RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 MADDQ8WXG6 1647 aa18.64■□□□□ 0.57
UBA3-201ENST00000349511 SLC52A1Q9NWF4 448 aa18.63■□□□□ 0.57
UBA3-201ENST00000349511 ERVK-7P63135 1459 aa18.63■□□□□ 0.57
UBA3-201ENST00000349511 CFAP70Q5T0N1 1121 aa18.62■□□□□ 0.57
UBA3-201ENST00000349511 PIK3C2BO00750 1634 aa18.62■□□□□ 0.57
UBA3-201ENST00000349511 CEBPAP49715 358 aaPredicted RBP18.61■□□□□ 0.57
UBA3-201ENST00000349511 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
UBA3-201ENST00000349511 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
UBA3-201ENST00000349511 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
UBA3-201ENST00000349511 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
UBA3-201ENST00000349511 IFT172Q9UG01 1749 aa18.59■□□□□ 0.57
UBA3-201ENST00000349511 CCDC7Q96M83 1385 aa18.59■□□□□ 0.57
UBA3-201ENST00000349511 STAC3Q96MF2 364 aa18.58■□□□□ 0.57
UBA3-201ENST00000349511 GPRASP1Q5JY77 1395 aa18.58■□□□□ 0.56
UBA3-201ENST00000349511 PPLO60437 1756 aa18.56■□□□□ 0.56
UBA3-201ENST00000349511 MYOM2P54296 1465 aa18.56■□□□□ 0.56
UBA3-201ENST00000349511 SPATA31D1Q6ZQQ2 1576 aa18.54■□□□□ 0.56
UBA3-201ENST00000349511 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
UBA3-201ENST00000349511 TMEM131LA2VDJ0 1609 aa18.54■□□□□ 0.56
UBA3-201ENST00000349511 MYT1Q01538 1121 aa18.53■□□□□ 0.56
UBA3-201ENST00000349511 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
UBA3-201ENST00000349511 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
UBA3-201ENST00000349511 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.55
UBA3-201ENST00000349511 NRXN1Q9ULB1 1477 aa18.51■□□□□ 0.55
UBA3-201ENST00000349511 PIK3C2GO75747 1445 aa18.5■□□□□ 0.55
UBA3-201ENST00000349511 LAMC1P11047 1609 aa18.5■□□□□ 0.55
UBA3-201ENST00000349511 CNGB1Q14028 1251 aaPredicted RBP18.49■□□□□ 0.55
UBA3-201ENST00000349511 TESK2Q96S53 571 aa18.49■□□□□ 0.55
UBA3-201ENST00000349511 POLR1AO95602 1720 aaPredicted RBP18.49■□□□□ 0.55
UBA3-201ENST00000349511 FER1L4A9Z1Z3 1794 aa18.49■□□□□ 0.55
UBA3-201ENST00000349511 TNRQ92752 1358 aa18.48■□□□□ 0.55
UBA3-201ENST00000349511 CCER2I3L3R5 266 aa18.48■□□□□ 0.55
UBA3-201ENST00000349511 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
UBA3-201ENST00000349511 ANP32CO43423 234 aa18.47■□□□□ 0.55
UBA3-201ENST00000349511 TRAK1Q9UPV9 953 aa18.47■□□□□ 0.55
UBA3-201ENST00000349511 SCAF11Q99590 1463 aaKnown RBP18.47■□□□□ 0.55
UBA3-201ENST00000349511 KIAA1210Q9ULL0 1709 aa18.47■□□□□ 0.55
UBA3-201ENST00000349511 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.55
UBA3-201ENST00000349511 IQGAP1P46940 1657 aa18.46■□□□□ 0.55
UBA3-201ENST00000349511 DISP3Q9P2K9 1392 aa18.45■□□□□ 0.54
UBA3-201ENST00000349511 C3P01024 1663 aa18.45■□□□□ 0.54
UBA3-201ENST00000349511 TMF1P82094 1093 aa18.42■□□□□ 0.54
UBA3-201ENST00000349511 STK26Q9P289 416 aa18.41■□□□□ 0.54
UBA3-201ENST00000349511 RIMS2Q9UQ26 1411 aa18.41■□□□□ 0.54
UBA3-201ENST00000349511 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
UBA3-201ENST00000349511 ADGRB1O14514 1584 aa18.39■□□□□ 0.54
UBA3-201ENST00000349511 EIF3AQ14152 1382 aaKnown RBP18.39■□□□□ 0.54
UBA3-201ENST00000349511 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
UBA3-201ENST00000349511 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
UBA3-201ENST00000349511 SAFB2Q14151 953 aaKnown RBP eCLIP18.38■□□□□ 0.53
UBA3-201ENST00000349511 FKBP8Q14318 412 aa18.38■□□□□ 0.53
UBA3-201ENST00000349511 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
UBA3-201ENST00000349511 BCANQ96GW7 911 aa18.37■□□□□ 0.53
UBA3-201ENST00000349511 UBR1Q8IWV7 1749 aa18.36■□□□□ 0.53
UBA3-201ENST00000349511 CENPJQ9HC77 1338 aaPredicted RBP18.35■□□□□ 0.53
UBA3-201ENST00000349511 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
UBA3-201ENST00000349511 TMEM2Q9UHN6 1383 aa18.33■□□□□ 0.53
UBA3-201ENST00000349511 ALKQ9UM73 1620 aa18.33■□□□□ 0.53
UBA3-201ENST00000349511 LTKP29376 864 aa18.33■□□□□ 0.52
UBA3-201ENST00000349511 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.32■□□□□ 0.52
UBA3-201ENST00000349511 NLRP1Q9C000 1473 aa18.32■□□□□ 0.52
UBA3-201ENST00000349511 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
UBA3-201ENST00000349511 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
UBA3-201ENST00000349511 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
UBA3-201ENST00000349511 PANK3Q9H999 370 aa18.3■□□□□ 0.52
UBA3-201ENST00000349511 ADAMTSL3P82987 1691 aa18.3■□□□□ 0.52
UBA3-201ENST00000349511 PTPRMP28827 1452 aa18.29■□□□□ 0.52
UBA3-201ENST00000349511 YTHDC2Q9H6S0 1430 aaKnown RBP18.28■□□□□ 0.52
UBA3-201ENST00000349511 QRICH2Q9H0J4 1663 aa18.28■□□□□ 0.52
UBA3-201ENST00000349511 NEFLP07196 543 aa18.28■□□□□ 0.52
UBA3-201ENST00000349511 CCDC184Q52MB2 194 aa18.28■□□□□ 0.52
UBA3-201ENST00000349511 PRAM1Q96QH2 718 aa18.28■□□□□ 0.52
UBA3-201ENST00000349511 ARHGEF28Q8N1W1 1705 aaKnown RBP18.28■□□□□ 0.52
UBA3-201ENST00000349511 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.51
UBA3-201ENST00000349511 CDCA8Q53HL2 280 aa18.26■□□□□ 0.51
UBA3-201ENST00000349511 POGKQ9P215 609 aa18.26■□□□□ 0.51
UBA3-201ENST00000349511 NRXN3Q9Y4C0 1643 aa18.26■□□□□ 0.51
UBA3-201ENST00000349511 METP08581 1390 aa18.26■□□□□ 0.51
UBA3-201ENST00000349511 THEMISQ8N1K5 641 aaPredicted RBP18.26■□□□□ 0.51
UBA3-201ENST00000349511 KDM5AP29375 1690 aaKnown RBP18.26■□□□□ 0.51
UBA3-201ENST00000349511 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
UBA3-201ENST00000349511 SLC26A8Q96RN1 970 aa18.25■□□□□ 0.51
UBA3-201ENST00000349511 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
UBA3-201ENST00000349511 MINK1Q8N4C8 1332 aaPredicted RBP18.24■□□□□ 0.51
UBA3-201ENST00000349511 PER1O15534 1290 aaPredicted RBP18.24■□□□□ 0.51
UBA3-201ENST00000349511 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
UBA3-201ENST00000349511 CC2D1BQ5T0F9 858 aaKnown RBP18.22■□□□□ 0.51
UBA3-201ENST00000349511 TMC1Q8TDI8 760 aa18.22■□□□□ 0.51
UBA3-201ENST00000349511 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
UBA3-201ENST00000349511 CABP2Q9NPB3 220 aa18.22■□□□□ 0.51
UBA3-201ENST00000349511 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
UBA3-201ENST00000349511 CEP170BQ9Y4F5 1589 aaPredicted RBP18.2■□□□□ 0.5
UBA3-201ENST00000349511 PLEKHH1Q9ULM0 1364 aa18.2■□□□□ 0.5
UBA3-201ENST00000349511 MYOM1P52179 1685 aa18.19■□□□□ 0.5
UBA3-201ENST00000349511 ADAMTS13Q76LX8 1427 aa18.19■□□□□ 0.5
UBA3-201ENST00000349511 PLEKHG1Q9ULL1 1385 aa18.19■□□□□ 0.5
UBA3-201ENST00000349511 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
UBA3-201ENST00000349511 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
UBA3-201ENST00000349511 LRPPRCP42704 1394 aaKnown RBP18.18■□□□□ 0.5
UBA3-201ENST00000349511 MRS2Q9HD23 443 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms