RNA–Protein interactions for RNA: ENST00000339844.6

ZNF28-201, Transcript of zinc finger protein 28, humanhuman

TSL 4 BASIC

Gene ZNF28, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-201ENST00000339844 RIMS1Q86UR5 1692 aaKnown RBP9.16□□□□□ -0.94
ZNF28-201ENST00000339844 NCOA1Q15788 1441 aa9.15□□□□□ -0.94
ZNF28-201ENST00000339844 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.15□□□□□ -0.94
ZNF28-201ENST00000339844 KIF3BO15066 747 aa9.15□□□□□ -0.94
ZNF28-201ENST00000339844 ITGAEP38570 1179 aa9.15□□□□□ -0.94
ZNF28-201ENST00000339844 GGT6Q6P531 493 aa9.15□□□□□ -0.94
ZNF28-201ENST00000339844 BBXQ8WY36 941 aaPredicted RBP9.15□□□□□ -0.94
ZNF28-201ENST00000339844 ADGRL2O95490 1459 aa9.15□□□□□ -0.95
ZNF28-201ENST00000339844 FER1L4A9Z1Z3 1794 aa9.14□□□□□ -0.95
ZNF28-201ENST00000339844 ANKRD30AQ9BXX3 1397 aa9.13□□□□□ -0.95
ZNF28-201ENST00000339844 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
ZNF28-201ENST00000339844 CEBPAP49715 358 aaPredicted RBP9.13□□□□□ -0.95
ZNF28-201ENST00000339844 DUOX2Q9NRD8 1548 aa9.13□□□□□ -0.95
ZNF28-201ENST00000339844 CD44P16070 742 aaKnown RBP9.12□□□□□ -0.95
ZNF28-201ENST00000339844 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
ZNF28-201ENST00000339844 RNF25Q96BH1 459 aaPredicted RBP9.12□□□□□ -0.95
ZNF28-201ENST00000339844 ZRANB1Q9UGI0 708 aa9.12□□□□□ -0.95
ZNF28-201ENST00000339844 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
ZNF28-201ENST00000339844 MROH1Q8NDA8 1641 aa9.11□□□□□ -0.95
ZNF28-201ENST00000339844 ERBINQ96RT1 1412 aa9.11□□□□□ -0.95
ZNF28-201ENST00000339844 ROCK1Q13464 1354 aa9.11□□□□□ -0.95
ZNF28-201ENST00000339844 RNF17Q9BXT8 1623 aaKnown RBP9.1□□□□□ -0.95
ZNF28-201ENST00000339844 EIF2AK4Q9P2K8 1649 aaKnown RBP9.1□□□□□ -0.95
ZNF28-201ENST00000339844 STK25O00506 426 aa9.1□□□□□ -0.95
ZNF28-201ENST00000339844 CFAP44Q96MT7 982 aa9.1□□□□□ -0.95
ZNF28-201ENST00000339844 ESF1Q9H501 851 aaKnown RBP9.1□□□□□ -0.95
ZNF28-201ENST00000339844 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
ZNF28-201ENST00000339844 CNTLNQ9NXG0 1405 aa9.1□□□□□ -0.95
ZNF28-201ENST00000339844 DHX57Q6P158 1386 aaKnown RBP9.1□□□□□ -0.95
ZNF28-201ENST00000339844 ANKRD50Q9ULJ7 1429 aa9.09□□□□□ -0.95
ZNF28-201ENST00000339844 PAXIP1Q6ZW49 1069 aaPredicted RBP9.09□□□□□ -0.95
ZNF28-201ENST00000339844 CCDC61Q9Y6R9 512 aa9.09□□□□□ -0.95
ZNF28-201ENST00000339844 CLTCQ00610 1675 aaKnown RBP9.09□□□□□ -0.95
ZNF28-201ENST00000339844 ZMYM3Q14202 1370 aa9.09□□□□□ -0.95
ZNF28-201ENST00000339844 C3P01024 1663 aa9.08□□□□□ -0.96
ZNF28-201ENST00000339844 HAP1P54257 671 aaPredicted RBP9.08□□□□□ -0.96
ZNF28-201ENST00000339844 HS6ST3Q8IZP7 471 aa9.08□□□□□ -0.96
ZNF28-201ENST00000339844 WASHC2CQ9Y4E1 1318 aa9.07□□□□□ -0.96
ZNF28-201ENST00000339844 ABCC3O15438 1527 aa9.07□□□□□ -0.96
ZNF28-201ENST00000339844 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
ZNF28-201ENST00000339844 KDM5DQ9BY66 1539 aa9.07□□□□□ -0.96
ZNF28-201ENST00000339844 MROH2AA6NES4 1674 aa9.07□□□□□ -0.96
ZNF28-201ENST00000339844 DEPDC5O75140 1603 aa9.06□□□□□ -0.96
ZNF28-201ENST00000339844 GABBR2O75899 941 aa9.06□□□□□ -0.96
ZNF28-201ENST00000339844 SPRYD3Q8NCJ5 442 aa9.06□□□□□ -0.96
ZNF28-201ENST00000339844 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
ZNF28-201ENST00000339844 STK24Q9Y6E0 443 aa9.06□□□□□ -0.96
ZNF28-201ENST00000339844 NAIPQ13075 1403 aa9.05□□□□□ -0.96
ZNF28-201ENST00000339844 FAM135AQ9P2D6 1515 aa9.05□□□□□ -0.96
ZNF28-201ENST00000339844 LMTK3Q96Q04 1460 aa9.05□□□□□ -0.96
ZNF28-201ENST00000339844 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.05□□□□□ -0.96
ZNF28-201ENST00000339844 FBXO31Q5XUX0 539 aaPredicted RBP9.05□□□□□ -0.96
ZNF28-201ENST00000339844 ZFP91Q96JP5 570 aaPredicted RBP9.05□□□□□ -0.96
ZNF28-201ENST00000339844 CEP152O94986 1710 aa9.05□□□□□ -0.96
ZNF28-201ENST00000339844 VWDEQ8N2E2 1590 aa9.04□□□□□ -0.96
ZNF28-201ENST00000339844 PZPP20742 1482 aa9.04□□□□□ -0.96
ZNF28-201ENST00000339844 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
ZNF28-201ENST00000339844 BCL11BQ9C0K0 894 aaPredicted RBP9.04□□□□□ -0.96
ZNF28-201ENST00000339844 PCDHB8Q9UN66 801 aa9.04□□□□□ -0.96
ZNF28-201ENST00000339844 HSPA2P54652 639 aa9.03□□□□□ -0.96
ZNF28-201ENST00000339844 PDAP1Q13442 181 aaKnown RBP9.03□□□□□ -0.96
ZNF28-201ENST00000339844 ZNF579Q8NAF0 562 aaKnown RBP9.03□□□□□ -0.96
ZNF28-201ENST00000339844 HFM1A2PYH4 1435 aa9.03□□□□□ -0.96
ZNF28-201ENST00000339844 NPATQ14207 1427 aa9.03□□□□□ -0.96
ZNF28-201ENST00000339844 ZC3H13Q5T200 1668 aaKnown RBP9.03□□□□□ -0.96
ZNF28-201ENST00000339844 UNC13BO14795 1591 aa9.03□□□□□ -0.96
ZNF28-201ENST00000339844 CAMSAP1Q5T5Y3 1602 aa9.02□□□□□ -0.96
ZNF28-201ENST00000339844 KANK1Q14678 1352 aa9.02□□□□□ -0.97
ZNF28-201ENST00000339844 LMTK2Q8IWU2 1503 aa9.02□□□□□ -0.97
ZNF28-201ENST00000339844 SETD1BQ9UPS6 1966 aaKnown RBP9.02□□□□□ -0.97
ZNF28-201ENST00000339844 GCC2Q8IWJ2 1684 aa9.01□□□□□ -0.97
ZNF28-201ENST00000339844 MAP3K13O43283 966 aa9.01□□□□□ -0.97
ZNF28-201ENST00000339844 ARHGAP31Q2M1Z3 1444 aa9.01□□□□□ -0.97
ZNF28-201ENST00000339844 UHRF1BP1Q6BDS2 1440 aa9.01□□□□□ -0.97
ZNF28-201ENST00000339844 SGIP1Q9BQI5 828 aa9.01□□□□□ -0.97
ZNF28-201ENST00000339844 NUP155O75694 1391 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 TNRQ92752 1358 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 KIF12Q96FN5 646 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 PHF12Q96QT6 1004 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 ERVK-7P63135 1459 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 PREX1Q8TCU6 1659 aa9□□□□□ -0.97
ZNF28-201ENST00000339844 SPATA31D1Q6ZQQ2 1576 aa8.99□□□□□ -0.97
ZNF28-201ENST00000339844 PSEN1P49768 467 aa8.99□□□□□ -0.97
ZNF28-201ENST00000339844 CFAP65Q6ZU64 1925 aaKnown RBP8.99□□□□□ -0.97
ZNF28-201ENST00000339844 EFCAB6Q5THR3 1501 aa8.99□□□□□ -0.97
ZNF28-201ENST00000339844 IQGAP3Q86VI3 1631 aa8.98□□□□□ -0.97
ZNF28-201ENST00000339844 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
ZNF28-201ENST00000339844 IFNL1Q8IU54 200 aa8.98□□□□□ -0.97
ZNF28-201ENST00000339844 TET3O43151 1660 aa8.97□□□□□ -0.97
ZNF28-201ENST00000339844 SETD5Q9C0A6 1442 aa8.97□□□□□ -0.97
ZNF28-201ENST00000339844 YTHDC1Q96MU7 727 aaKnown RBP8.97□□□□□ -0.97
ZNF28-201ENST00000339844 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
ZNF28-201ENST00000339844 NOS1P29475 1434 aa8.97□□□□□ -0.97
ZNF28-201ENST00000339844 A2ML1A8K2U0 1454 aa8.96□□□□□ -0.97
ZNF28-201ENST00000339844 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
ZNF28-201ENST00000339844 RYDENQ9NUL5 291 aaKnown RBP8.96□□□□□ -0.98
ZNF28-201ENST00000339844 SYNMO15061 1565 aa8.95□□□□□ -0.98
ZNF28-201ENST00000339844 E9PCH4 1651 aa8.95□□□□□ -0.98
ZNF28-201ENST00000339844 ZNF142P52746 1687 aaPredicted RBP8.95□□□□□ -0.98
ZNF28-201ENST00000339844 RAB3GAP2Q9H2M9 1393 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms