RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
VIPAS39-202ENST00000343765 RCAN3Q9UKA8 241 aa19.87■□□□□ 0.77
VIPAS39-202ENST00000343765 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
VIPAS39-202ENST00000343765 EIF3AQ14152 1382 aaKnown RBP19.86■□□□□ 0.77
VIPAS39-202ENST00000343765 RRP1P56182 461 aaKnown RBP19.85■□□□□ 0.77
VIPAS39-202ENST00000343765 EFCAB6Q5THR3 1501 aa19.85■□□□□ 0.77
VIPAS39-202ENST00000343765 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
VIPAS39-202ENST00000343765 PPP2R1AP30153 589 aa19.84■□□□□ 0.77
VIPAS39-202ENST00000343765 ADAMTS8Q9UP79 889 aa19.84■□□□□ 0.77
VIPAS39-202ENST00000343765 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
VIPAS39-202ENST00000343765 MSH5O43196 834 aa19.82■□□□□ 0.76
VIPAS39-202ENST00000343765 PDE3BQ13370 1112 aa19.82■□□□□ 0.76
VIPAS39-202ENST00000343765 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
VIPAS39-202ENST00000343765 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
VIPAS39-202ENST00000343765 WDR43Q15061 677 aaKnown RBP eCLIP19.8■□□□□ 0.76
VIPAS39-202ENST00000343765 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
VIPAS39-202ENST00000343765 MAP3K4Q9Y6R4 1608 aa19.8■□□□□ 0.76
VIPAS39-202ENST00000343765 SYNMO15061 1565 aa19.8■□□□□ 0.76
VIPAS39-202ENST00000343765 EXOC6Q8TAG9 804 aa19.8■□□□□ 0.76
VIPAS39-202ENST00000343765 RAPGEF3O95398 923 aa19.79■□□□□ 0.76
VIPAS39-202ENST00000343765 CFAP65Q6ZU64 1925 aaKnown RBP19.79■□□□□ 0.76
VIPAS39-202ENST00000343765 MROH2AA6NES4 1674 aa19.79■□□□□ 0.76
VIPAS39-202ENST00000343765 NOS1P29475 1434 aa19.79■□□□□ 0.76
VIPAS39-202ENST00000343765 KIF1BO60333 1816 aa19.79■□□□□ 0.76
VIPAS39-202ENST00000343765 MYOM2P54296 1465 aa19.78■□□□□ 0.76
VIPAS39-202ENST00000343765 FANCIQ9NVI1 1328 aa19.78■□□□□ 0.76
VIPAS39-202ENST00000343765 ASXL1Q8IXJ9 1541 aa19.77■□□□□ 0.76
VIPAS39-202ENST00000343765 PLIN1O60240 522 aa19.77■□□□□ 0.75
VIPAS39-202ENST00000343765 NPATQ14207 1427 aa19.77■□□□□ 0.75
VIPAS39-202ENST00000343765 TRAK1Q9UPV9 953 aa19.76■□□□□ 0.75
VIPAS39-202ENST00000343765 FRMPD1Q5SYB0 1578 aa19.75■□□□□ 0.75
VIPAS39-202ENST00000343765 MYOM1P52179 1685 aa19.75■□□□□ 0.75
VIPAS39-202ENST00000343765 KIAA1210Q9ULL0 1709 aa19.75■□□□□ 0.75
VIPAS39-202ENST00000343765 NUTM2DQ5VT03 806 aaPredicted RBP19.75■□□□□ 0.75
VIPAS39-202ENST00000343765 ERVK-7P63135 1459 aa19.75■□□□□ 0.75
VIPAS39-202ENST00000343765 LMTK2Q8IWU2 1503 aa19.74■□□□□ 0.75
VIPAS39-202ENST00000343765 KDM5AP29375 1690 aaKnown RBP19.74■□□□□ 0.75
VIPAS39-202ENST00000343765 NEURL4Q96JN8 1562 aa19.74■□□□□ 0.75
VIPAS39-202ENST00000343765 TMEM132EQ6IEE7 984 aa19.73■□□□□ 0.75
VIPAS39-202ENST00000343765 HECW2Q9P2P5 1572 aa19.72■□□□□ 0.75
VIPAS39-202ENST00000343765 MLH3Q9UHC1 1453 aa19.72■□□□□ 0.75
VIPAS39-202ENST00000343765 CCDC146Q8IYE0 955 aa19.72■□□□□ 0.75
VIPAS39-202ENST00000343765 INSRP06213 1382 aa19.72■□□□□ 0.75
VIPAS39-202ENST00000343765 ADGRB3O60242 1522 aa19.71■□□□□ 0.75
VIPAS39-202ENST00000343765 CFAP74Q9C0B2 1584 aa19.71■□□□□ 0.75
VIPAS39-202ENST00000343765 CARD14Q9BXL6 1004 aa19.71■□□□□ 0.75
VIPAS39-202ENST00000343765 ZMYM4Q5VZL5 1548 aa19.71■□□□□ 0.75
VIPAS39-202ENST00000343765 CENPJQ9HC77 1338 aaPredicted RBP19.71■□□□□ 0.75
VIPAS39-202ENST00000343765 PLEKHH1Q9ULM0 1364 aa19.7■□□□□ 0.74
VIPAS39-202ENST00000343765 IFT172Q9UG01 1749 aa19.7■□□□□ 0.74
VIPAS39-202ENST00000343765 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
VIPAS39-202ENST00000343765 ERICH6Q7L0X2 663 aa19.68■□□□□ 0.74
VIPAS39-202ENST00000343765 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
VIPAS39-202ENST00000343765 PIK3C2GO75747 1445 aa19.67■□□□□ 0.74
VIPAS39-202ENST00000343765 SLC24A1O60721 1099 aa19.66■□□□□ 0.74
VIPAS39-202ENST00000343765 ABCC3O15438 1527 aa19.66■□□□□ 0.74
VIPAS39-202ENST00000343765 NPC1L1Q9UHC9 1359 aa19.66■□□□□ 0.74
VIPAS39-202ENST00000343765 C14orf93Q9H972 538 aaKnown RBP19.65■□□□□ 0.74
VIPAS39-202ENST00000343765 TNNT2P45379 298 aaPredicted RBP19.65■□□□□ 0.74
VIPAS39-202ENST00000343765 CRBNQ96SW2 442 aa19.64■□□□□ 0.73
VIPAS39-202ENST00000343765 SLC12A5Q9H2X9 1139 aa19.63■□□□□ 0.73
VIPAS39-202ENST00000343765 APAF1O14727 1248 aa19.62■□□□□ 0.73
VIPAS39-202ENST00000343765 GOLGA2Q08379 1002 aa19.62■□□□□ 0.73
VIPAS39-202ENST00000343765 C20orf194Q5TEA3 1177 aa19.62■□□□□ 0.73
VIPAS39-202ENST00000343765 DUSP27Q5VZP5 1158 aa19.62■□□□□ 0.73
VIPAS39-202ENST00000343765 NEO1Q92859 1461 aa19.61■□□□□ 0.73
VIPAS39-202ENST00000343765 PPLO60437 1756 aa19.61■□□□□ 0.73
VIPAS39-202ENST00000343765 SBNO2Q9Y2G9 1366 aa19.6■□□□□ 0.73
VIPAS39-202ENST00000343765 NSD3Q9BZ95 1437 aa19.6■□□□□ 0.73
VIPAS39-202ENST00000343765 SAFB2Q14151 953 aaKnown RBP eCLIP19.6■□□□□ 0.73
VIPAS39-202ENST00000343765 SETBP1Q9Y6X0 1596 aa19.59■□□□□ 0.73
VIPAS39-202ENST00000343765 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
VIPAS39-202ENST00000343765 ZNF521Q96K83 1311 aa19.59■□□□□ 0.73
VIPAS39-202ENST00000343765 MYO3AQ8NEV4 1616 aa19.59■□□□□ 0.73
VIPAS39-202ENST00000343765 RPGRIP1LQ68CZ1 1315 aa19.59■□□□□ 0.73
VIPAS39-202ENST00000343765 SIGLEC1Q9BZZ2 1709 aa19.58■□□□□ 0.73
VIPAS39-202ENST00000343765 YEATS2Q9ULM3 1422 aa19.58■□□□□ 0.73
VIPAS39-202ENST00000343765 ADGRB1O14514 1584 aa19.58■□□□□ 0.73
VIPAS39-202ENST00000343765 DIP2CQ9Y2E4 1556 aa19.58■□□□□ 0.73
VIPAS39-202ENST00000343765 MORC1Q86VD1 984 aa19.58■□□□□ 0.72
VIPAS39-202ENST00000343765 IDI1Q13907 227 aa19.57■□□□□ 0.72
VIPAS39-202ENST00000343765 QRICH2Q9H0J4 1663 aa19.57■□□□□ 0.72
VIPAS39-202ENST00000343765 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
VIPAS39-202ENST00000343765 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
VIPAS39-202ENST00000343765 SKAP1Q86WV1 359 aa19.55■□□□□ 0.72
VIPAS39-202ENST00000343765 SLFN5Q08AF3 891 aa19.55■□□□□ 0.72
VIPAS39-202ENST00000343765 STK26Q9P289 416 aa19.55■□□□□ 0.72
VIPAS39-202ENST00000343765 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
VIPAS39-202ENST00000343765 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
VIPAS39-202ENST00000343765 GLI2P10070 1586 aa19.52■□□□□ 0.71
VIPAS39-202ENST00000343765 ANP32AP39687 249 aaKnown RBP19.51■□□□□ 0.71
VIPAS39-202ENST00000343765 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
VIPAS39-202ENST00000343765 ZC3H13Q5T200 1668 aaKnown RBP19.5■□□□□ 0.71
VIPAS39-202ENST00000343765 NEUROD2Q15784 382 aa19.5■□□□□ 0.71
VIPAS39-202ENST00000343765 RICTORQ6R327 1708 aa19.5■□□□□ 0.71
VIPAS39-202ENST00000343765 EVC2Q86UK5 1308 aa19.5■□□□□ 0.71
VIPAS39-202ENST00000343765 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
VIPAS39-202ENST00000343765 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
VIPAS39-202ENST00000343765 PIK3C2BO00750 1634 aa19.49■□□□□ 0.71
VIPAS39-202ENST00000343765 RRP7AQ9Y3A4 280 aaKnown RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms