RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 ZFYVE16Q7Z3T8 1539 aa17.81■□□□□ 0.44
CSNK1G3-201ENST00000345990 TTC37Q6PGP7 1564 aa17.81■□□□□ 0.44
CSNK1G3-201ENST00000345990 SAMD9LQ8IVG5 1584 aa17.81■□□□□ 0.44
CSNK1G3-201ENST00000345990 LMOD3Q0VAK6 560 aa17.81■□□□□ 0.44
CSNK1G3-201ENST00000345990 ARHGEF12Q9NZN5 1544 aa17.81■□□□□ 0.44
CSNK1G3-201ENST00000345990 ATF3P18847 181 aa17.8■□□□□ 0.44
CSNK1G3-201ENST00000345990 PLEKHG5O94827 1062 aa17.8■□□□□ 0.44
CSNK1G3-201ENST00000345990 MAST1Q9Y2H9 1570 aa17.8■□□□□ 0.44
CSNK1G3-201ENST00000345990 PRAM1Q96QH2 718 aa17.79■□□□□ 0.44
CSNK1G3-201ENST00000345990 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
CSNK1G3-201ENST00000345990 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
CSNK1G3-201ENST00000345990 CCDC136Q96JN2 1154 aa17.79■□□□□ 0.44
CSNK1G3-201ENST00000345990 PZPP20742 1482 aa17.79■□□□□ 0.44
CSNK1G3-201ENST00000345990 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
CSNK1G3-201ENST00000345990 NEUROD2Q15784 382 aa17.78■□□□□ 0.44
CSNK1G3-201ENST00000345990 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
CSNK1G3-201ENST00000345990 AMPHP49418 695 aa17.77■□□□□ 0.44
CSNK1G3-201ENST00000345990 FBXO31Q5XUX0 539 aaPredicted RBP17.77■□□□□ 0.44
CSNK1G3-201ENST00000345990 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
CSNK1G3-201ENST00000345990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.77■□□□□ 0.44
CSNK1G3-201ENST00000345990 NOS1P29475 1434 aa17.75■□□□□ 0.43
CSNK1G3-201ENST00000345990 EIF2AK4Q9P2K8 1649 aaKnown RBP17.75■□□□□ 0.43
CSNK1G3-201ENST00000345990 SOX12O15370 315 aa17.75■□□□□ 0.43
CSNK1G3-201ENST00000345990 PROSER2Q86WR7 435 aaPredicted RBP17.74■□□□□ 0.43
CSNK1G3-201ENST00000345990 PSME1Q06323 249 aa17.74■□□□□ 0.43
CSNK1G3-201ENST00000345990 RALGAPBQ86X10 1494 aa17.74■□□□□ 0.43
CSNK1G3-201ENST00000345990 GPRASP1Q5JY77 1395 aa17.73■□□□□ 0.43
CSNK1G3-201ENST00000345990 BRD4O60885 1362 aaPredicted RBP17.73■□□□□ 0.43
CSNK1G3-201ENST00000345990 CABP2Q9NPB3 220 aa17.72■□□□□ 0.43
CSNK1G3-201ENST00000345990 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 CSB-PGBD3P0DP91 1061 aa17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 ZMYM3Q14202 1370 aa17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 ABCA9Q8IUA7 1624 aa17.71■□□□□ 0.43
CSNK1G3-201ENST00000345990 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
CSNK1G3-201ENST00000345990 ERICH6BQ5W0A0 696 aa17.7■□□□□ 0.42
CSNK1G3-201ENST00000345990 CDK19Q9BWU1 502 aa17.7■□□□□ 0.42
CSNK1G3-201ENST00000345990 HECW2Q9P2P5 1572 aa17.7■□□□□ 0.42
CSNK1G3-201ENST00000345990 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
CSNK1G3-201ENST00000345990 KDM5DQ9BY66 1539 aa17.69■□□□□ 0.42
CSNK1G3-201ENST00000345990 LAS1LQ9Y4W2 734 aaKnown RBP17.69■□□□□ 0.42
CSNK1G3-201ENST00000345990 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
CSNK1G3-201ENST00000345990 PLXNC1O60486 1568 aa17.69■□□□□ 0.42
CSNK1G3-201ENST00000345990 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
CSNK1G3-201ENST00000345990 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
CSNK1G3-201ENST00000345990 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
CSNK1G3-201ENST00000345990 GOLGA2Q08379 1002 aa17.67■□□□□ 0.42
CSNK1G3-201ENST00000345990 DIAPH1O60610 1272 aaKnown RBP17.67■□□□□ 0.42
CSNK1G3-201ENST00000345990 PUS7Q96PZ0 661 aaKnown RBP17.67■□□□□ 0.42
CSNK1G3-201ENST00000345990 RIMS2Q9UQ26 1411 aa17.66■□□□□ 0.42
CSNK1G3-201ENST00000345990 IPO8O15397 1037 aaKnown RBP17.66■□□□□ 0.42
CSNK1G3-201ENST00000345990 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
CSNK1G3-201ENST00000345990 CEBPAP49715 358 aaPredicted RBP17.65■□□□□ 0.42
CSNK1G3-201ENST00000345990 EIF5BO60841 1220 aaKnown RBP17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 UHRF1BP1Q6BDS2 1440 aa17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 SUPT16HQ9Y5B9 1047 aaKnown RBP17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 DNAJC5Q9H3Z4 198 aa17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 A0A0G2JS52 829 aa17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
CSNK1G3-201ENST00000345990 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
CSNK1G3-201ENST00000345990 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
CSNK1G3-201ENST00000345990 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
CSNK1G3-201ENST00000345990 ZBED9Q6R2W3 1325 aa17.61■□□□□ 0.41
CSNK1G3-201ENST00000345990 YEATS2Q9ULM3 1422 aa17.6■□□□□ 0.41
CSNK1G3-201ENST00000345990 PPP4R2Q9NY27 417 aa17.6■□□□□ 0.41
CSNK1G3-201ENST00000345990 SLC12A5Q9H2X9 1139 aa17.59■□□□□ 0.41
CSNK1G3-201ENST00000345990 AMOTL2Q9Y2J4 779 aa17.59■□□□□ 0.41
CSNK1G3-201ENST00000345990 CABP1Q9NZU7 370 aa17.59■□□□□ 0.41
CSNK1G3-201ENST00000345990 NUDT16Q96DE0 195 aaKnown RBP17.58■□□□□ 0.41
CSNK1G3-201ENST00000345990 NLRP6P59044 892 aa17.58■□□□□ 0.4
CSNK1G3-201ENST00000345990 RUNDC1Q96C34 613 aa17.58■□□□□ 0.4
CSNK1G3-201ENST00000345990 NSD2O96028 1365 aa17.58■□□□□ 0.4
CSNK1G3-201ENST00000345990 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
CSNK1G3-201ENST00000345990 RCAN3Q9UKA8 241 aa17.57■□□□□ 0.4
CSNK1G3-201ENST00000345990 E9PSI1 815 aa17.57■□□□□ 0.4
CSNK1G3-201ENST00000345990 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
CSNK1G3-201ENST00000345990 WASLO00401 505 aaPredicted RBP17.57■□□□□ 0.4
CSNK1G3-201ENST00000345990 PPP2R1AP30153 589 aa17.56■□□□□ 0.4
CSNK1G3-201ENST00000345990 NPATQ14207 1427 aa17.56■□□□□ 0.4
CSNK1G3-201ENST00000345990 ANP32AP39687 249 aaKnown RBP17.55■□□□□ 0.4
CSNK1G3-201ENST00000345990 GLI2P10070 1586 aa17.55■□□□□ 0.4
CSNK1G3-201ENST00000345990 TBX22Q9Y458 520 aa17.55■□□□□ 0.4
CSNK1G3-201ENST00000345990 HDAC5Q9UQL6 1122 aa17.55■□□□□ 0.4
CSNK1G3-201ENST00000345990 FRAT1Q92837 279 aaPredicted RBP17.54■□□□□ 0.4
CSNK1G3-201ENST00000345990 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
CSNK1G3-201ENST00000345990 ARHGAP31Q2M1Z3 1444 aa17.53■□□□□ 0.4
CSNK1G3-201ENST00000345990 MYT1Q01538 1121 aa17.52■□□□□ 0.4
CSNK1G3-201ENST00000345990 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
CSNK1G3-201ENST00000345990 CDC42BPBQ9Y5S2 1711 aa17.52■□□□□ 0.4
CSNK1G3-201ENST00000345990 C1orf141Q5JVX7 400 aa17.52■□□□□ 0.4
CSNK1G3-201ENST00000345990 TRPM2O94759 1503 aa17.52■□□□□ 0.4
CSNK1G3-201ENST00000345990 MTHFSP49914 203 aa17.52■□□□□ 0.39
CSNK1G3-201ENST00000345990 PTPRTO14522 1441 aa17.52■□□□□ 0.39
CSNK1G3-201ENST00000345990 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
CSNK1G3-201ENST00000345990 LTV1Q96GA3 475 aaPredicted RBP17.51■□□□□ 0.39
CSNK1G3-201ENST00000345990 EVA1CP58658 441 aa17.51■□□□□ 0.39
CSNK1G3-201ENST00000345990 CROCC2H7BZ55 1655 aa17.51■□□□□ 0.39
CSNK1G3-201ENST00000345990 NSD3Q9BZ95 1437 aa17.5■□□□□ 0.39
CSNK1G3-201ENST00000345990 LRPPRCP42704 1394 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms