RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 OS9Q13438 667 aaPredicted RBP17.1■□□□□ 0.33
TMEM248-201ENST00000341567 NCOA1Q15788 1441 aa17.09■□□□□ 0.33
TMEM248-201ENST00000341567 PPP2R1AP30153 589 aa17.09■□□□□ 0.33
TMEM248-201ENST00000341567 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
TMEM248-201ENST00000341567 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM248-201ENST00000341567 ZNF330Q9Y3S2 320 aaPredicted RBP17.09■□□□□ 0.33
TMEM248-201ENST00000341567 NECTIN2Q92692 538 aa17.08■□□□□ 0.33
TMEM248-201ENST00000341567 PTMAP06454 111 aaKnown RBP17.08■□□□□ 0.32
TMEM248-201ENST00000341567 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
TMEM248-201ENST00000341567 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
TMEM248-201ENST00000341567 ARID3AQ99856 593 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 PRAM1Q96QH2 718 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 PTPN23Q9H3S7 1636 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 MFAP1P55081 439 aaKnown RBP17.07■□□□□ 0.32
TMEM248-201ENST00000341567 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 CAMSAP2Q08AD1 1489 aa17.07■□□□□ 0.32
TMEM248-201ENST00000341567 MS4A1P11836 297 aa17.06■□□□□ 0.32
TMEM248-201ENST00000341567 DNTTIP2Q5QJE6 756 aaKnown RBP17.06■□□□□ 0.32
TMEM248-201ENST00000341567 TXNDC2Q86VQ3 553 aa17.06■□□□□ 0.32
TMEM248-201ENST00000341567 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
TMEM248-201ENST00000341567 CSB-PGBD3P0DP91 1061 aa17.06■□□□□ 0.32
TMEM248-201ENST00000341567 RIPK4P57078 832 aa17.05■□□□□ 0.32
TMEM248-201ENST00000341567 SKAP1Q86WV1 359 aa17.05■□□□□ 0.32
TMEM248-201ENST00000341567 COG3Q96JB2 828 aa17.05■□□□□ 0.32
TMEM248-201ENST00000341567 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
TMEM248-201ENST00000341567 FOXD4L1Q9NU39 408 aa17.04■□□□□ 0.32
TMEM248-201ENST00000341567 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
TMEM248-201ENST00000341567 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
TMEM248-201ENST00000341567 TCP11L2Q8N4U5 519 aa17.04■□□□□ 0.32
TMEM248-201ENST00000341567 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
TMEM248-201ENST00000341567 E9PSI1 815 aa17.03■□□□□ 0.32
TMEM248-201ENST00000341567 DIAPH1O60610 1272 aaKnown RBP17.02■□□□□ 0.32
TMEM248-201ENST00000341567 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.32
TMEM248-201ENST00000341567 MAPKBP1O60336 1514 aa17.02■□□□□ 0.32
TMEM248-201ENST00000341567 NUP160Q12769 1436 aa17.02■□□□□ 0.31
TMEM248-201ENST00000341567 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
TMEM248-201ENST00000341567 BCAR3O75815 825 aa17.01■□□□□ 0.31
TMEM248-201ENST00000341567 UGGT2Q9NYU1 1516 aa17.01■□□□□ 0.31
TMEM248-201ENST00000341567 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
TMEM248-201ENST00000341567 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
TMEM248-201ENST00000341567 PLEKHH2Q8IVE3 1493 aa17■□□□□ 0.31
TMEM248-201ENST00000341567 CENPQQ7L2Z9 268 aaPredicted RBP17■□□□□ 0.31
TMEM248-201ENST00000341567 CABP1Q9NZU7 370 aa17■□□□□ 0.31
TMEM248-201ENST00000341567 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
TMEM248-201ENST00000341567 GOLGA6L3A6NEY3 463 aa16.99■□□□□ 0.31
TMEM248-201ENST00000341567 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
TMEM248-201ENST00000341567 MAP3K1Q13233 1512 aa16.98■□□□□ 0.31
TMEM248-201ENST00000341567 GPATCH8Q9UKJ3 1502 aaKnown RBP16.98■□□□□ 0.31
TMEM248-201ENST00000341567 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
TMEM248-201ENST00000341567 BRD4O60885 1362 aaPredicted RBP16.98■□□□□ 0.31
TMEM248-201ENST00000341567 CEP170Q5SW79 1584 aa16.98■□□□□ 0.31
TMEM248-201ENST00000341567 NUP153P49790 1475 aaKnown RBP16.96■□□□□ 0.31
TMEM248-201ENST00000341567 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
TMEM248-201ENST00000341567 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
TMEM248-201ENST00000341567 RUNDC1Q96C34 613 aa16.96■□□□□ 0.31
TMEM248-201ENST00000341567 ZNF428Q96B54 188 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 STK31Q9BXU1 1019 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 ATP10BO94823 1461 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 FRAT2O75474 233 aaPredicted RBP16.95■□□□□ 0.3
TMEM248-201ENST00000341567 KCNJ4P48050 445 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 RBM33Q96EV2 1170 aaKnown RBP16.95■□□□□ 0.3
TMEM248-201ENST00000341567 CCDC141Q6ZP82 1450 aa16.95■□□□□ 0.3
TMEM248-201ENST00000341567 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
TMEM248-201ENST00000341567 ANKRD45Q5TZF3 282 aa16.94■□□□□ 0.3
TMEM248-201ENST00000341567 NOL8Q76FK4 1167 aaKnown RBP16.94■□□□□ 0.3
TMEM248-201ENST00000341567 FBLN1P23142 703 aa16.93■□□□□ 0.3
TMEM248-201ENST00000341567 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
TMEM248-201ENST00000341567 CALD1Q05682 793 aaKnown RBP16.93■□□□□ 0.3
TMEM248-201ENST00000341567 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
TMEM248-201ENST00000341567 MSNP26038 577 aaKnown RBP16.92■□□□□ 0.3
TMEM248-201ENST00000341567 IDI1Q13907 227 aa16.92■□□□□ 0.3
TMEM248-201ENST00000341567 CDK19Q9BWU1 502 aa16.92■□□□□ 0.3
TMEM248-201ENST00000341567 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
TMEM248-201ENST00000341567 KIAA0556O60303 1618 aa16.92■□□□□ 0.3
TMEM248-201ENST00000341567 NAP1L2Q9ULW6 460 aaPredicted RBP16.92■□□□□ 0.3
TMEM248-201ENST00000341567 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
TMEM248-201ENST00000341567 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
TMEM248-201ENST00000341567 DISP1Q96F81 1524 aa16.9■□□□□ 0.3
TMEM248-201ENST00000341567 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
TMEM248-201ENST00000341567 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
TMEM248-201ENST00000341567 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
TMEM248-201ENST00000341567 NLRP6P59044 892 aa16.89■□□□□ 0.29
TMEM248-201ENST00000341567 RRS1Q15050 365 aaKnown RBP16.89■□□□□ 0.29
TMEM248-201ENST00000341567 CHD1O14646 1710 aa16.89■□□□□ 0.29
TMEM248-201ENST00000341567 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
TMEM248-201ENST00000341567 C20orf194Q5TEA3 1177 aa16.89■□□□□ 0.29
TMEM248-201ENST00000341567 DZIP1LQ8IYY4 767 aaKnown RBP16.89■□□□□ 0.29
TMEM248-201ENST00000341567 LNPKQ9C0E8 428 aa16.88■□□□□ 0.29
TMEM248-201ENST00000341567 TRIM6-TRIM34B2RNG4 842 aa16.88■□□□□ 0.29
TMEM248-201ENST00000341567 THUMPD2Q9BTF0 503 aaKnown RBP16.88■□□□□ 0.29
TMEM248-201ENST00000341567 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
TMEM248-201ENST00000341567 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
TMEM248-201ENST00000341567 GBP4Q96PP9 640 aa16.87■□□□□ 0.29
TMEM248-201ENST00000341567 PSME1Q06323 249 aa16.87■□□□□ 0.29
TMEM248-201ENST00000341567 CHMP3Q9Y3E7 222 aa16.86■□□□□ 0.29
TMEM248-201ENST00000341567 FGD1P98174 961 aa16.86■□□□□ 0.29
TMEM248-201ENST00000341567 VSIG10Q8N0Z9 540 aa16.86■□□□□ 0.29
TMEM248-201ENST00000341567 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms