RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.56
RET-201ENST00000340058 HSCBQ8IWL3 235 aa18.58■□□□□ 0.56
RET-201ENST00000340058 CALD1Q05682 793 aaKnown RBP18.57■□□□□ 0.56
RET-201ENST00000340058 NAP1L2Q9ULW6 460 aaPredicted RBP18.57■□□□□ 0.56
RET-201ENST00000340058 SUPT6HQ7KZ85 1726 aaKnown RBP18.56■□□□□ 0.56
RET-201ENST00000340058 MAGI1Q96QZ7 1491 aaPredicted RBP18.56■□□□□ 0.56
RET-201ENST00000340058 NCOA1Q15788 1441 aa18.56■□□□□ 0.56
RET-201ENST00000340058 PMFBP1Q8TBY8 1022 aa18.55■□□□□ 0.56
RET-201ENST00000340058 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
RET-201ENST00000340058 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
RET-201ENST00000340058 ZKSCAN2Q63HK3 967 aa18.54■□□□□ 0.56
RET-201ENST00000340058 NOL8Q76FK4 1167 aaKnown RBP18.54■□□□□ 0.56
RET-201ENST00000340058 SKAP1Q86WV1 359 aa18.54■□□□□ 0.56
RET-201ENST00000340058 BCAR3O75815 825 aa18.53■□□□□ 0.56
RET-201ENST00000340058 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
RET-201ENST00000340058 FGD1P98174 961 aa18.53■□□□□ 0.56
RET-201ENST00000340058 CAMSAP2Q08AD1 1489 aa18.53■□□□□ 0.56
RET-201ENST00000340058 ANKRD45Q5TZF3 282 aa18.53■□□□□ 0.56
RET-201ENST00000340058 BRD4O60885 1362 aaPredicted RBP18.53■□□□□ 0.56
RET-201ENST00000340058 PLCB2Q00722 1185 aa18.52■□□□□ 0.56
RET-201ENST00000340058 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
RET-201ENST00000340058 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
RET-201ENST00000340058 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.55
RET-201ENST00000340058 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
RET-201ENST00000340058 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
RET-201ENST00000340058 CENPQQ7L2Z9 268 aaPredicted RBP18.51■□□□□ 0.55
RET-201ENST00000340058 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
RET-201ENST00000340058 ROCK1Q13464 1354 aa18.5■□□□□ 0.55
RET-201ENST00000340058 TRIM44Q96DX7 344 aaPredicted RBP18.49■□□□□ 0.55
RET-201ENST00000340058 TRIM6-TRIM34B2RNG4 842 aa18.49■□□□□ 0.55
RET-201ENST00000340058 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
RET-201ENST00000340058 NPHP1O15259 732 aa18.48■□□□□ 0.55
RET-201ENST00000340058 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
RET-201ENST00000340058 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
RET-201ENST00000340058 CHMP3Q9Y3E7 222 aa18.48■□□□□ 0.55
RET-201ENST00000340058 DZIP1LQ8IYY4 767 aaKnown RBP18.47■□□□□ 0.55
RET-201ENST00000340058 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
RET-201ENST00000340058 PRKAR2BP31323 418 aa18.46■□□□□ 0.55
RET-201ENST00000340058 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
RET-201ENST00000340058 LMOD3Q0VAK6 560 aa18.46■□□□□ 0.55
RET-201ENST00000340058 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
RET-201ENST00000340058 LNPKQ9C0E8 428 aa18.45■□□□□ 0.54
RET-201ENST00000340058 NLRP6P59044 892 aa18.45■□□□□ 0.54
RET-201ENST00000340058 STAC3Q96MF2 364 aa18.45■□□□□ 0.54
RET-201ENST00000340058 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
RET-201ENST00000340058 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
RET-201ENST00000340058 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
RET-201ENST00000340058 CUL7Q14999 1698 aa18.44■□□□□ 0.54
RET-201ENST00000340058 EXOSC9Q06265 439 aaKnown RBP18.44■□□□□ 0.54
RET-201ENST00000340058 FOXD4L5Q5VV16 416 aaPredicted RBP18.44■□□□□ 0.54
RET-201ENST00000340058 FOXD4L4Q8WXT5 416 aaPredicted RBP18.44■□□□□ 0.54
RET-201ENST00000340058 PSME1Q06323 249 aa18.43■□□□□ 0.54
RET-201ENST00000340058 MAP3K1Q13233 1512 aa18.43■□□□□ 0.54
RET-201ENST00000340058 CCDC141Q6ZP82 1450 aa18.43■□□□□ 0.54
RET-201ENST00000340058 MAPKBP1O60336 1514 aa18.43■□□□□ 0.54
RET-201ENST00000340058 RBM33Q96EV2 1170 aaKnown RBP18.42■□□□□ 0.54
RET-201ENST00000340058 GPATCH8Q9UKJ3 1502 aaKnown RBP18.42■□□□□ 0.54
RET-201ENST00000340058 PTMAP06454 111 aaKnown RBP18.41■□□□□ 0.54
RET-201ENST00000340058 TEFQ10587 303 aa18.41■□□□□ 0.54
RET-201ENST00000340058 IDI1Q13907 227 aa18.41■□□□□ 0.54
RET-201ENST00000340058 RRS1Q15050 365 aaKnown RBP18.41■□□□□ 0.54
RET-201ENST00000340058 THUMPD2Q9BTF0 503 aaKnown RBP18.39■□□□□ 0.54
RET-201ENST00000340058 FBLN1P23142 703 aa18.39■□□□□ 0.53
RET-201ENST00000340058 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
RET-201ENST00000340058 C20orf194Q5TEA3 1177 aa18.38■□□□□ 0.53
RET-201ENST00000340058 FOXD4L6Q3SYB3 417 aaPredicted RBP18.38■□□□□ 0.53
RET-201ENST00000340058 FOXD4L3Q6VB84 417 aaPredicted RBP18.38■□□□□ 0.53
RET-201ENST00000340058 RILPL2Q969X0 211 aa18.38■□□□□ 0.53
RET-201ENST00000340058 KIAA1211Q6ZU35 1233 aa18.38■□□□□ 0.53
RET-201ENST00000340058 ATP10BO94823 1461 aa18.37■□□□□ 0.53
RET-201ENST00000340058 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
RET-201ENST00000340058 CEBPAP49715 358 aaPredicted RBP18.37■□□□□ 0.53
RET-201ENST00000340058 HMMRO75330 724 aa18.37■□□□□ 0.53
RET-201ENST00000340058 FKBP5Q13451 457 aaPredicted RBP18.37■□□□□ 0.53
RET-201ENST00000340058 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.37■□□□□ 0.53
RET-201ENST00000340058 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
RET-201ENST00000340058 RPRD2Q5VT52 1461 aaKnown RBP18.36■□□□□ 0.53
RET-201ENST00000340058 TSPYL4Q9UJ04 414 aa18.35■□□□□ 0.53
RET-201ENST00000340058 CD109Q6YHK3 1445 aa18.35■□□□□ 0.53
RET-201ENST00000340058 SULT6B1Q6IMI4 303 aa18.35■□□□□ 0.53
RET-201ENST00000340058 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
RET-201ENST00000340058 MCCP23508 829 aa18.34■□□□□ 0.53
RET-201ENST00000340058 XPCQ01831 940 aaPredicted RBP18.34■□□□□ 0.53
RET-201ENST00000340058 ABTB2Q8N961 1025 aa18.33■□□□□ 0.53
RET-201ENST00000340058 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
RET-201ENST00000340058 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
RET-201ENST00000340058 GNAI1P63096 354 aa18.3■□□□□ 0.52
RET-201ENST00000340058 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
RET-201ENST00000340058 USP35Q9P2H5 1018 aa18.3■□□□□ 0.52
RET-201ENST00000340058 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
RET-201ENST00000340058 ADGRL1O94910 1474 aa18.3■□□□□ 0.52
RET-201ENST00000340058 NLRP2Q9NX02 1062 aa18.3■□□□□ 0.52
RET-201ENST00000340058 FANCIQ9NVI1 1328 aa18.29■□□□□ 0.52
RET-201ENST00000340058 AIMP1Q12904 312 aaKnown RBP18.29■□□□□ 0.52
RET-201ENST00000340058 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
RET-201ENST00000340058 GORABQ5T7V8 394 aa18.28■□□□□ 0.52
RET-201ENST00000340058 WWC1Q8IX03 1113 aa18.28■□□□□ 0.52
RET-201ENST00000340058 DNTTIP2Q5QJE6 756 aaKnown RBP18.27■□□□□ 0.52
RET-201ENST00000340058 NOB1Q9ULX3 412 aaKnown RBP18.27■□□□□ 0.52
RET-201ENST00000340058 GOLGA6L4A6NEF3 574 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms