RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 PCMTD1Q96MG8 357 aaPredicted RBP9.09□□□□□ -0.95
LMO7-202ENST00000341547 C22orf23Q9BZE7 217 aa9.09□□□□□ -0.95
LMO7-202ENST00000341547 RRP12Q5JTH9 1297 aaKnown RBP9.09□□□□□ -0.95
LMO7-202ENST00000341547 GRPEL1Q9HAV7 217 aa9.09□□□□□ -0.95
LMO7-202ENST00000341547 CUX2O14529 1486 aa9.09□□□□□ -0.95
LMO7-202ENST00000341547 MROH2BQ7Z745 1585 aa9.09□□□□□ -0.95
LMO7-202ENST00000341547 MLECQ14165 292 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 SKIDA1Q1XH10 827 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 ZKSCAN2Q63HK3 967 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 BICD2Q8TD16 824 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 UQCRHLA0A096LP55 91 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 UQCRHP07919 91 aa9.08□□□□□ -0.96
LMO7-202ENST00000341547 LETM1O95202 739 aaPredicted RBP9.08□□□□□ -0.96
LMO7-202ENST00000341547 RNF214Q8ND24 703 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 USP47Q96K76 1375 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 BRD4O60885 1362 aaPredicted RBP9.07□□□□□ -0.96
LMO7-202ENST00000341547 MAPK8IP2Q13387 824 aaPredicted RBP9.07□□□□□ -0.96
LMO7-202ENST00000341547 PDCL3Q9H2J4 239 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 KANK1Q14678 1352 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 ANKRD30AQ9BXX3 1397 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 FOSBP53539 338 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 RUFY1Q96T51 708 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 RAPGEF2Q9Y4G8 1499 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 ESPNB1AK53 854 aa9.07□□□□□ -0.96
LMO7-202ENST00000341547 SASS6Q6UVJ0 657 aa9.06□□□□□ -0.96
LMO7-202ENST00000341547 MNS1Q8NEH6 495 aa9.06□□□□□ -0.96
LMO7-202ENST00000341547 ACBD3Q9H3P7 528 aa9.06□□□□□ -0.96
LMO7-202ENST00000341547 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
LMO7-202ENST00000341547 DDX19BQ9UMR2 479 aa9.05□□□□□ -0.96
LMO7-202ENST00000341547 H0YHG0 523 aa9.05□□□□□ -0.96
LMO7-202ENST00000341547 REC8O95072 547 aa9.05□□□□□ -0.96
LMO7-202ENST00000341547 VPS37CA5D8V6 355 aaPredicted RBP9.05□□□□□ -0.96
LMO7-202ENST00000341547 TSPY26PQ9H489 355 aa9.05□□□□□ -0.96
LMO7-202ENST00000341547 AKAP17AQ02040 695 aaKnown RBP9.04□□□□□ -0.96
LMO7-202ENST00000341547 MBD3O95983 291 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 HSP90B2PQ58FF3 399 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 EIF4G1Q04637 1599 aaKnown RBP9.04□□□□□ -0.96
LMO7-202ENST00000341547 CSB-PGBD3P0DP91 1061 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 TTLL5Q6EMB2 1281 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 GGT6Q6P531 493 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 AK7Q96M32 723 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 NAP1L1P55209 391 aaKnown RBP9.04□□□□□ -0.96
LMO7-202ENST00000341547 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
LMO7-202ENST00000341547 ZMYND15Q9H091 742 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.962e-10■■■■■ 34.8
LMO7-202ENST00000341547 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 TSPYL1Q9H0U9 437 aa9.04□□□□□ -0.96
LMO7-202ENST00000341547 PLCD4Q9BRC7 762 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 NUP155O75694 1391 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 AKNAQ7Z591 1439 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 ANO2Q9NQ90 1003 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 KIF7Q2M1P5 1343 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 NINLQ9Y2I6 1382 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 UACAQ9BZF9 1416 aa9.03□□□□□ -0.96
LMO7-202ENST00000341547 RDXP35241 583 aaKnown RBP9.02□□□□□ -0.97
LMO7-202ENST00000341547 CAVIN1Q6NZI2 390 aaKnown RBP9.02□□□□□ -0.97
LMO7-202ENST00000341547 LMOD3Q0VAK6 560 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 ZSCAN30Q86W11 494 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 DHX37Q8IY37 1157 aaKnown RBP9.02□□□□□ -0.97
LMO7-202ENST00000341547 PANK3Q9H999 370 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 MPNDQ8N594 471 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 LNPKQ9C0E8 428 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 WIZO95785 1651 aa9.02□□□□□ -0.97
LMO7-202ENST00000341547 INTS3Q68E01 1043 aaKnown RBP9.02□□□□□ -0.97
LMO7-202ENST00000341547 PDILTQ8N807 584 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 SMC3Q9UQE7 1217 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 RRBP1Q9P2E9 1410 aaKnown RBP9.01□□□□□ -0.97
LMO7-202ENST00000341547 HSP90AB3PQ58FF7 597 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 ANKRD20A12PQ8NF67 263 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 NECTIN2Q92692 538 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 TRIM29Q14134 588 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 NUTM2DQ5VT03 806 aaPredicted RBP9.01□□□□□ -0.97
LMO7-202ENST00000341547 SPC24Q8NBT2 197 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 WASHC2AQ641Q2 1341 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 DZIP1LQ8IYY4 767 aaKnown RBP9.01□□□□□ -0.97
LMO7-202ENST00000341547 KIF21BO75037 1637 aa9.01□□□□□ -0.97
LMO7-202ENST00000341547 CIZ1Q9ULV3 898 aaPredicted RBP9.01□□□□□ -0.97
LMO7-202ENST00000341547 APAF1O14727 1248 aa9□□□□□ -0.97
LMO7-202ENST00000341547 MCM4P33991 863 aa9□□□□□ -0.97
LMO7-202ENST00000341547 CHMP4AQ9BY43 222 aa9□□□□□ -0.97
LMO7-202ENST00000341547 PDCL2Q8N4E4 241 aa9□□□□□ -0.97
LMO7-202ENST00000341547 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
LMO7-202ENST00000341547 CCP110O43303 1012 aa9□□□□□ -0.97
LMO7-202ENST00000341547 SYNE3Q6ZMZ3 975 aa9□□□□□ -0.97
LMO7-202ENST00000341547 MIA2Q96PC5 1412 aa9□□□□□ -0.97
LMO7-202ENST00000341547 KAT6BQ8WYB5 2073 aa9□□□□□ -0.97
LMO7-202ENST00000341547 G3V3G9 751 aa9□□□□□ -0.97
LMO7-202ENST00000341547 CDC45O75419 566 aa9□□□□□ -0.97
LMO7-202ENST00000341547 DCAF8Q5TAQ9 597 aa9□□□□□ -0.97
LMO7-202ENST00000341547 ZKSCAN1P17029 563 aaPredicted RBP8.99□□□□□ -0.97
LMO7-202ENST00000341547 LEKR1Q6ZMV7 388 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 CCDC191Q8NCU4 936 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 ROCK1Q13464 1354 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
LMO7-202ENST00000341547 HOOK1Q9UJC3 728 aaKnown RBP8.99□□□□□ -0.97
LMO7-202ENST00000341547 AMPHP49418 695 aa8.99□□□□□ -0.97
LMO7-202ENST00000341547 CPLX2Q6PUV4 134 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms