.87□□□□□ -1.95
BRCA1-202ENST00000354071 CCDC9Q9Y3X0 531 aaKnown RBP2.87□□□□□ -1.95
BRCA1-202ENST00000354071 LCE2BO14633 110 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 SMAPO00193 183 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 LAPTM4BQ86VI4 370 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 RCCD1A6NED2 376 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 APLP1P51693 650 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 CSPP1Q1MSJ5 1256 aa2.86□□□□□ -1.95
BRCA1-202ENST00000354071 MAP3K7O43318 606 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 IFFO2Q5TF58 517 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 MTMR14Q8NCE2 650 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 HLA-CQ95604 372 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 IGSF3O75054 1194 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 TJAP1Q5JTD0 557 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 THSD4Q6ZMP0 1018 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 ZNF710Q8N1W2 664 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 RGS22Q8NE09 1264 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 ZFRQ96KR1 1074 aaKnown RBP2.85□□□□□ -1.95
BRCA1-202ENST00000354071 GZF1Q9H116 711 aaPredicted RBP2.85□□□□□ -1.95
BRCA1-202ENST00000354071 GPCPD1Q9NPB8 672 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 QPCTQ16769 361 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 SKIV2LQ15477 1246 aaKnown RBP2.85□□□□□ -1.95
BRCA1-202ENST00000354071 ADAMTS19Q8TE59 1207 aa2.85□□□□□ -1.95
BRCA1-202ENST00000354071 RFC5P40937 340 aa2.84□□□□□ -1.95
BRCA1-202ENST00000354071 FAM98CQ17RN3 349 aaKnown RBP2.84□□□□□ -1.95
BRCA1-202ENST00000354071 TBC1D2BQ9UPU7 963 aa2.84□□□□□ -1.95
BRCA1-202ENST00000354071 ZNF330Q9Y3S2 320 aaPredicted RBP2.84□□□□□ -1.95
BRCA1-202ENST00000354071 OCSTAMPQ9BR26 566 aa2.84□□□□□ -1.95
BRCA1-202ENST00000354071 KRTAP17-1Q9BYP8 105 aa2.84□□□□□ -1.95
BRCA1-202ENST00000354071 SEPT9Q9UHD8 586 aaPredicted RBP2.84□□□□□ -1.95
BRCA1-202ENST00000354071 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.84□□□□□ -1.96
BRCA1-202ENST00000354071 RFX1P22670 979 aa2.84□□□□□ -1.96
BRCA1-202ENST00000354071 CCDC97Q96F63 343 aaPredicted RBP2.84□□□□□ -1.96
BRCA1-202ENST00000354071 ABL2P42684 1182 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 TUSC1Q2TAM9 212 aa2.83□□□□□ -1.96
BRCA1-202ENST00000354071 TBC1D2Q9BYX2 928 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms