RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.24
PKP1-202ENST00000352845 ST20-MTHFSA0A0A6YYL1 179 aa13.52□□□□□ -0.25
PKP1-202ENST00000352845 PARD3Q8TEW0 1356 aa13.51□□□□□ -0.25
PKP1-202ENST00000352845 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
PKP1-202ENST00000352845 CANXP27824 592 aaKnown RBP13.51□□□□□ -0.25
PKP1-202ENST00000352845 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
PKP1-202ENST00000352845 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
PKP1-202ENST00000352845 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
PKP1-202ENST00000352845 SKAP1Q86WV1 359 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 ANKRD50Q9ULJ7 1429 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 TRAK2O60296 914 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 RIPK4P57078 832 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 DMTNQ08495 405 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 USP19O94966 1318 aa13.49□□□□□ -0.25
PKP1-202ENST00000352845 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
PKP1-202ENST00000352845 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 KDM5DQ9BY66 1539 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 NLRP13Q86W25 1043 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 ARXQ96QS3 562 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 SLKQ9H2G2 1235 aaPredicted RBP13.48□□□□□ -0.25
PKP1-202ENST00000352845 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
PKP1-202ENST00000352845 ANKRD30AQ9BXX3 1397 aa13.48□□□□□ -0.25
PKP1-202ENST00000352845 GTF2E1P29083 439 aaPredicted RBP13.47□□□□□ -0.25
PKP1-202ENST00000352845 ZSCAN30Q86W11 494 aa13.47□□□□□ -0.25
PKP1-202ENST00000352845 TTC37Q6PGP7 1564 aa13.47□□□□□ -0.25
PKP1-202ENST00000352845 CCDC144AA2RUR9 1427 aa13.47□□□□□ -0.25
PKP1-202ENST00000352845 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
PKP1-202ENST00000352845 ZCCHC11Q5TAX3 1644 aaKnown RBP13.47□□□□□ -0.25
PKP1-202ENST00000352845 PER1O15534 1290 aaPredicted RBP13.46□□□□□ -0.25
PKP1-202ENST00000352845 PLIN1O60240 522 aa13.46□□□□□ -0.25
PKP1-202ENST00000352845 IPO4Q8TEX9 1081 aaKnown RBP13.46□□□□□ -0.25
PKP1-202ENST00000352845 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
PKP1-202ENST00000352845 PREX2Q70Z35 1606 aa13.46□□□□□ -0.26
PKP1-202ENST00000352845 CCDC173Q0VFZ6 552 aa13.45□□□□□ -0.26
PKP1-202ENST00000352845 DYNC1I1O14576 645 aa13.45□□□□□ -0.26
PKP1-202ENST00000352845 KIF20AO95235 890 aa13.45□□□□□ -0.26
PKP1-202ENST00000352845 STAC3Q96MF2 364 aa13.45□□□□□ -0.26
PKP1-202ENST00000352845 NUP155O75694 1391 aa13.45□□□□□ -0.26
PKP1-202ENST00000352845 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
PKP1-202ENST00000352845 UHRF1BP1LA0JNW5 1464 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 PTMSP20962 102 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.44□□□□□ -0.26
PKP1-202ENST00000352845 GZF1Q9H116 711 aaPredicted RBP13.44□□□□□ -0.26
PKP1-202ENST00000352845 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
PKP1-202ENST00000352845 FAM13BQ9NYF5 915 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 CHMP5Q9NZZ3 219 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 KDM2AQ9Y2K7 1162 aa13.44□□□□□ -0.26
PKP1-202ENST00000352845 MAPK8IP3Q9UPT6 1336 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 PPP1R9BQ96SB3 815 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 SAMD9LQ8IVG5 1584 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 SHANK2Q9UPX8 1470 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 MSNP26038 577 aaKnown RBP13.43□□□□□ -0.26
PKP1-202ENST00000352845 HS1BP3Q53T59 392 aa13.43□□□□□ -0.26
PKP1-202ENST00000352845 GTPBP4Q9BZE4 634 aaKnown RBP13.43□□□□□ -0.26
PKP1-202ENST00000352845 TAF3Q5VWG9 929 aa13.41□□□□□ -0.26
PKP1-202ENST00000352845 ANP32BQ92688 251 aaKnown RBP13.41□□□□□ -0.26
PKP1-202ENST00000352845 ZHX1Q9UKY1 873 aaPredicted RBP13.41□□□□□ -0.26
PKP1-202ENST00000352845 NLRP1Q9C000 1473 aa13.41□□□□□ -0.26
PKP1-202ENST00000352845 C9orf84Q5VXU9 1444 aa13.41□□□□□ -0.26
PKP1-202ENST00000352845 HNRNPMP52272 730 aaKnown RBP eCLIP13.4□□□□□ -0.26
PKP1-202ENST00000352845 PRAG1Q86YV5 1406 aa13.4□□□□□ -0.26
PKP1-202ENST00000352845 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
PKP1-202ENST00000352845 EIF3AQ14152 1382 aaKnown RBP13.4□□□□□ -0.26
PKP1-202ENST00000352845 SKOR2Q2VWA4 1001 aaPredicted RBP13.4□□□□□ -0.26
PKP1-202ENST00000352845 C20orf194Q5TEA3 1177 aa13.4□□□□□ -0.26
PKP1-202ENST00000352845 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
PKP1-202ENST00000352845 MYO5CQ9NQX4 1742 aa13.4□□□□□ -0.26
PKP1-202ENST00000352845 COL17A1Q9UMD9 1497 aaPredicted RBP13.39□□□□□ -0.27
PKP1-202ENST00000352845 LETM1O95202 739 aaPredicted RBP13.39□□□□□ -0.27
PKP1-202ENST00000352845 ARHGAP5Q13017 1502 aa13.39□□□□□ -0.27
PKP1-202ENST00000352845 CSPP1Q1MSJ5 1256 aa13.39□□□□□ -0.27
PKP1-202ENST00000352845 PPP4R3BQ5MIZ7 849 aa13.39□□□□□ -0.27
PKP1-202ENST00000352845 TBC1D2Q9BYX2 928 aa13.39□□□□□ -0.27
PKP1-202ENST00000352845 ARHGEF5Q12774 1597 aa13.38□□□□□ -0.27
PKP1-202ENST00000352845 SYCP2Q9BX26 1530 aa13.38□□□□□ -0.27
PKP1-202ENST00000352845 ZNF500O60304 480 aaPredicted RBP13.37□□□□□ -0.27
PKP1-202ENST00000352845 ZSCAN20P17040 1043 aaPredicted RBP13.37□□□□□ -0.27
PKP1-202ENST00000352845 TBC1D32Q96NH3 1257 aa13.37□□□□□ -0.27
PKP1-202ENST00000352845 GPRASP1Q5JY77 1395 aa13.37□□□□□ -0.27
PKP1-202ENST00000352845 DISP3Q9P2K9 1392 aa13.37□□□□□ -0.27
PKP1-202ENST00000352845 UQCRHLA0A096LP55 91 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 UQCRHP07919 91 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 TESK2Q96S53 571 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 LAMC1P11047 1609 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 CCDC141Q6ZP82 1450 aa13.36□□□□□ -0.27
PKP1-202ENST00000352845 PRDM15P57071 1507 aaPredicted RBP13.36□□□□□ -0.27
PKP1-202ENST00000352845 RSPH4AQ5TD94 716 aa13.35□□□□□ -0.27
PKP1-202ENST00000352845 R3HCC1Q9Y3T6 440 aaKnown RBP13.35□□□□□ -0.27
PKP1-202ENST00000352845 CC2D1BQ5T0F9 858 aaKnown RBP13.35□□□□□ -0.27
PKP1-202ENST00000352845 FAM135AQ9P2D6 1515 aa13.34□□□□□ -0.27
PKP1-202ENST00000352845 TSPY4P0CV99 314 aa13.34□□□□□ -0.27
PKP1-202ENST00000352845 TSPY10P0CW01 314 aa13.34□□□□□ -0.27
PKP1-202ENST00000352845 MCM5P33992 734 aa13.33□□□□□ -0.27
PKP1-202ENST00000352845 CHMP4BQ9H444 224 aaKnown RBP13.33□□□□□ -0.27
PKP1-202ENST00000352845 A2MP01023 1474 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms