RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MYH4Q9Y623 1939 aa7.44□□□□□ -1.22
VCAN-203ENST00000343200 FYB1O15117 783 aa7.44□□□□□ -1.22
VCAN-203ENST00000343200 RBM33Q96EV2 1170 aaKnown RBP7.44□□□□□ -1.22
VCAN-203ENST00000343200 BRPF3Q9ULD4 1205 aa7.44□□□□□ -1.22
VCAN-203ENST00000343200 CHMP3Q9Y3E7 222 aa7.44□□□□□ -1.22
VCAN-203ENST00000343200 POLR3GO15318 223 aaPredicted RBP7.44□□□□□ -1.22
VCAN-203ENST00000343200 NF2P35240 595 aa7.44□□□□□ -1.22
VCAN-203ENST00000343200 RBM10P98175 930 aaKnown RBP7.44□□□□□ -1.22
VCAN-203ENST00000343200 REC8O95072 547 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 NAP1L1P55209 391 aaKnown RBP7.43□□□□□ -1.22
VCAN-203ENST00000343200 SASS6Q6UVJ0 657 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 EIF3AQ14152 1382 aaKnown RBP7.43□□□□□ -1.22
VCAN-203ENST00000343200 CT47A1Q5JQC4 288 aaPredicted RBP7.43□□□□□ -1.22
VCAN-203ENST00000343200 SHTN1A0MZ66 631 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 FAM114A1Q8IWE2 563 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 MYO9BQ13459 2157 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 CCDC146Q8IYE0 955 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 CEP162Q5TB80 1403 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 RBM25P49756 843 aaKnown RBP7.43□□□□□ -1.22
VCAN-203ENST00000343200 TXLNBQ8N3L3 684 aa7.43□□□□□ -1.22
VCAN-203ENST00000343200 FBXO3Q9UK99 471 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 NUCB2P80303 420 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 ODF2Q5BJF6 829 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 SEPT7Q16181 437 aaKnown RBP7.42□□□□□ -1.22
VCAN-203ENST00000343200 CNTRLQ7Z7A1 2325 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 GBP2P32456 591 aaPredicted RBP7.42□□□□□ -1.22
VCAN-203ENST00000343200 CCDC112Q8NEF3 446 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 IPO4Q8TEX9 1081 aaKnown RBP7.42□□□□□ -1.22
VCAN-203ENST00000343200 STK31Q9BXU1 1019 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 NEUROD2Q15784 382 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 MICALCLQ6ZW33 695 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 E9PSI1 815 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 NPHP1O15259 732 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 TDO2P48775 406 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 CHMP4AQ9BY43 222 aa7.42□□□□□ -1.22
VCAN-203ENST00000343200 CCDC91Q7Z6B0 441 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 PCMTD1Q96MG8 357 aaPredicted RBP7.41□□□□□ -1.22
VCAN-203ENST00000343200 SUDS3Q9H7L9 328 aaPredicted RBP7.41□□□□□ -1.22
VCAN-203ENST00000343200 MAP9Q49MG5 647 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 PDE4AP27815 886 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 FEZ1Q99689 392 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 MCM3P25205 808 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 NFKBIBQ15653 356 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 TICAM2Q86XR7 235 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 CHGAP10645 457 aaKnown RBP7.41□□□□□ -1.22
VCAN-203ENST00000343200 RBM28Q9NW13 759 aaKnown RBP7.41□□□□□ -1.22
VCAN-203ENST00000343200 ZCCHC6Q5VYS8 1495 aaKnown RBP7.41□□□□□ -1.22
VCAN-203ENST00000343200 TNNT1P13805 278 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 EPS15P42566 896 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
VCAN-203ENST00000343200 LIG1P18858 919 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 TMCO3Q6UWJ1 677 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 CEP63Q96MT8 703 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 MYH14Q7Z406 1995 aaKnown RBP7.4□□□□□ -1.22
VCAN-203ENST00000343200 FOXD4L1Q9NU39 408 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 MNAT1P51948 309 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 HSP90AB2PQ58FF8 381 aa7.4□□□□□ -1.22
VCAN-203ENST00000343200 MBD3O95983 291 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 SARNPP82979 210 aaKnown RBP7.4□□□□□ -1.23
VCAN-203ENST00000343200 CHMP5Q9NZZ3 219 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 SMARCE1Q969G3 411 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 HDAC5Q9UQL6 1122 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 A0A0G2JS52 829 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 WWC1Q8IX03 1113 aa7.4□□□□□ -1.23
VCAN-203ENST00000343200 KIF2AO00139 706 aaPredicted RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 SKIDA1Q1XH10 827 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 ZBED9Q6R2W3 1325 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 FOXD4L5Q5VV16 416 aaPredicted RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 FOXD4L4Q8WXT5 416 aaPredicted RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 OLFM4Q6UX06 510 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 FAM184AQ8NB25 1140 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 PPM1EQ8WY54 764 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 MRVI1Q9Y6F6 885 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 TMX4Q9H1E5 349 aaPredicted RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 LUC7LQ9NQ29 371 aaKnown RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 ZHX1Q9UKY1 873 aaPredicted RBP7.39□□□□□ -1.23
VCAN-203ENST00000343200 TRIM5Q9C035 493 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 CARD11Q9BXL7 1154 aa7.39□□□□□ -1.23
VCAN-203ENST00000343200 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 VIRMAQ69YN4 1812 aaKnown RBP7.38□□□□□ -1.23
VCAN-203ENST00000343200 MPHOSPH10O00566 681 aaKnown RBP7.38□□□□□ -1.23
VCAN-203ENST00000343200 IVLP07476 585 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 TSPY26PQ9H489 355 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 ROCK2O75116 1388 aaKnown RBP7.38□□□□□ -1.23
VCAN-203ENST00000343200 KIF3BO15066 747 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 MCTP1Q6DN14 999 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 SEPT11Q9NVA2 429 aaKnown RBP7.38□□□□□ -1.23
VCAN-203ENST00000343200 BICD2Q8TD16 824 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 ESPNB1AK53 854 aa7.38□□□□□ -1.23
VCAN-203ENST00000343200 CCDC175P0C221 793 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 BRD2P25440 801 aaKnown RBP7.37□□□□□ -1.23
VCAN-203ENST00000343200 PDE3BQ13370 1112 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 DNAAF4Q8WXU2 420 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 NOL8Q76FK4 1167 aaKnown RBP7.37□□□□□ -1.23
VCAN-203ENST00000343200 CCDC47Q96A33 483 aaKnown RBP7.37□□□□□ -1.23
VCAN-203ENST00000343200 MIPOL1Q8TD10 442 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 CCDC73Q6ZRK6 1079 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 PSMD1Q99460 953 aa7.37□□□□□ -1.23
VCAN-203ENST00000343200 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms