RNA–Protein interactions for RNA: ENST00000346691.9

ATRIP-202, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-202ENST00000346691 ADGRB3O60242 1522 aa25.37■■□□□ 1.65
ATRIP-202ENST00000346691 SCAF11Q99590 1463 aaKnown RBP25.36■■□□□ 1.65
ATRIP-202ENST00000346691 MYOM2P54296 1465 aa25.36■■□□□ 1.65
ATRIP-202ENST00000346691 PER1O15534 1290 aaPredicted RBP25.35■■□□□ 1.65
ATRIP-202ENST00000346691 BCANQ96GW7 911 aa25.35■■□□□ 1.65
ATRIP-202ENST00000346691 STAC3Q96MF2 364 aa25.35■■□□□ 1.65
ATRIP-202ENST00000346691 NOS1P29475 1434 aa25.34■■□□□ 1.65
ATRIP-202ENST00000346691 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
ATRIP-202ENST00000346691 KIAA1210Q9ULL0 1709 aa25.33■■□□□ 1.65
ATRIP-202ENST00000346691 PANK3Q9H999 370 aa25.33■■□□□ 1.65
ATRIP-202ENST00000346691 TSHZ2Q9NRE2 1034 aa25.32■■□□□ 1.64
ATRIP-202ENST00000346691 SYNMO15061 1565 aa25.3■■□□□ 1.64
ATRIP-202ENST00000346691 TMC1Q8TDI8 760 aa25.29■■□□□ 1.64
ATRIP-202ENST00000346691 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
ATRIP-202ENST00000346691 NRXN1Q9ULB1 1477 aa25.28■■□□□ 1.64
ATRIP-202ENST00000346691 PPLO60437 1756 aa25.28■■□□□ 1.64
ATRIP-202ENST00000346691 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
ATRIP-202ENST00000346691 PNISRQ8TF01 805 aaKnown RBP25.27■■□□□ 1.64
ATRIP-202ENST00000346691 RALBP1Q15311 655 aa25.27■■□□□ 1.64
ATRIP-202ENST00000346691 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
ATRIP-202ENST00000346691 KTN1Q86UP2 1357 aaKnown RBP25.26■■□□□ 1.63
ATRIP-202ENST00000346691 ZBED9Q6R2W3 1325 aa25.26■■□□□ 1.63
ATRIP-202ENST00000346691 PARD3Q8TEW0 1356 aa25.26■■□□□ 1.63
ATRIP-202ENST00000346691 ZMYM4Q5VZL5 1548 aa25.25■■□□□ 1.63
ATRIP-202ENST00000346691 PIK3C2BO00750 1634 aa25.23■■□□□ 1.63
ATRIP-202ENST00000346691 ZC3H13Q5T200 1668 aaKnown RBP25.22■■□□□ 1.63
ATRIP-202ENST00000346691 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
ATRIP-202ENST00000346691 EIF3AQ14152 1382 aaKnown RBP25.21■■□□□ 1.63
ATRIP-202ENST00000346691 NEFLP07196 543 aa25.21■■□□□ 1.63
ATRIP-202ENST00000346691 MYOM1P52179 1685 aa25.2■■□□□ 1.62
ATRIP-202ENST00000346691 SENP3Q9H4L4 574 aaPredicted RBP25.2■■□□□ 1.62
ATRIP-202ENST00000346691 PIK3C2GO75747 1445 aa25.2■■□□□ 1.62
ATRIP-202ENST00000346691 IRX6P78412 446 aaPredicted RBP25.19■■□□□ 1.62
ATRIP-202ENST00000346691 IDI1Q13907 227 aa25.19■■□□□ 1.62
ATRIP-202ENST00000346691 KIF13AQ9H1H9 1805 aa25.18■■□□□ 1.62
ATRIP-202ENST00000346691 ARHGAP31Q2M1Z3 1444 aa25.18■■□□□ 1.62
ATRIP-202ENST00000346691 TMEM132EQ6IEE7 984 aa25.18■■□□□ 1.62
ATRIP-202ENST00000346691 ERVK-7P63135 1459 aa25.16■■□□□ 1.62
ATRIP-202ENST00000346691 FBXO31Q5XUX0 539 aaPredicted RBP25.16■■□□□ 1.62
ATRIP-202ENST00000346691 MYO5BQ9ULV0 1848 aa25.16■■□□□ 1.62
ATRIP-202ENST00000346691 PREX1Q8TCU6 1659 aa25.15■■□□□ 1.62
ATRIP-202ENST00000346691 NLRP13Q86W25 1043 aa25.15■■□□□ 1.62
ATRIP-202ENST00000346691 TRAK1Q9UPV9 953 aa25.15■■□□□ 1.62
ATRIP-202ENST00000346691 LRPPRCP42704 1394 aaKnown RBP25.15■■□□□ 1.62
ATRIP-202ENST00000346691 NEXMIFQ5QGS0 1516 aa25.14■■□□□ 1.62
ATRIP-202ENST00000346691 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.62
ATRIP-202ENST00000346691 KDM5AP29375 1690 aaKnown RBP25.14■■□□□ 1.61
ATRIP-202ENST00000346691 ADGRB1O14514 1584 aa25.13■■□□□ 1.61
ATRIP-202ENST00000346691 SETBP1Q9Y6X0 1596 aa25.13■■□□□ 1.61
ATRIP-202ENST00000346691 RPGRIP1LQ68CZ1 1315 aa25.12■■□□□ 1.61
ATRIP-202ENST00000346691 CDCA8Q53HL2 280 aa25.11■■□□□ 1.61
ATRIP-202ENST00000346691 MYO3AQ8NEV4 1616 aa25.11■■□□□ 1.61
ATRIP-202ENST00000346691 ANP32EQ9BTT0 268 aa25.11■■□□□ 1.61
ATRIP-202ENST00000346691 MLECQ14165 292 aa25.09■■□□□ 1.61
ATRIP-202ENST00000346691 KNSTRNQ9Y448 316 aa25.09■■□□□ 1.61
ATRIP-202ENST00000346691 AMER1Q5JTC6 1135 aaPredicted RBP25.08■■□□□ 1.6
ATRIP-202ENST00000346691 CENPJQ9HC77 1338 aaPredicted RBP25.07■■□□□ 1.6
ATRIP-202ENST00000346691 CLTCQ00610 1675 aaKnown RBP25.06■■□□□ 1.6
ATRIP-202ENST00000346691 QRICH2Q9H0J4 1663 aa25.06■■□□□ 1.6
ATRIP-202ENST00000346691 TMEM131LA2VDJ0 1609 aa25.06■■□□□ 1.6
ATRIP-202ENST00000346691 SLC52A1Q9NWF4 448 aa25.05■■□□□ 1.6
ATRIP-202ENST00000346691 REREQ9P2R6 1566 aa25.04■■□□□ 1.6
ATRIP-202ENST00000346691 VGFO15240 615 aaPredicted RBP25.04■■□□□ 1.6
ATRIP-202ENST00000346691 SALL2Q9Y467 1007 aaPredicted RBP25.03■■□□□ 1.6
ATRIP-202ENST00000346691 AGLP35573 1532 aa25.02■■□□□ 1.6
ATRIP-202ENST00000346691 ASXL1Q8IXJ9 1541 aa25.02■■□□□ 1.6
ATRIP-202ENST00000346691 SMG6Q86US8 1419 aaKnown RBP25■■□□□ 1.59
ATRIP-202ENST00000346691 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
ATRIP-202ENST00000346691 SBNO2Q9Y2G9 1366 aa25■■□□□ 1.59
ATRIP-202ENST00000346691 PPP2R1AP30153 589 aa24.99■■□□□ 1.59
ATRIP-202ENST00000346691 ARHGEF40Q8TER5 1519 aa24.98■■□□□ 1.59
ATRIP-202ENST00000346691 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
ATRIP-202ENST00000346691 NUDCQ9Y266 331 aa24.96■■□□□ 1.59
ATRIP-202ENST00000346691 SAFB2Q14151 953 aaKnown RBP eCLIP24.95■■□□□ 1.59
ATRIP-202ENST00000346691 STK26Q9P289 416 aa24.95■■□□□ 1.58
ATRIP-202ENST00000346691 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
ATRIP-202ENST00000346691 ZFYVE9O95405 1425 aa24.93■■□□□ 1.58
ATRIP-202ENST00000346691 SLC12A5Q9H2X9 1139 aa24.92■■□□□ 1.58
ATRIP-202ENST00000346691 STAG3Q9UJ98 1225 aa24.91■■□□□ 1.58
ATRIP-202ENST00000346691 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
ATRIP-202ENST00000346691 BLMP54132 1417 aaPredicted RBP24.89■■□□□ 1.57
ATRIP-202ENST00000346691 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.57
ATRIP-202ENST00000346691 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
ATRIP-202ENST00000346691 NPC1L1Q9UHC9 1359 aa24.88■■□□□ 1.57
ATRIP-202ENST00000346691 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
ATRIP-202ENST00000346691 NSD3Q9BZ95 1437 aa24.85■■□□□ 1.57
ATRIP-202ENST00000346691 A2ML1A8K2U0 1454 aa24.85■■□□□ 1.57
ATRIP-202ENST00000346691 CABP2Q9NPB3 220 aa24.84■■□□□ 1.57
ATRIP-202ENST00000346691 CDCA7LQ96GN5 454 aa24.83■■□□□ 1.57
ATRIP-202ENST00000346691 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
ATRIP-202ENST00000346691 PTPRMP28827 1452 aa24.82■■□□□ 1.56
ATRIP-202ENST00000346691 EVC2Q86UK5 1308 aa24.81■■□□□ 1.56
ATRIP-202ENST00000346691 ZMYM3Q14202 1370 aa24.81■■□□□ 1.56
ATRIP-202ENST00000346691 YTHDC2Q9H6S0 1430 aaKnown RBP24.8■■□□□ 1.56
ATRIP-202ENST00000346691 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
ATRIP-202ENST00000346691 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
ATRIP-202ENST00000346691 MINK1Q8N4C8 1332 aaPredicted RBP24.79■■□□□ 1.56
ATRIP-202ENST00000346691 ESF1Q9H501 851 aaKnown RBP24.78■■□□□ 1.56
ATRIP-202ENST00000346691 RBM19Q9Y4C8 960 aaKnown RBP24.78■■□□□ 1.56
ATRIP-202ENST00000346691 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms