RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
COL11A2-201ENST00000341947 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
COL11A2-201ENST00000341947 SYTL4Q96C24 671 aaPredicted RBP18.67■□□□□ 0.58
COL11A2-201ENST00000341947 IFIT2P09913 472 aaKnown RBP18.66■□□□□ 0.58
COL11A2-201ENST00000341947 PSME1Q06323 249 aa18.66■□□□□ 0.58
COL11A2-201ENST00000341947 APPP05067 770 aa18.66■□□□□ 0.58
COL11A2-201ENST00000341947 DHX16O60231 1041 aaKnown RBP18.66■□□□□ 0.58
COL11A2-201ENST00000341947 ZKSCAN1P17029 563 aaPredicted RBP18.65■□□□□ 0.58
COL11A2-201ENST00000341947 CCDC70Q6NSX1 233 aa18.64■□□□□ 0.58
COL11A2-201ENST00000341947 WWC1Q8IX03 1113 aa18.64■□□□□ 0.58
COL11A2-201ENST00000341947 ANO2Q9NQ90 1003 aa18.64■□□□□ 0.58
COL11A2-201ENST00000341947 DIAPH1O60610 1272 aaKnown RBP18.64■□□□□ 0.57
COL11A2-201ENST00000341947 FAM161AQ3B820 660 aa18.63■□□□□ 0.57
COL11A2-201ENST00000341947 CADPSQ9ULU8 1353 aa18.63■□□□□ 0.57
COL11A2-201ENST00000341947 PCMTD1Q96MG8 357 aaPredicted RBP18.63■□□□□ 0.57
COL11A2-201ENST00000341947 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
COL11A2-201ENST00000341947 CPLX1O14810 134 aa18.63■□□□□ 0.57
COL11A2-201ENST00000341947 ROCK1Q13464 1354 aa18.63■□□□□ 0.57
COL11A2-201ENST00000341947 SKOR2Q2VWA4 1001 aaPredicted RBP18.62■□□□□ 0.57
COL11A2-201ENST00000341947 TRDNQ13061 729 aa18.62■□□□□ 0.57
COL11A2-201ENST00000341947 REC8O95072 547 aa18.62■□□□□ 0.57
COL11A2-201ENST00000341947 CWC22Q9HCG8 908 aaKnown RBP18.62■□□□□ 0.57
COL11A2-201ENST00000341947 PTPRGP23470 1445 aa18.61■□□□□ 0.57
COL11A2-201ENST00000341947 FOXD4L6Q3SYB3 417 aaPredicted RBP18.61■□□□□ 0.57
COL11A2-201ENST00000341947 FOXD4L3Q6VB84 417 aaPredicted RBP18.61■□□□□ 0.57
COL11A2-201ENST00000341947 CCAR2Q8N163 923 aaKnown RBP18.61■□□□□ 0.57
COL11A2-201ENST00000341947 API5Q9BZZ5 524 aaKnown RBP18.61■□□□□ 0.57
COL11A2-201ENST00000341947 G3BP1Q13283 466 aaKnown RBP eCLIP18.61■□□□□ 0.57
COL11A2-201ENST00000341947 ANKRD20A12PQ8NF67 263 aa18.61■□□□□ 0.57
COL11A2-201ENST00000341947 NECTIN2Q92692 538 aa18.61■□□□□ 0.57
COL11A2-201ENST00000341947 DDX19BQ9UMR2 479 aa18.6■□□□□ 0.57
COL11A2-201ENST00000341947 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
COL11A2-201ENST00000341947 ERICH2A1L162 156 aa18.6■□□□□ 0.57
COL11A2-201ENST00000341947 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
COL11A2-201ENST00000341947 NFXL1Q6ZNB6 911 aa18.59■□□□□ 0.57
COL11A2-201ENST00000341947 HOOK1Q9UJC3 728 aaKnown RBP18.59■□□□□ 0.57
COL11A2-201ENST00000341947 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
COL11A2-201ENST00000341947 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
COL11A2-201ENST00000341947 KRI1Q8N9T8 703 aaKnown RBP18.59■□□□□ 0.57
COL11A2-201ENST00000341947 IPO7O95373 1038 aaKnown RBP18.58■□□□□ 0.57
COL11A2-201ENST00000341947 COG6Q9Y2V7 657 aa18.58■□□□□ 0.57
COL11A2-201ENST00000341947 CCDC43Q96MW1 224 aaKnown RBP18.58■□□□□ 0.56
COL11A2-201ENST00000341947 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.56
COL11A2-201ENST00000341947 PLIN1O60240 522 aa18.58■□□□□ 0.56
COL11A2-201ENST00000341947 USP47Q96K76 1375 aa18.57■□□□□ 0.56
COL11A2-201ENST00000341947 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
COL11A2-201ENST00000341947 RIPK4P57078 832 aa18.57■□□□□ 0.56
COL11A2-201ENST00000341947 FKBP5Q13451 457 aaPredicted RBP18.57■□□□□ 0.56
COL11A2-201ENST00000341947 CNKSR2Q8WXI2 1034 aa18.57■□□□□ 0.56
COL11A2-201ENST00000341947 AEBP2Q6ZN18 517 aaPredicted RBP18.57■□□□□ 0.56
COL11A2-201ENST00000341947 CRBNQ96SW2 442 aa18.57■□□□□ 0.56
COL11A2-201ENST00000341947 SETQ01105 290 aaPredicted RBP18.55■□□□□ 0.56
COL11A2-201ENST00000341947 GPS2Q13227 327 aa18.55■□□□□ 0.56
COL11A2-201ENST00000341947 RAPGEF4Q8WZA2 1011 aa18.55■□□□□ 0.56
COL11A2-201ENST00000341947 APAF1O14727 1248 aa18.55■□□□□ 0.56
COL11A2-201ENST00000341947 ATF3P18847 181 aa18.54■□□□□ 0.56
COL11A2-201ENST00000341947 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
COL11A2-201ENST00000341947 HSP90AB4PQ58FF6 505 aa18.54■□□□□ 0.56
COL11A2-201ENST00000341947 PDE4AP27815 886 aa18.53■□□□□ 0.56
COL11A2-201ENST00000341947 DZIP1LQ8IYY4 767 aaKnown RBP18.53■□□□□ 0.56
COL11A2-201ENST00000341947 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
COL11A2-201ENST00000341947 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
COL11A2-201ENST00000341947 BICD2Q8TD16 824 aa18.52■□□□□ 0.56
COL11A2-201ENST00000341947 ERC2O15083 957 aa18.51■□□□□ 0.55
COL11A2-201ENST00000341947 TSHZ2Q9NRE2 1034 aa18.51■□□□□ 0.55
COL11A2-201ENST00000341947 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
COL11A2-201ENST00000341947 GNAI1P63096 354 aa18.5■□□□□ 0.55
COL11A2-201ENST00000341947 SAFBQ15424 915 aaKnown RBP eCLIP18.5■□□□□ 0.55
COL11A2-201ENST00000341947 RIC3Q7Z5B4 369 aa18.5■□□□□ 0.55
COL11A2-201ENST00000341947 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
COL11A2-201ENST00000341947 PRKRIP1Q9H875 184 aaPredicted RBP18.49■□□□□ 0.55
COL11A2-201ENST00000341947 SAMD1Q6SPF0 538 aaPredicted RBP18.49■□□□□ 0.55
COL11A2-201ENST00000341947 ZNF592Q92610 1267 aa18.49■□□□□ 0.55
COL11A2-201ENST00000341947 INTS3Q68E01 1043 aaKnown RBP18.49■□□□□ 0.55
COL11A2-201ENST00000341947 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
COL11A2-201ENST00000341947 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
COL11A2-201ENST00000341947 MIA2Q96PC5 1412 aa18.48■□□□□ 0.55
COL11A2-201ENST00000341947 SMC3Q9UQE7 1217 aa18.47■□□□□ 0.55
COL11A2-201ENST00000341947 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
COL11A2-201ENST00000341947 RALYLQ86SE5 291 aaKnown RBP18.47■□□□□ 0.55
COL11A2-201ENST00000341947 NEUROD6Q96NK8 337 aa18.47■□□□□ 0.55
COL11A2-201ENST00000341947 NLRP2Q9NX02 1062 aa18.47■□□□□ 0.55
COL11A2-201ENST00000341947 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.46■□□□□ 0.55
COL11A2-201ENST00000341947 VPS37CA5D8V6 355 aaPredicted RBP18.46■□□□□ 0.55
COL11A2-201ENST00000341947 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
COL11A2-201ENST00000341947 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
COL11A2-201ENST00000341947 WASHC4Q2M389 1173 aa18.46■□□□□ 0.54
COL11A2-201ENST00000341947 FYB1O15117 783 aa18.45■□□□□ 0.54
COL11A2-201ENST00000341947 BRMS1Q9HCU9 246 aa18.45■□□□□ 0.54
COL11A2-201ENST00000341947 WIZO95785 1651 aa18.45■□□□□ 0.54
COL11A2-201ENST00000341947 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
COL11A2-201ENST00000341947 AIMP1Q12904 312 aaKnown RBP18.45■□□□□ 0.54
COL11A2-201ENST00000341947 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
COL11A2-201ENST00000341947 HOMER1Q86YM7 354 aa18.44■□□□□ 0.54
COL11A2-201ENST00000341947 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
COL11A2-201ENST00000341947 FOSBP53539 338 aa18.44■□□□□ 0.54
COL11A2-201ENST00000341947 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
COL11A2-201ENST00000341947 HMOX1P09601 288 aa18.43■□□□□ 0.54
COL11A2-201ENST00000341947 CT47A1Q5JQC4 288 aaPredicted RBP18.43■□□□□ 0.54
COL11A2-201ENST00000341947 CCDC73Q6ZRK6 1079 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms