RNA–Protein interactions for RNA: ENST00000341807.8

COL22A1-202, Transcript of collagen type XXII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL22A1, Length 3,584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1-202ENST00000341807 KANK1Q14678 1352 aa17.04■□□□□ 0.32
COL22A1-202ENST00000341807 KDM5DQ9BY66 1539 aa17.04■□□□□ 0.32
COL22A1-202ENST00000341807 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
COL22A1-202ENST00000341807 GPRASP1Q5JY77 1395 aa17.03■□□□□ 0.32
COL22A1-202ENST00000341807 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
COL22A1-202ENST00000341807 SLKQ9H2G2 1235 aaPredicted RBP17.02■□□□□ 0.32
COL22A1-202ENST00000341807 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
COL22A1-202ENST00000341807 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.32
COL22A1-202ENST00000341807 E9PSI1 815 aa17.02■□□□□ 0.32
COL22A1-202ENST00000341807 TMEM132EQ6IEE7 984 aa17.01■□□□□ 0.31
COL22A1-202ENST00000341807 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
COL22A1-202ENST00000341807 EIF3AQ14152 1382 aaKnown RBP17■□□□□ 0.31
COL22A1-202ENST00000341807 ADCY10Q96PN6 1610 aa17■□□□□ 0.31
COL22A1-202ENST00000341807 SPRYD3Q8NCJ5 442 aa17■□□□□ 0.31
COL22A1-202ENST00000341807 SLC12A5Q9H2X9 1139 aa16.99■□□□□ 0.31
COL22A1-202ENST00000341807 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
COL22A1-202ENST00000341807 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
COL22A1-202ENST00000341807 ADGRF5Q8IZF2 1346 aa16.99■□□□□ 0.31
COL22A1-202ENST00000341807 BLMP54132 1417 aaPredicted RBP16.99■□□□□ 0.31
COL22A1-202ENST00000341807 BRPF3Q9ULD4 1205 aa16.98■□□□□ 0.31
COL22A1-202ENST00000341807 GSE1Q14687 1217 aa16.98■□□□□ 0.31
COL22A1-202ENST00000341807 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
COL22A1-202ENST00000341807 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
COL22A1-202ENST00000341807 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
COL22A1-202ENST00000341807 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
COL22A1-202ENST00000341807 UPF2Q9HAU5 1272 aaKnown RBP16.97■□□□□ 0.31
COL22A1-202ENST00000341807 IGHDP01880 384 aa16.97■□□□□ 0.31
COL22A1-202ENST00000341807 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
COL22A1-202ENST00000341807 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.31
COL22A1-202ENST00000341807 C8orf34Q49A92 452 aa16.95■□□□□ 0.3
COL22A1-202ENST00000341807 CFAP53Q96M91 514 aa16.95■□□□□ 0.3
COL22A1-202ENST00000341807 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
COL22A1-202ENST00000341807 STK26Q9P289 416 aa16.95■□□□□ 0.3
COL22A1-202ENST00000341807 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
COL22A1-202ENST00000341807 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
COL22A1-202ENST00000341807 FTSJ3Q8IY81 847 aaKnown RBP16.94■□□□□ 0.3
COL22A1-202ENST00000341807 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
COL22A1-202ENST00000341807 TRPM1Q7Z4N2 1603 aa16.94■□□□□ 0.3
COL22A1-202ENST00000341807 WWC1Q8IX03 1113 aa16.93■□□□□ 0.3
COL22A1-202ENST00000341807 ZMYM4Q5VZL5 1548 aa16.93■□□□□ 0.3
COL22A1-202ENST00000341807 MTHFSP49914 203 aa16.93■□□□□ 0.3
COL22A1-202ENST00000341807 SCAF11Q99590 1463 aaKnown RBP16.92■□□□□ 0.3
COL22A1-202ENST00000341807 EIF5BO60841 1220 aaKnown RBP16.92■□□□□ 0.3
COL22A1-202ENST00000341807 BECN1Q14457 450 aa16.92■□□□□ 0.3
COL22A1-202ENST00000341807 TNNQ9UQP3 1299 aa16.92■□□□□ 0.3
COL22A1-202ENST00000341807 CGNL1Q0VF96 1302 aa16.92■□□□□ 0.3
COL22A1-202ENST00000341807 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
COL22A1-202ENST00000341807 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
COL22A1-202ENST00000341807 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.91■□□□□ 0.3
COL22A1-202ENST00000341807 DUOX2Q9NRD8 1548 aa16.91■□□□□ 0.3
COL22A1-202ENST00000341807 WDR7Q9Y4E6 1490 aa16.91■□□□□ 0.3
COL22A1-202ENST00000341807 PLCH2O75038 1416 aa16.89■□□□□ 0.29
COL22A1-202ENST00000341807 PRDM15P57071 1507 aaPredicted RBP16.89■□□□□ 0.29
COL22A1-202ENST00000341807 NPM1P06748 294 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL22A1-202ENST00000341807 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
COL22A1-202ENST00000341807 ZNF521Q96K83 1311 aa16.88■□□□□ 0.29
COL22A1-202ENST00000341807 SRPK2P78362 688 aaKnown RBP16.88■□□□□ 0.29
COL22A1-202ENST00000341807 RUNDC1Q96C34 613 aa16.88■□□□□ 0.29
COL22A1-202ENST00000341807 NKTRP30414 1462 aaKnown RBP16.88■□□□□ 0.29
COL22A1-202ENST00000341807 ASXL1Q8IXJ9 1541 aa16.88■□□□□ 0.29
COL22A1-202ENST00000341807 SEC24BO95487 1268 aa16.88■□□□□ 0.29
COL22A1-202ENST00000341807 CDC42BPBQ9Y5S2 1711 aa16.88■□□□□ 0.29
COL22A1-202ENST00000341807 STAC3Q96MF2 364 aa16.86■□□□□ 0.29
COL22A1-202ENST00000341807 PREX2Q70Z35 1606 aa16.86■□□□□ 0.29
COL22A1-202ENST00000341807 PDE3AQ14432 1141 aa16.86■□□□□ 0.29
COL22A1-202ENST00000341807 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
COL22A1-202ENST00000341807 TSR2Q969E8 191 aaKnown RBP16.85■□□□□ 0.29
COL22A1-202ENST00000341807 EIF2AK4Q9P2K8 1649 aaKnown RBP16.85■□□□□ 0.29
COL22A1-202ENST00000341807 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
COL22A1-202ENST00000341807 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
COL22A1-202ENST00000341807 PMFBP1Q8TBY8 1022 aa16.84■□□□□ 0.29
COL22A1-202ENST00000341807 ITPRIPQ8IWB1 547 aa16.84■□□□□ 0.29
COL22A1-202ENST00000341807 PDZRN3Q9UPQ7 1066 aa16.84■□□□□ 0.29
COL22A1-202ENST00000341807 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
COL22A1-202ENST00000341807 ERCC6L2Q5T890 1561 aa16.83■□□□□ 0.29
COL22A1-202ENST00000341807 MFAP1P55081 439 aaKnown RBP16.83■□□□□ 0.29
COL22A1-202ENST00000341807 RWDD1Q9H446 243 aaPredicted RBP16.83■□□□□ 0.29
COL22A1-202ENST00000341807 RARSP54136 660 aaKnown RBP16.83■□□□□ 0.28
COL22A1-202ENST00000341807 RLBP1P12271 317 aa16.83■□□□□ 0.28
COL22A1-202ENST00000341807 GZF1Q9H116 711 aaPredicted RBP16.83■□□□□ 0.28
COL22A1-202ENST00000341807 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
COL22A1-202ENST00000341807 E9PCH4 1651 aa16.82■□□□□ 0.28
COL22A1-202ENST00000341807 MYH16Q9H6N6 1097 aa16.82■□□□□ 0.28
COL22A1-202ENST00000341807 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
COL22A1-202ENST00000341807 MAST1Q9Y2H9 1570 aa16.82■□□□□ 0.28
COL22A1-202ENST00000341807 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
COL22A1-202ENST00000341807 INSRP06213 1382 aa16.8■□□□□ 0.28
COL22A1-202ENST00000341807 POGKQ9P215 609 aa16.8■□□□□ 0.28
COL22A1-202ENST00000341807 ATP10AO60312 1499 aa16.8■□□□□ 0.28
COL22A1-202ENST00000341807 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
COL22A1-202ENST00000341807 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
COL22A1-202ENST00000341807 NOS1P29475 1434 aa16.78■□□□□ 0.28
COL22A1-202ENST00000341807 ABCC2Q92887 1545 aa16.78■□□□□ 0.28
COL22A1-202ENST00000341807 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
COL22A1-202ENST00000341807 MINK1Q8N4C8 1332 aaPredicted RBP16.77■□□□□ 0.28
COL22A1-202ENST00000341807 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
COL22A1-202ENST00000341807 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.28
COL22A1-202ENST00000341807 EXOSC9Q06265 439 aaKnown RBP16.77■□□□□ 0.28
COL22A1-202ENST00000341807 UNC13BO14795 1591 aa16.77■□□□□ 0.27
COL22A1-202ENST00000341807 DZIP1LQ8IYY4 767 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms