RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
SMPD4-201ENST00000351288 C14orf37Q86TY3 774 aa13.66□□□□□ -0.22
SMPD4-201ENST00000351288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
SMPD4-201ENST00000351288 CD109Q6YHK3 1445 aa13.66□□□□□ -0.22
SMPD4-201ENST00000351288 FBXO31Q5XUX0 539 aaPredicted RBP13.66□□□□□ -0.22
SMPD4-201ENST00000351288 CABP2Q9NPB3 220 aa13.66□□□□□ -0.22
SMPD4-201ENST00000351288 PLCH2O75038 1416 aa13.65□□□□□ -0.22
SMPD4-201ENST00000351288 ASXL2Q76L83 1435 aa13.65□□□□□ -0.22
SMPD4-201ENST00000351288 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
SMPD4-201ENST00000351288 ABCC2Q92887 1545 aa13.65□□□□□ -0.22
SMPD4-201ENST00000351288 PPP2R1AP30153 589 aa13.65□□□□□ -0.22
SMPD4-201ENST00000351288 TRPM1Q7Z4N2 1603 aa13.65□□□□□ -0.22
SMPD4-201ENST00000351288 RNF123Q5XPI4 1314 aa13.64□□□□□ -0.23
SMPD4-201ENST00000351288 NEFMP07197 916 aa13.63□□□□□ -0.23
SMPD4-201ENST00000351288 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
SMPD4-201ENST00000351288 UGGT1Q9NYU2 1555 aa13.63□□□□□ -0.23
SMPD4-201ENST00000351288 APAF1O14727 1248 aa13.62□□□□□ -0.23
SMPD4-201ENST00000351288 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-201ENST00000351288 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
SMPD4-201ENST00000351288 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
SMPD4-201ENST00000351288 ANP32AP39687 249 aaKnown RBP13.62□□□□□ -0.23
SMPD4-201ENST00000351288 COL17A1Q9UMD9 1497 aaPredicted RBP13.62□□□□□ -0.23
SMPD4-201ENST00000351288 MAGI2Q86UL8 1455 aa13.62□□□□□ -0.23
SMPD4-201ENST00000351288 DAXXQ9UER7 740 aaPredicted RBP13.61□□□□□ -0.23
SMPD4-201ENST00000351288 SPINK5Q9NQ38 1064 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-201ENST00000351288 CENPJQ9HC77 1338 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-201ENST00000351288 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
SMPD4-201ENST00000351288 DUOX2Q9NRD8 1548 aa13.6□□□□□ -0.23
SMPD4-201ENST00000351288 RGS3P49796 1198 aa13.6□□□□□ -0.23
SMPD4-201ENST00000351288 AMER1Q5JTC6 1135 aaPredicted RBP13.6□□□□□ -0.23
SMPD4-201ENST00000351288 ZCCHC11Q5TAX3 1644 aaKnown RBP13.59□□□□□ -0.23
SMPD4-201ENST00000351288 VGFO15240 615 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-201ENST00000351288 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
SMPD4-201ENST00000351288 GGNBP2Q9H3C7 697 aa13.59□□□□□ -0.23
SMPD4-201ENST00000351288 PLEKHH1Q9ULM0 1364 aa13.59□□□□□ -0.23
SMPD4-201ENST00000351288 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
SMPD4-201ENST00000351288 IDI1Q13907 227 aa13.58□□□□□ -0.24
SMPD4-201ENST00000351288 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.24
SMPD4-201ENST00000351288 EIF3AQ14152 1382 aaKnown RBP13.57□□□□□ -0.24
SMPD4-201ENST00000351288 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-201ENST00000351288 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
SMPD4-201ENST00000351288 CLUAP1Q96AJ1 413 aa13.57□□□□□ -0.24
SMPD4-201ENST00000351288 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
SMPD4-201ENST00000351288 BCAR3O75815 825 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 PDE4AP27815 886 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 ATP10AO60312 1499 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 UNC13BO14795 1591 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 MAST1Q9Y2H9 1570 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
SMPD4-201ENST00000351288 LMOD2Q6P5Q4 547 aa13.55□□□□□ -0.24
SMPD4-201ENST00000351288 PRDM15P57071 1507 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-201ENST00000351288 IQGAP3Q86VI3 1631 aa13.55□□□□□ -0.24
SMPD4-201ENST00000351288 PRAM1Q96QH2 718 aa13.54□□□□□ -0.24
SMPD4-201ENST00000351288 E9PCH4 1651 aa13.54□□□□□ -0.24
SMPD4-201ENST00000351288 ABCC1P33527 1531 aa13.53□□□□□ -0.24
SMPD4-201ENST00000351288 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
SMPD4-201ENST00000351288 PDE3BQ13370 1112 aa13.53□□□□□ -0.24
SMPD4-201ENST00000351288 IPO9Q96P70 1041 aaKnown RBP13.53□□□□□ -0.24
SMPD4-201ENST00000351288 DUSP27Q5VZP5 1158 aa13.53□□□□□ -0.24
SMPD4-201ENST00000351288 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.24
SMPD4-201ENST00000351288 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.52□□□□□ -0.24
SMPD4-201ENST00000351288 MAPK8IP3Q9UPT6 1336 aa13.52□□□□□ -0.24
SMPD4-201ENST00000351288 FBLN1P23142 703 aa13.52□□□□□ -0.25
SMPD4-201ENST00000351288 SHROOM2Q13796 1616 aa13.52□□□□□ -0.25
SMPD4-201ENST00000351288 MTHFSP49914 203 aa13.51□□□□□ -0.25
SMPD4-201ENST00000351288 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
SMPD4-201ENST00000351288 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
SMPD4-201ENST00000351288 PLXNC1O60486 1568 aa13.5□□□□□ -0.25
SMPD4-201ENST00000351288 DEKP35659 375 aaKnown RBP13.5□□□□□ -0.25
SMPD4-201ENST00000351288 EVC2Q86UK5 1308 aa13.5□□□□□ -0.25
SMPD4-201ENST00000351288 NOS1P29475 1434 aa13.5□□□□□ -0.25
SMPD4-201ENST00000351288 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
SMPD4-201ENST00000351288 ELL2O00472 640 aaPredicted RBP13.5□□□□□ -0.25
SMPD4-201ENST00000351288 HDGFL2Q7Z4V5 671 aaPredicted RBP13.49□□□□□ -0.25
SMPD4-201ENST00000351288 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
SMPD4-201ENST00000351288 SLC26A8Q96RN1 970 aa13.49□□□□□ -0.25
SMPD4-201ENST00000351288 TCERG1O14776 1098 aaKnown RBP13.49□□□□□ -0.25
SMPD4-201ENST00000351288 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
SMPD4-201ENST00000351288 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
SMPD4-201ENST00000351288 TNNQ9UQP3 1299 aa13.47□□□□□ -0.25
SMPD4-201ENST00000351288 PANK1Q8TE04 598 aa13.46□□□□□ -0.25
SMPD4-201ENST00000351288 BACH2Q9BYV9 841 aa13.46□□□□□ -0.25
SMPD4-201ENST00000351288 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
SMPD4-201ENST00000351288 ATP7AQ04656 1500 aa13.46□□□□□ -0.25
SMPD4-201ENST00000351288 MADDQ8WXG6 1647 aa13.46□□□□□ -0.26
SMPD4-201ENST00000351288 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.26
SMPD4-201ENST00000351288 CABP1Q9NZU7 370 aa13.46□□□□□ -0.26
SMPD4-201ENST00000351288 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.26
SMPD4-201ENST00000351288 HMOX1P09601 288 aa13.45□□□□□ -0.26
SMPD4-201ENST00000351288 COG6Q9Y2V7 657 aa13.45□□□□□ -0.26
SMPD4-201ENST00000351288 SLFN5Q08AF3 891 aa13.45□□□□□ -0.26
SMPD4-201ENST00000351288 EIF2AK4Q9P2K8 1649 aaKnown RBP13.45□□□□□ -0.26
SMPD4-201ENST00000351288 NUTM2GQ5VZR2 741 aa13.44□□□□□ -0.26
SMPD4-201ENST00000351288 FTSJ3Q8IY81 847 aaKnown RBP13.44□□□□□ -0.26
SMPD4-201ENST00000351288 RTL5Q5HYW3 569 aaPredicted RBP13.44□□□□□ -0.26
SMPD4-201ENST00000351288 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
SMPD4-201ENST00000351288 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
SMPD4-201ENST00000351288 TRPM2O94759 1503 aa13.42□□□□□ -0.26
SMPD4-201ENST00000351288 ASXL1Q8IXJ9 1541 aa13.42□□□□□ -0.26
SMPD4-201ENST00000351288 NSD3Q9BZ95 1437 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms