RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
PERM1-201ENST00000341290 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
PERM1-201ENST00000341290 LMTK2Q8IWU2 1503 aa20.38■□□□□ 0.85
PERM1-201ENST00000341290 ARID4BQ4LE39 1312 aaPredicted RBP20.38■□□□□ 0.85
PERM1-201ENST00000341290 YEATS2Q9ULM3 1422 aa20.38■□□□□ 0.85
PERM1-201ENST00000341290 TRHP20396 242 aaPredicted RBP20.37■□□□□ 0.85
PERM1-201ENST00000341290 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.37■□□□□ 0.85
PERM1-201ENST00000341290 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
PERM1-201ENST00000341290 IPO9Q96P70 1041 aaKnown RBP20.37■□□□□ 0.85
PERM1-201ENST00000341290 RALGAPBQ86X10 1494 aa20.36■□□□□ 0.85
PERM1-201ENST00000341290 PLIN1O60240 522 aa20.36■□□□□ 0.85
PERM1-201ENST00000341290 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
PERM1-201ENST00000341290 SKAP1Q86WV1 359 aa20.35■□□□□ 0.85
PERM1-201ENST00000341290 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
PERM1-201ENST00000341290 RAPGEF3O95398 923 aa20.34■□□□□ 0.85
PERM1-201ENST00000341290 RALBP1Q15311 655 aa20.34■□□□□ 0.85
PERM1-201ENST00000341290 MROH2AA6NES4 1674 aa20.32■□□□□ 0.84
PERM1-201ENST00000341290 TET3O43151 1660 aa20.32■□□□□ 0.84
PERM1-201ENST00000341290 LRPPRCP42704 1394 aaKnown RBP20.32■□□□□ 0.84
PERM1-201ENST00000341290 BRD4O60885 1362 aaPredicted RBP20.32■□□□□ 0.84
PERM1-201ENST00000341290 IL27Q8NEV9 243 aa20.32■□□□□ 0.84
PERM1-201ENST00000341290 NLRP13Q86W25 1043 aa20.29■□□□□ 0.84
PERM1-201ENST00000341290 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
PERM1-201ENST00000341290 CEP152O94986 1710 aa20.26■□□□□ 0.83
PERM1-201ENST00000341290 CAMSAP1Q5T5Y3 1602 aa20.25■□□□□ 0.83
PERM1-201ENST00000341290 PANK3Q9H999 370 aa20.24■□□□□ 0.83
PERM1-201ENST00000341290 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
PERM1-201ENST00000341290 ADAMTSL3P82987 1691 aa20.24■□□□□ 0.83
PERM1-201ENST00000341290 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
PERM1-201ENST00000341290 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
PERM1-201ENST00000341290 ABCC3O15438 1527 aa20.23■□□□□ 0.83
PERM1-201ENST00000341290 CCDC144AA2RUR9 1427 aa20.23■□□□□ 0.83
PERM1-201ENST00000341290 PDE4AP27815 886 aa20.22■□□□□ 0.83
PERM1-201ENST00000341290 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
PERM1-201ENST00000341290 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
PERM1-201ENST00000341290 E9PCH4 1651 aa20.22■□□□□ 0.83
PERM1-201ENST00000341290 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
PERM1-201ENST00000341290 PARD3Q8TEW0 1356 aa20.19■□□□□ 0.82
PERM1-201ENST00000341290 ARHGAP31Q2M1Z3 1444 aa20.19■□□□□ 0.82
PERM1-201ENST00000341290 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
PERM1-201ENST00000341290 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
PERM1-201ENST00000341290 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
PERM1-201ENST00000341290 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
PERM1-201ENST00000341290 SPHKAPQ2M3C7 1700 aa20.17■□□□□ 0.82
PERM1-201ENST00000341290 TCERG1O14776 1098 aaKnown RBP20.16■□□□□ 0.82
PERM1-201ENST00000341290 TESK2Q96S53 571 aa20.16■□□□□ 0.82
PERM1-201ENST00000341290 NEURL4Q96JN8 1562 aa20.16■□□□□ 0.82
PERM1-201ENST00000341290 CLTCQ00610 1675 aaKnown RBP20.16■□□□□ 0.82
PERM1-201ENST00000341290 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
PERM1-201ENST00000341290 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
PERM1-201ENST00000341290 BACH2Q9BYV9 841 aa20.13■□□□□ 0.81
PERM1-201ENST00000341290 ADAMTS8Q9UP79 889 aa20.13■□□□□ 0.81
PERM1-201ENST00000341290 PLA2R1Q13018 1463 aa20.13■□□□□ 0.81
PERM1-201ENST00000341290 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
PERM1-201ENST00000341290 PREX1Q8TCU6 1659 aa20.11■□□□□ 0.81
PERM1-201ENST00000341290 PTPRTO14522 1441 aa20.1■□□□□ 0.81
PERM1-201ENST00000341290 TMF1P82094 1093 aa20.1■□□□□ 0.81
PERM1-201ENST00000341290 KDM5AP29375 1690 aaKnown RBP20.09■□□□□ 0.81
PERM1-201ENST00000341290 TRPM2O94759 1503 aa20.09■□□□□ 0.81
PERM1-201ENST00000341290 NEFMP07197 916 aa20.09■□□□□ 0.81
PERM1-201ENST00000341290 KANK1Q14678 1352 aa20.09■□□□□ 0.81
PERM1-201ENST00000341290 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
PERM1-201ENST00000341290 UBE2Q2Q8WVN8 375 aa20.08■□□□□ 0.81
PERM1-201ENST00000341290 C3P01024 1663 aa20.08■□□□□ 0.81
PERM1-201ENST00000341290 SLC4A3P48751 1232 aa20.08■□□□□ 0.8
PERM1-201ENST00000341290 GPRASP1Q5JY77 1395 aa20.06■□□□□ 0.8
PERM1-201ENST00000341290 LAMC1P11047 1609 aa20.05■□□□□ 0.8
PERM1-201ENST00000341290 MADDQ8WXG6 1647 aa20.05■□□□□ 0.8
PERM1-201ENST00000341290 KIF3BO15066 747 aa20.05■□□□□ 0.8
PERM1-201ENST00000341290 NOS1P29475 1434 aa20.04■□□□□ 0.8
PERM1-201ENST00000341290 CCDC146Q8IYE0 955 aa20.04■□□□□ 0.8
PERM1-201ENST00000341290 EIF5BO60841 1220 aaKnown RBP20.03■□□□□ 0.8
PERM1-201ENST00000341290 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
PERM1-201ENST00000341290 KNSTRNQ9Y448 316 aa20.03■□□□□ 0.8
PERM1-201ENST00000341290 SYNMO15061 1565 aa20.02■□□□□ 0.8
PERM1-201ENST00000341290 MS4A1P11836 297 aa20.02■□□□□ 0.79
PERM1-201ENST00000341290 RIMS1Q86UR5 1692 aaKnown RBP20.01■□□□□ 0.79
PERM1-201ENST00000341290 NPATQ14207 1427 aa20.01■□□□□ 0.79
PERM1-201ENST00000341290 PPP2R1AP30153 589 aa20■□□□□ 0.79
PERM1-201ENST00000341290 PLEKHH1Q9ULM0 1364 aa20■□□□□ 0.79
PERM1-201ENST00000341290 BLMP54132 1417 aaPredicted RBP19.99■□□□□ 0.79
PERM1-201ENST00000341290 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
PERM1-201ENST00000341290 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
PERM1-201ENST00000341290 ERVK-7P63135 1459 aa19.98■□□□□ 0.79
PERM1-201ENST00000341290 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
PERM1-201ENST00000341290 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
PERM1-201ENST00000341290 RGS3P49796 1198 aa19.97■□□□□ 0.79
PERM1-201ENST00000341290 KIF1BO60333 1816 aa19.97■□□□□ 0.79
PERM1-201ENST00000341290 DUSP27Q5VZP5 1158 aa19.96■□□□□ 0.79
PERM1-201ENST00000341290 GOLGA2Q08379 1002 aa19.93■□□□□ 0.78
PERM1-201ENST00000341290 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
PERM1-201ENST00000341290 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
PERM1-201ENST00000341290 ADGRB3O60242 1522 aa19.91■□□□□ 0.78
PERM1-201ENST00000341290 APAF1O14727 1248 aa19.9■□□□□ 0.78
PERM1-201ENST00000341290 TMEM131LA2VDJ0 1609 aa19.9■□□□□ 0.78
PERM1-201ENST00000341290 MYO3AQ8NEV4 1616 aa19.9■□□□□ 0.78
PERM1-201ENST00000341290 BCAR3O75815 825 aa19.89■□□□□ 0.78
PERM1-201ENST00000341290 KDM2BQ8NHM5 1336 aa19.89■□□□□ 0.78
PERM1-201ENST00000341290 DAXXQ9UER7 740 aaPredicted RBP19.89■□□□□ 0.77
PERM1-201ENST00000341290 ZMYM3Q14202 1370 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms