RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
TRERF1-201ENST00000340840 C14orf37Q86TY3 774 aa12.07□□□□□ -0.48
TRERF1-201ENST00000340840 FTSJ3Q8IY81 847 aaKnown RBP12.06□□□□□ -0.48
TRERF1-201ENST00000340840 COL17A1Q9UMD9 1497 aaPredicted RBP12.06□□□□□ -0.48
TRERF1-201ENST00000340840 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
TRERF1-201ENST00000340840 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
TRERF1-201ENST00000340840 L1TD1Q5T7N2 865 aaKnown RBP12.06□□□□□ -0.48
TRERF1-201ENST00000340840 SLKQ9H2G2 1235 aaPredicted RBP12.05□□□□□ -0.48
TRERF1-201ENST00000340840 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
TRERF1-201ENST00000340840 ARXQ96QS3 562 aa12.04□□□□□ -0.48
TRERF1-201ENST00000340840 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-201ENST00000340840 BLMP54132 1417 aaPredicted RBP12.04□□□□□ -0.48
TRERF1-201ENST00000340840 NUP160Q12769 1436 aa12.04□□□□□ -0.48
TRERF1-201ENST00000340840 COG6Q9Y2V7 657 aa12.04□□□□□ -0.48
TRERF1-201ENST00000340840 PDE3AQ14432 1141 aa12.04□□□□□ -0.48
TRERF1-201ENST00000340840 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
TRERF1-201ENST00000340840 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
TRERF1-201ENST00000340840 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
TRERF1-201ENST00000340840 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.48
TRERF1-201ENST00000340840 ANO8Q9HCE9 1232 aaPredicted RBP12.02□□□□□ -0.49
TRERF1-201ENST00000340840 BCAR3O75815 825 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 AAMPQ13685 434 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 HSP90AA1P07900 732 aaKnown RBP12.01□□□□□ -0.49
TRERF1-201ENST00000340840 MYH16Q9H6N6 1097 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 KDM5DQ9BY66 1539 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 A2MP01023 1474 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 ZMYM4Q5VZL5 1548 aa12.01□□□□□ -0.49
TRERF1-201ENST00000340840 KIF3BO15066 747 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 EIF2AK4Q9P2K8 1649 aaKnown RBP12□□□□□ -0.49
TRERF1-201ENST00000340840 NINLQ9Y2I6 1382 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 CEP170Q5SW79 1584 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 RAPGEF3O95398 923 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 ABCC10Q5T3U5 1492 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
TRERF1-201ENST00000340840 KDM2BQ8NHM5 1336 aa12□□□□□ -0.49
TRERF1-201ENST00000340840 PANK1Q8TE04 598 aa11.99□□□□□ -0.49
TRERF1-201ENST00000340840 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
TRERF1-201ENST00000340840 PLEKHH1Q9ULM0 1364 aa11.99□□□□□ -0.49
TRERF1-201ENST00000340840 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
TRERF1-201ENST00000340840 C8orf34Q49A92 452 aa11.98□□□□□ -0.49
TRERF1-201ENST00000340840 RRP7AQ9Y3A4 280 aaKnown RBP11.98□□□□□ -0.49
TRERF1-201ENST00000340840 ARHGEF5Q12774 1597 aa11.98□□□□□ -0.49
TRERF1-201ENST00000340840 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
TRERF1-201ENST00000340840 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
TRERF1-201ENST00000340840 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.49
TRERF1-201ENST00000340840 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
TRERF1-201ENST00000340840 CROCC2H7BZ55 1655 aa11.97□□□□□ -0.49
TRERF1-201ENST00000340840 SCAF11Q99590 1463 aaKnown RBP11.97□□□□□ -0.49
TRERF1-201ENST00000340840 HSCBQ8IWL3 235 aa11.97□□□□□ -0.49
TRERF1-201ENST00000340840 PLEKHG5O94827 1062 aa11.96□□□□□ -0.5
TRERF1-201ENST00000340840 SYCP2Q9BX26 1530 aa11.96□□□□□ -0.5
TRERF1-201ENST00000340840 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.5
TRERF1-201ENST00000340840 PIK3C2GO75747 1445 aa11.95□□□□□ -0.5
TRERF1-201ENST00000340840 CFAP70Q5T0N1 1121 aa11.95□□□□□ -0.5
TRERF1-201ENST00000340840 U2SURPO15042 1029 aaKnown RBP11.95□□□□□ -0.5
TRERF1-201ENST00000340840 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
TRERF1-201ENST00000340840 ASXL1Q8IXJ9 1541 aa11.95□□□□□ -0.5
TRERF1-201ENST00000340840 ANP32BQ92688 251 aaKnown RBP11.94□□□□□ -0.5
TRERF1-201ENST00000340840 RSPH6AQ9H0K4 717 aa11.94□□□□□ -0.5
TRERF1-201ENST00000340840 GOLGA6L3A6NEY3 463 aa11.94□□□□□ -0.5
TRERF1-201ENST00000340840 ZKSCAN2Q63HK3 967 aa11.94□□□□□ -0.5
TRERF1-201ENST00000340840 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
TRERF1-201ENST00000340840 DUOX2Q9NRD8 1548 aa11.94□□□□□ -0.5
TRERF1-201ENST00000340840 SMC4Q9NTJ3 1288 aa11.93□□□□□ -0.5
TRERF1-201ENST00000340840 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
TRERF1-201ENST00000340840 TCP11L2Q8N4U5 519 aa11.93□□□□□ -0.5
TRERF1-201ENST00000340840 MFAP1P55081 439 aaKnown RBP11.93□□□□□ -0.5
TRERF1-201ENST00000340840 AFAP1Q8N556 730 aa11.93□□□□□ -0.5
TRERF1-201ENST00000340840 ABCA8O94911 1581 aa11.92□□□□□ -0.5
TRERF1-201ENST00000340840 GLIPR1L2Q4G1C9 344 aa11.92□□□□□ -0.5
TRERF1-201ENST00000340840 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
TRERF1-201ENST00000340840 NPC1L1Q9UHC9 1359 aa11.92□□□□□ -0.5
TRERF1-201ENST00000340840 IPO8O15397 1037 aaKnown RBP11.92□□□□□ -0.5
TRERF1-201ENST00000340840 TRIM44Q96DX7 344 aaPredicted RBP11.92□□□□□ -0.5
TRERF1-201ENST00000340840 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
TRERF1-201ENST00000340840 PNNQ9H307 717 aaKnown RBP11.91□□□□□ -0.5
TRERF1-201ENST00000340840 PDZRN3Q9UPQ7 1066 aa11.91□□□□□ -0.5
TRERF1-201ENST00000340840 FAM43AQ8N2R8 423 aa11.91□□□□□ -0.5
TRERF1-201ENST00000340840 GZF1Q9H116 711 aaPredicted RBP11.91□□□□□ -0.5
TRERF1-201ENST00000340840 CHMP4BQ9H444 224 aaKnown RBP11.91□□□□□ -0.5
TRERF1-201ENST00000340840 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
TRERF1-201ENST00000340840 IGHDP01880 384 aa11.91□□□□□ -0.5
TRERF1-201ENST00000340840 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
TRERF1-201ENST00000340840 WDR63Q8IWG1 891 aa11.9□□□□□ -0.5
TRERF1-201ENST00000340840 DZIP1LQ8IYY4 767 aaKnown RBP11.9□□□□□ -0.5
TRERF1-201ENST00000340840 TRPM1Q7Z4N2 1603 aa11.9□□□□□ -0.5
TRERF1-201ENST00000340840 GOLGA6L22H0YM25 854 aa11.9□□□□□ -0.5
TRERF1-201ENST00000340840 ZNF521Q96K83 1311 aa11.9□□□□□ -0.51
TRERF1-201ENST00000340840 PLA2R1Q13018 1463 aa11.9□□□□□ -0.51
TRERF1-201ENST00000340840 CHMP5Q9NZZ3 219 aa11.89□□□□□ -0.51
TRERF1-201ENST00000340840 NAP1L5Q96NT1 182 aaPredicted RBP11.89□□□□□ -0.51
TRERF1-201ENST00000340840 CD109Q6YHK3 1445 aa11.89□□□□□ -0.51
TRERF1-201ENST00000340840 MTHFSP49914 203 aa11.88□□□□□ -0.51
TRERF1-201ENST00000340840 RARSP54136 660 aaKnown RBP11.88□□□□□ -0.51
TRERF1-201ENST00000340840 DDX19BQ9UMR2 479 aa11.88□□□□□ -0.51
TRERF1-201ENST00000340840 MAGI2Q86UL8 1455 aa11.88□□□□□ -0.51
TRERF1-201ENST00000340840 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
TRERF1-201ENST00000340840 C22orf23Q9BZE7 217 aa11.87□□□□□ -0.51
TRERF1-201ENST00000340840 SAMD9LQ8IVG5 1584 aa11.87□□□□□ -0.51
TRERF1-201ENST00000340840 DDX11L8A8MPP1 907 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms