RNA–Protein interactions for RNA: ENST00000340480.8

HIPK1-201, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 6,997 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-201ENST00000340480 IPO8O15397 1037 aaKnown RBP9.78□□□□□ -0.84
HIPK1-201ENST00000340480 NPHP1O15259 732 aa9.77□□□□□ -0.84
HIPK1-201ENST00000340480 PPM1GO15355 546 aaPredicted RBP9.77□□□□□ -0.84
HIPK1-201ENST00000340480 ATAD2Q6PL18 1390 aa9.77□□□□□ -0.85
HIPK1-201ENST00000340480 NEUROD2Q15784 382 aa9.77□□□□□ -0.85
HIPK1-201ENST00000340480 NEO1Q92859 1461 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
HIPK1-201ENST00000340480 PREX2Q70Z35 1606 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.76□□□□□ -0.85
HIPK1-201ENST00000340480 MAST1Q9Y2H9 1570 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 KDM5DQ9BY66 1539 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 AAMPQ13685 434 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 PNISRQ8TF01 805 aaKnown RBP9.76□□□□□ -0.85
HIPK1-201ENST00000340480 RAPGEF3O95398 923 aa9.76□□□□□ -0.85
HIPK1-201ENST00000340480 MYO5CQ9NQX4 1742 aa9.75□□□□□ -0.85
HIPK1-201ENST00000340480 ATP7AQ04656 1500 aa9.75□□□□□ -0.85
HIPK1-201ENST00000340480 B4GALNT3Q6L9W6 998 aa9.75□□□□□ -0.85
HIPK1-201ENST00000340480 CFAP74Q9C0B2 1584 aa9.75□□□□□ -0.85
HIPK1-201ENST00000340480 NINLQ9Y2I6 1382 aa9.74□□□□□ -0.85
HIPK1-201ENST00000340480 SMG6Q86US8 1419 aaKnown RBP9.74□□□□□ -0.85
HIPK1-201ENST00000340480 GPRASP1Q5JY77 1395 aa9.74□□□□□ -0.85
HIPK1-201ENST00000340480 CFAP44Q96MT7 982 aa9.74□□□□□ -0.85
HIPK1-201ENST00000340480 PUS7Q96PZ0 661 aaKnown RBP9.74□□□□□ -0.85
HIPK1-201ENST00000340480 CHD1O14646 1710 aa9.74□□□□□ -0.85
HIPK1-201ENST00000340480 RRP1P56182 461 aaKnown RBP9.73□□□□□ -0.85
HIPK1-201ENST00000340480 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
HIPK1-201ENST00000340480 BECN1Q14457 450 aa9.73□□□□□ -0.85
HIPK1-201ENST00000340480 RUNDC1Q96C34 613 aa9.72□□□□□ -0.85
HIPK1-201ENST00000340480 SENP3Q9H4L4 574 aaPredicted RBP9.72□□□□□ -0.85
HIPK1-201ENST00000340480 MINK1Q8N4C8 1332 aaPredicted RBP9.72□□□□□ -0.85
HIPK1-201ENST00000340480 SAMD9LQ8IVG5 1584 aa9.72□□□□□ -0.85
HIPK1-201ENST00000340480 FRAT1Q92837 279 aaPredicted RBP9.72□□□□□ -0.85
HIPK1-201ENST00000340480 NSD2O96028 1365 aa9.72□□□□□ -0.85
HIPK1-201ENST00000340480 ABCC1P33527 1531 aa9.72□□□□□ -0.85
HIPK1-201ENST00000340480 NUTM2DQ5VT03 806 aaPredicted RBP9.71□□□□□ -0.85
HIPK1-201ENST00000340480 COG3Q96JB2 828 aa9.71□□□□□ -0.85
HIPK1-201ENST00000340480 ARXQ96QS3 562 aa9.71□□□□□ -0.85
HIPK1-201ENST00000340480 PLXNC1O60486 1568 aa9.71□□□□□ -0.86
HIPK1-201ENST00000340480 C11orf95C9JLR9 678 aaPredicted RBP9.71□□□□□ -0.86
HIPK1-201ENST00000340480 C14orf93Q9H972 538 aaKnown RBP9.71□□□□□ -0.86
HIPK1-201ENST00000340480 PMFBP1Q8TBY8 1022 aa9.71□□□□□ -0.86
HIPK1-201ENST00000340480 RWDD1Q9H446 243 aaPredicted RBP9.7□□□□□ -0.86
HIPK1-201ENST00000340480 DIAPH1O60610 1272 aaKnown RBP9.69□□□□□ -0.86
HIPK1-201ENST00000340480 RTF1Q92541 710 aaKnown RBP9.69□□□□□ -0.86
HIPK1-201ENST00000340480 ATP10AO60312 1499 aa9.69□□□□□ -0.86
HIPK1-201ENST00000340480 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
HIPK1-201ENST00000340480 NOS1P29475 1434 aa9.68□□□□□ -0.86
HIPK1-201ENST00000340480 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
HIPK1-201ENST00000340480 NGDNQ8NEJ9 315 aaKnown RBP9.68□□□□□ -0.86
HIPK1-201ENST00000340480 INSRP06213 1382 aa9.68□□□□□ -0.86
HIPK1-201ENST00000340480 APAF1O14727 1248 aa9.68□□□□□ -0.86
HIPK1-201ENST00000340480 TTC37Q6PGP7 1564 aa9.68□□□□□ -0.86
HIPK1-201ENST00000340480 CENPQQ7L2Z9 268 aaPredicted RBP9.68□□□□□ -0.86
HIPK1-201ENST00000340480 THEMISQ8N1K5 641 aaPredicted RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 COL17A1Q9UMD9 1497 aaPredicted RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 ZNF692Q9BU19 519 aaPredicted RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 RBM19Q9Y4C8 960 aaKnown RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 NPC1L1Q9UHC9 1359 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 CT47B1P0C2W7 299 aaPredicted RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 MLH3Q9UHC1 1453 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 ZCCHC11Q5TAX3 1644 aaKnown RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 SENP3-EIF4A1A0A087X0R7 540 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
HIPK1-201ENST00000340480 SPATA31E1Q6ZUB1 1445 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 ADGRF5Q8IZF2 1346 aa9.67□□□□□ -0.86
HIPK1-201ENST00000340480 CCDC146Q8IYE0 955 aa9.66□□□□□ -0.86
HIPK1-201ENST00000340480 ADAMTS8Q9UP79 889 aa9.66□□□□□ -0.86
HIPK1-201ENST00000340480 PARD3Q8TEW0 1356 aa9.66□□□□□ -0.86
HIPK1-201ENST00000340480 SHROOM2Q13796 1616 aa9.66□□□□□ -0.86
HIPK1-201ENST00000340480 CDC42BPAQ5VT25 1732 aa9.66□□□□□ -0.86
HIPK1-201ENST00000340480 PRAM1Q96QH2 718 aa9.65□□□□□ -0.86
HIPK1-201ENST00000340480 CASC1Q6TDU7 716 aa9.65□□□□□ -0.86
HIPK1-201ENST00000340480 IDI1Q13907 227 aa9.65□□□□□ -0.86
HIPK1-201ENST00000340480 ANP32EQ9BTT0 268 aa9.65□□□□□ -0.86
HIPK1-201ENST00000340480 SMC4Q9NTJ3 1288 aa9.65□□□□□ -0.87
HIPK1-201ENST00000340480 HDAC5Q9UQL6 1122 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.64□□□□□ -0.87
HIPK1-201ENST00000340480 TESK2Q96S53 571 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
HIPK1-201ENST00000340480 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 CROCC2H7BZ55 1655 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 DISP3Q9P2K9 1392 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 ZKSCAN2Q63HK3 967 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 LMOD2Q6P5Q4 547 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 SBNO2Q9Y2G9 1366 aa9.64□□□□□ -0.87
HIPK1-201ENST00000340480 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 TRPM2O94759 1503 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 MAGI2Q86UL8 1455 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 KDM6BO15054 1643 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 MTHFSP49914 203 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 ZRSR1Q15695 479 aaKnown RBP9.63□□□□□ -0.87
HIPK1-201ENST00000340480 WDR63Q8IWG1 891 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 SLC12A5Q9H2X9 1139 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 KIF16BQ96L93 1317 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 RGS3P49796 1198 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 NOP58Q9Y2X3 529 aaKnown RBP9.63□□□□□ -0.87
HIPK1-201ENST00000340480 ASXL1Q8IXJ9 1541 aa9.63□□□□□ -0.87
HIPK1-201ENST00000340480 PTPRTO14522 1441 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms