RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
MCPH1-201ENST00000344683 FAM107BQ9H098 131 aa10.08□□□□□ -0.8
MCPH1-201ENST00000344683 SRPK2P78362 688 aaKnown RBP10.08□□□□□ -0.8
MCPH1-201ENST00000344683 SEPT7Q16181 437 aaKnown RBP10.08□□□□□ -0.8
MCPH1-201ENST00000344683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■■■ 86.9
MCPH1-201ENST00000344683 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
MCPH1-201ENST00000344683 CHMP3Q9Y3E7 222 aa10.07□□□□□ -0.8
MCPH1-201ENST00000344683 DCAF11Q8TEB1 546 aa10.07□□□□□ -0.8
MCPH1-201ENST00000344683 FBXO3Q9UK99 471 aa10.07□□□□□ -0.8
MCPH1-201ENST00000344683 MYO15BQ96JP2 1530 aa10.06□□□□□ -0.8
MCPH1-201ENST00000344683 EZRP15311 586 aaKnown RBP10.06□□□□□ -0.8
MCPH1-201ENST00000344683 KIF15Q9NS87 1388 aa10.06□□□□□ -0.8
MCPH1-201ENST00000344683 MBD3O95983 291 aa10.06□□□□□ -0.8
MCPH1-201ENST00000344683 U2AF1L5P0DN76 240 aaPredicted RBP10.06□□□□□ -0.8
MCPH1-201ENST00000344683 U2AF1Q01081 240 aaKnown RBP eCLIP10.06□□□□□ -0.8
MCPH1-201ENST00000344683 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
MCPH1-201ENST00000344683 RILPL2Q969X0 211 aa10.06□□□□□ -0.8
MCPH1-201ENST00000344683 LMOD2Q6P5Q4 547 aa10.05□□□□□ -0.8
MCPH1-201ENST00000344683 LUC7LQ9NQ29 371 aaKnown RBP10.05□□□□□ -0.8
MCPH1-201ENST00000344683 ARHGAP35Q9NRY4 1499 aa10.05□□□□□ -0.8
MCPH1-201ENST00000344683 CALCOCO1Q9P1Z2 691 aa10.05□□□□□ -0.8
MCPH1-201ENST00000344683 AAMPQ13685 434 aa10.05□□□□□ -0.8
MCPH1-201ENST00000344683 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.05□□□□□ -0.8
MCPH1-201ENST00000344683 SIN3AQ96ST3 1273 aa10.05□□□□□ -0.8
MCPH1-201ENST00000344683 HSPA5P11021 654 aaKnown RBP10.04□□□□□ -0.8
MCPH1-201ENST00000344683 TSPY26PQ9H489 355 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 ANKRD45Q5TZF3 282 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 SLC26A8Q96RN1 970 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
MCPH1-201ENST00000344683 SMC3Q9UQE7 1217 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 ZBED9Q6R2W3 1325 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 GBP2P32456 591 aaPredicted RBP10.04□□□□□ -0.8
MCPH1-201ENST00000344683 FILIP1LQ4L180 1135 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 KRI1Q8N9T8 703 aaKnown RBP10.04□□□□□ -0.8
MCPH1-201ENST00000344683 TOMM22Q9NS69 142 aa10.04□□□□□ -0.8
MCPH1-201ENST00000344683 NFKBIBQ15653 356 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 INTS3Q68E01 1043 aaKnown RBP10.03□□□□□ -0.8
MCPH1-201ENST00000344683 SAFBQ15424 915 aaKnown RBP eCLIP10.03□□□□□ -0.8
MCPH1-201ENST00000344683 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
MCPH1-201ENST00000344683 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
MCPH1-201ENST00000344683 UQCRHLA0A096LP55 91 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 UQCRHP07919 91 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 PDILTQ8N807 584 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 OFD1O75665 1012 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 CPLX1O14810 134 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 SPATA24Q86W54 205 aa10.03□□□□□ -0.8
MCPH1-201ENST00000344683 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.8
MCPH1-201ENST00000344683 NLRP13Q86W25 1043 aa10.02□□□□□ -0.8
MCPH1-201ENST00000344683 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
MCPH1-201ENST00000344683 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
MCPH1-201ENST00000344683 TRIM5Q9C035 493 aa10.02□□□□□ -0.81
MCPH1-201ENST00000344683 CHMP7Q8WUX9 453 aaPredicted RBP10.02□□□□□ -0.81
MCPH1-201ENST00000344683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.02□□□□□ -0.81
MCPH1-201ENST00000344683 GOLGA6L10A0A0M3HER8 536 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 G3V3G9 751 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 DCAF8Q5TAQ9 597 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 SLC4A10Q6U841 1118 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 BRMS1Q9HCU9 246 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 MCM3P25205 808 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 CCDC112Q8NEF3 446 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 TRAK2O60296 914 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 TRDNQ13061 729 aa10.01□□□□□ -0.81
MCPH1-201ENST00000344683 E9PSI1 815 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 CCDC146Q8IYE0 955 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 ERICH2A1L162 156 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 RBM33Q96EV2 1170 aaKnown RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 SHTN1A0MZ66 631 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 RBM10P98175 930 aaKnown RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 MICALCLQ6ZW33 695 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 SENP3Q9H4L4 574 aaPredicted RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 ZNHIT6Q9NWK9 470 aaKnown RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 MAGEC2Q9UBF1 373 aaPredicted RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 SLC4A3P48751 1232 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 MCM2P49736 904 aa10□□□□□ -0.81
MCPH1-201ENST00000344683 ANO8Q9HCE9 1232 aaPredicted RBP10□□□□□ -0.81
MCPH1-201ENST00000344683 KIF27Q86VH2 1401 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 CENPHQ9H3R5 247 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 ZKSCAN2Q63HK3 967 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 CCDC43Q96MW1 224 aaKnown RBP9.99□□□□□ -0.81
MCPH1-201ENST00000344683 XBP1P17861 261 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 CCDC91Q7Z6B0 441 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 MYBBP1AQ9BQG0 1328 aaKnown RBP9.99□□□□□ -0.81
MCPH1-201ENST00000344683 POLR3GO15318 223 aaPredicted RBP9.99□□□□□ -0.81
MCPH1-201ENST00000344683 NOL10Q9BSC4 688 aaKnown RBP9.99□□□□□ -0.81
MCPH1-201ENST00000344683 SMC2O95347 1197 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 NGEFQ8N5V2 710 aa9.99□□□□□ -0.81
MCPH1-201ENST00000344683 NINLQ9Y2I6 1382 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 KINO60870 393 aaKnown RBP9.98□□□□□ -0.81
MCPH1-201ENST00000344683 GBP3Q9H0R5 595 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 MAP9Q49MG5 647 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 ZFYVE27Q5T4F4 411 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 CCDC181Q5TID7 509 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 PPM1EQ8WY54 764 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 FRAT2O75474 233 aaPredicted RBP9.98□□□□□ -0.81
MCPH1-201ENST00000344683 NF2P35240 595 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 WWC1Q8IX03 1113 aa9.98□□□□□ -0.81
MCPH1-201ENST00000344683 PDCP20941 246 aa9.97□□□□□ -0.81
MCPH1-201ENST00000344683 DACH1Q9UI36 760 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms