RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 DDRGK1Q96HY6 314 aa15.61■□□□□ 0.09
SMAD9-201ENST00000350148 CFAP74Q9C0B2 1584 aa15.6■□□□□ 0.09
SMAD9-201ENST00000350148 NBPF1Q3BBV0 1214 aa15.6■□□□□ 0.09
SMAD9-201ENST00000350148 ANP32BQ92688 251 aaKnown RBP15.6■□□□□ 0.09
SMAD9-201ENST00000350148 ADGBQ8N7X0 1667 aa15.6■□□□□ 0.09
SMAD9-201ENST00000350148 TRAPPC8Q9Y2L5 1435 aa15.59■□□□□ 0.09
SMAD9-201ENST00000350148 GCC2Q8IWJ2 1684 aa15.59■□□□□ 0.09
SMAD9-201ENST00000350148 MAGI3Q5TCQ9 1506 aa15.59■□□□□ 0.09
SMAD9-201ENST00000350148 ARHGEF12Q9NZN5 1544 aa15.59■□□□□ 0.09
SMAD9-201ENST00000350148 CHD1O14646 1710 aa15.59■□□□□ 0.09
SMAD9-201ENST00000350148 ATAD2Q6PL18 1390 aa15.57■□□□□ 0.08
SMAD9-201ENST00000350148 PAK3O75914 559 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-201ENST00000350148 FRAT1Q92837 279 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-201ENST00000350148 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.57■□□□□ 0.08
SMAD9-201ENST00000350148 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
SMAD9-201ENST00000350148 E9PSI1 815 aa15.57■□□□□ 0.08
SMAD9-201ENST00000350148 CDK11BP21127 795 aaKnown RBP15.57■□□□□ 0.08
SMAD9-201ENST00000350148 NEO1Q92859 1461 aa15.56■□□□□ 0.08
SMAD9-201ENST00000350148 EIF2AK4Q9P2K8 1649 aaKnown RBP15.56■□□□□ 0.08
SMAD9-201ENST00000350148 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
SMAD9-201ENST00000350148 SCAF11Q99590 1463 aaKnown RBP15.55■□□□□ 0.08
SMAD9-201ENST00000350148 TXNDC2Q86VQ3 553 aa15.55■□□□□ 0.08
SMAD9-201ENST00000350148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.54■□□□□ 0.08
SMAD9-201ENST00000350148 AMPHP49418 695 aa15.54■□□□□ 0.08
SMAD9-201ENST00000350148 MYO5CQ9NQX4 1742 aa15.54■□□□□ 0.08
SMAD9-201ENST00000350148 TMEM132EQ6IEE7 984 aa15.54■□□□□ 0.08
SMAD9-201ENST00000350148 DIAPH1O60610 1272 aaKnown RBP15.52■□□□□ 0.08
SMAD9-201ENST00000350148 ATP7AQ04656 1500 aa15.52■□□□□ 0.08
SMAD9-201ENST00000350148 BECN1Q14457 450 aa15.52■□□□□ 0.07
SMAD9-201ENST00000350148 CASC1Q6TDU7 716 aa15.52■□□□□ 0.07
SMAD9-201ENST00000350148 PZPP20742 1482 aa15.52■□□□□ 0.07
SMAD9-201ENST00000350148 ZNF692Q9BU19 519 aaPredicted RBP15.51■□□□□ 0.07
SMAD9-201ENST00000350148 RUNDC1Q96C34 613 aa15.51■□□□□ 0.07
SMAD9-201ENST00000350148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.51■□□□□ 0.07
SMAD9-201ENST00000350148 HSP90AA1P07900 732 aaKnown RBP15.51■□□□□ 0.07
SMAD9-201ENST00000350148 SOX12O15370 315 aa15.5■□□□□ 0.07
SMAD9-201ENST00000350148 PLEKHG5O94827 1062 aa15.5■□□□□ 0.07
SMAD9-201ENST00000350148 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
SMAD9-201ENST00000350148 PRAM1Q96QH2 718 aa15.5■□□□□ 0.07
SMAD9-201ENST00000350148 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
SMAD9-201ENST00000350148 B4GALNT3Q6L9W6 998 aa15.49■□□□□ 0.07
SMAD9-201ENST00000350148 MAST1Q9Y2H9 1570 aa15.49■□□□□ 0.07
SMAD9-201ENST00000350148 NINLQ9Y2I6 1382 aa15.48■□□□□ 0.07
SMAD9-201ENST00000350148 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
SMAD9-201ENST00000350148 CABP2Q9NPB3 220 aa15.48■□□□□ 0.07
SMAD9-201ENST00000350148 HDAC5Q9UQL6 1122 aa15.48■□□□□ 0.07
SMAD9-201ENST00000350148 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
SMAD9-201ENST00000350148 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
SMAD9-201ENST00000350148 C14orf93Q9H972 538 aaKnown RBP15.47■□□□□ 0.07
SMAD9-201ENST00000350148 ARAP3Q8WWN8 1544 aa15.47■□□□□ 0.07
SMAD9-201ENST00000350148 PREX2Q70Z35 1606 aa15.47■□□□□ 0.07
SMAD9-201ENST00000350148 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
SMAD9-201ENST00000350148 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
SMAD9-201ENST00000350148 ANKLE2Q86XL3 938 aa15.46■□□□□ 0.07
SMAD9-201ENST00000350148 UHRF1BP1Q6BDS2 1440 aa15.46■□□□□ 0.06
SMAD9-201ENST00000350148 MBD5Q9P267 1494 aa15.45■□□□□ 0.06
SMAD9-201ENST00000350148 NOP58Q9Y2X3 529 aaKnown RBP15.45■□□□□ 0.06
SMAD9-201ENST00000350148 NOS1P29475 1434 aa15.45■□□□□ 0.06
SMAD9-201ENST00000350148 CSB-PGBD3P0DP91 1061 aa15.44■□□□□ 0.06
SMAD9-201ENST00000350148 AAMPQ13685 434 aa15.44■□□□□ 0.06
SMAD9-201ENST00000350148 IDI1Q13907 227 aa15.44■□□□□ 0.06
SMAD9-201ENST00000350148 CDK19Q9BWU1 502 aa15.44■□□□□ 0.06
SMAD9-201ENST00000350148 STK31Q9BXU1 1019 aa15.44■□□□□ 0.06
SMAD9-201ENST00000350148 TCERG1O14776 1098 aaKnown RBP15.44■□□□□ 0.06
SMAD9-201ENST00000350148 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
SMAD9-201ENST00000350148 PUS7Q96PZ0 661 aaKnown RBP15.43■□□□□ 0.06
SMAD9-201ENST00000350148 SMC4Q9NTJ3 1288 aa15.43■□□□□ 0.06
SMAD9-201ENST00000350148 NCLP19338 710 aaKnown RBP15.42■□□□□ 0.06
SMAD9-201ENST00000350148 NSD2O96028 1365 aa15.42■□□□□ 0.06
SMAD9-201ENST00000350148 ATP10AO60312 1499 aa15.42■□□□□ 0.06
SMAD9-201ENST00000350148 APAF1O14727 1248 aa15.42■□□□□ 0.06
SMAD9-201ENST00000350148 ADGRF5Q8IZF2 1346 aa15.41■□□□□ 0.06
SMAD9-201ENST00000350148 GPRASP1Q5JY77 1395 aa15.41■□□□□ 0.06
SMAD9-201ENST00000350148 TNRQ92752 1358 aa15.41■□□□□ 0.06
SMAD9-201ENST00000350148 RRP1P56182 461 aaKnown RBP15.41■□□□□ 0.06
SMAD9-201ENST00000350148 PSME1Q06323 249 aa15.41■□□□□ 0.06
SMAD9-201ENST00000350148 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
SMAD9-201ENST00000350148 SAMD9LQ8IVG5 1584 aa15.41■□□□□ 0.06
SMAD9-201ENST00000350148 ABCC1P33527 1531 aa15.4■□□□□ 0.06
SMAD9-201ENST00000350148 ARXQ96QS3 562 aa15.4■□□□□ 0.06
SMAD9-201ENST00000350148 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
SMAD9-201ENST00000350148 ATF3P18847 181 aa15.39■□□□□ 0.05
SMAD9-201ENST00000350148 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
SMAD9-201ENST00000350148 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-201ENST00000350148 GGNBP2Q9H3C7 697 aa15.38■□□□□ 0.05
SMAD9-201ENST00000350148 A0A0G2JS52 829 aa15.38■□□□□ 0.05
SMAD9-201ENST00000350148 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
SMAD9-201ENST00000350148 MTHFSP49914 203 aa15.38■□□□□ 0.05
SMAD9-201ENST00000350148 TRIM44Q96DX7 344 aaPredicted RBP15.38■□□□□ 0.05
SMAD9-201ENST00000350148 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
SMAD9-201ENST00000350148 GNAI1P63096 354 aa15.37■□□□□ 0.05
SMAD9-201ENST00000350148 ITPRIPQ8IWB1 547 aa15.36■□□□□ 0.05
SMAD9-201ENST00000350148 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
SMAD9-201ENST00000350148 KDM5DQ9BY66 1539 aa15.36■□□□□ 0.05
SMAD9-201ENST00000350148 TTC37Q6PGP7 1564 aa15.36■□□□□ 0.05
SMAD9-201ENST00000350148 RGS3P49796 1198 aa15.36■□□□□ 0.05
SMAD9-201ENST00000350148 HMMRO75330 724 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 CCDC61Q9Y6R9 512 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 MAGI2Q86UL8 1455 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 ADAMTS8Q9UP79 889 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms