RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TSR2Q969E8 191 aaKnown RBP15.45■□□□□ 0.06
SSX2IP-201ENST00000342203 EIF3AQ14152 1382 aaKnown RBP15.45■□□□□ 0.06
SSX2IP-201ENST00000342203 SLFN5Q08AF3 891 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 C8orf34Q49A92 452 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 MIA2Q96PC5 1412 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 ANKRD50Q9ULJ7 1429 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 FYCO1Q9BQS8 1478 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 ESF1Q9H501 851 aaKnown RBP15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 CUX1P39880 1505 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 KIF3BO15066 747 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 CCDC173Q0VFZ6 552 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 PRDM10Q9NQV6 1147 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 ANKRD30BQ9BXX2 1392 aa15.44■□□□□ 0.06
SSX2IP-201ENST00000342203 CSPP1Q1MSJ5 1256 aa15.43■□□□□ 0.06
SSX2IP-201ENST00000342203 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
SSX2IP-201ENST00000342203 RILPL2Q969X0 211 aa15.43■□□□□ 0.06
SSX2IP-201ENST00000342203 C1orf115Q9H7X2 142 aa15.43■□□□□ 0.06
SSX2IP-201ENST00000342203 DUSP27Q5VZP5 1158 aa15.42■□□□□ 0.06
SSX2IP-201ENST00000342203 NUCB2P80303 420 aa15.42■□□□□ 0.06
SSX2IP-201ENST00000342203 AQRO60306 1485 aaKnown RBP eCLIP15.42■□□□□ 0.061e-6■■■□□ 15
SSX2IP-201ENST00000342203 ZNF592Q92610 1267 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 UQCRHLA0A096LP55 91 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 UQCRHP07919 91 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 MTHFSP49914 203 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 RIPK4P57078 832 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 PTPRKQ15262 1439 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 PHF14O94880 888 aa15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 EXOSC9Q06265 439 aaKnown RBP15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
SSX2IP-201ENST00000342203 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.4■□□□□ 0.063e-6■□□□□ 10.1
SSX2IP-201ENST00000342203 SEC24BO95487 1268 aa15.4■□□□□ 0.06
SSX2IP-201ENST00000342203 MAP7D2Q96T17 732 aa15.4■□□□□ 0.06
SSX2IP-201ENST00000342203 MAP3K1Q13233 1512 aa15.4■□□□□ 0.06
SSX2IP-201ENST00000342203 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
SSX2IP-201ENST00000342203 GOLGA6L6A8MZA4 724 aa15.4■□□□□ 0.06
SSX2IP-201ENST00000342203 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.39■□□□□ 0.05
SSX2IP-201ENST00000342203 NRDCO43847 1150 aa15.39■□□□□ 0.05
SSX2IP-201ENST00000342203 TNNT3P45378 269 aaPredicted RBP15.39■□□□□ 0.05
SSX2IP-201ENST00000342203 ZSCAN30Q86W11 494 aa15.39■□□□□ 0.05
SSX2IP-201ENST00000342203 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
SSX2IP-201ENST00000342203 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
SSX2IP-201ENST00000342203 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
SSX2IP-201ENST00000342203 CLCN1P35523 988 aa15.38■□□□□ 0.05
SSX2IP-201ENST00000342203 KANK1Q14678 1352 aa15.38■□□□□ 0.05
SSX2IP-201ENST00000342203 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
SSX2IP-201ENST00000342203 ANO2Q9NQ90 1003 aa15.36■□□□□ 0.05
SSX2IP-201ENST00000342203 HMMRO75330 724 aa15.36■□□□□ 0.05
SSX2IP-201ENST00000342203 ISY1Q9ULR0 285 aaKnown RBP15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 TNPO1Q92973 898 aaKnown RBP15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 JPH4Q96JJ6 628 aa15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 CCDC39Q9UFE4 941 aa15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 REC8O95072 547 aa15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 WWC1Q8IX03 1113 aa15.35■□□□□ 0.05
SSX2IP-201ENST00000342203 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 CDC45O75419 566 aa15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 PDCL3Q9H2J4 239 aa15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 ZHX1Q9UKY1 873 aaPredicted RBP15.34■□□□□ 0.05
SSX2IP-201ENST00000342203 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
SSX2IP-201ENST00000342203 GGNBP2Q9H3C7 697 aa15.33■□□□□ 0.05
SSX2IP-201ENST00000342203 SSFA2P28290 1259 aa15.33■□□□□ 0.04
SSX2IP-201ENST00000342203 TBC1D32Q96NH3 1257 aa15.33■□□□□ 0.04
SSX2IP-201ENST00000342203 AAMPQ13685 434 aa15.33■□□□□ 0.04
SSX2IP-201ENST00000342203 NEK4P51957 841 aa15.33■□□□□ 0.04
SSX2IP-201ENST00000342203 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
SSX2IP-201ENST00000342203 HAP1P54257 671 aaPredicted RBP15.32■□□□□ 0.04
SSX2IP-201ENST00000342203 PDS5BQ9NTI5 1447 aa15.32■□□□□ 0.04
SSX2IP-201ENST00000342203 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
SSX2IP-201ENST00000342203 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
SSX2IP-201ENST00000342203 MTERF4Q7Z6M4 381 aaKnown RBP15.32■□□□□ 0.04
SSX2IP-201ENST00000342203 CARMIL2Q6F5E8 1435 aa15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 HMOX1P09601 288 aa15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 INTS3Q68E01 1043 aaKnown RBP15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 TERF2IPQ9NYB0 399 aa15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 RSPH4AQ5TD94 716 aa15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 RNF123Q5XPI4 1314 aa15.31■□□□□ 0.04
SSX2IP-201ENST00000342203 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 MAPK8IP2Q13387 824 aaPredicted RBP15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 SPAG9O60271 1321 aaKnown RBP15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 SYCE3A1L190 88 aa15.3■□□□□ 0.04
SSX2IP-201ENST00000342203 SPC24Q8NBT2 197 aa15.29■□□□□ 0.04
SSX2IP-201ENST00000342203 VPS37CA5D8V6 355 aaPredicted RBP15.29■□□□□ 0.04
SSX2IP-201ENST00000342203 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
SSX2IP-201ENST00000342203 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 RPRD2Q5VT52 1461 aaKnown RBP15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 CCDC27Q2M243 656 aa15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 CIZ1Q9ULV3 898 aaPredicted RBP15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 LRPPRCP42704 1394 aaKnown RBP15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 CBX1P83916 185 aa15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 CHD1LQ86WJ1 897 aa15.28■□□□□ 0.04
SSX2IP-201ENST00000342203 DAPK1P53355 1430 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms